Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC-0.62□□□□□ -2.51
LINC00643Q86TS7 AL606517.1-201ENST00000446914 387 ntBASIC-0.62□□□□□ -2.51
LINC00643Q86TS7 SPAG11B-206ENST00000458665 444 ntTSL 5 BASIC-0.62□□□□□ -2.51
LINC00643Q86TS7 RNU6-1132P-201ENST00000459214 107 ntBASIC-0.62□□□□□ -2.51
LINC00643Q86TS7 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC-0.62□□□□□ -2.51
LINC00643Q86TS7 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC-0.62□□□□□ -2.51
LINC00643Q86TS7 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC-0.62□□□□□ -2.51
LINC00643Q86TS7 AC121161.1-201ENST00000510606 652 ntBASIC-0.62□□□□□ -2.51
LINC00643Q86TS7 RNU5F-2P-201ENST00000516066 82 ntBASIC-0.62□□□□□ -2.51
LINC00643Q86TS7 SNORA31.19-201ENST00000517079 126 ntBASIC-0.62□□□□□ -2.51
LINC00643Q86TS7 AF235103.2-201ENST00000525753 346 ntBASIC-0.62□□□□□ -2.51
LINC00643Q86TS7 RBM7-208ENST00000545678 867 ntTSL 3 BASIC-0.62□□□□□ -2.51
LINC00643Q86TS7 SNHG14-219ENST00000553134 470 ntTSL 2 BASIC-0.62□□□□□ -2.51
LINC00643Q86TS7 AC122134.1-202ENST00000569111 1201 ntBASIC-0.62□□□□□ -2.51
LINC00643Q86TS7 MIR8076-201ENST00000611401 83 ntBASIC-0.62□□□□□ -2.51
LINC00643Q86TS7 AC022709.1-201ENST00000615967 87 ntBASIC-0.62□□□□□ -2.51
LINC00643Q86TS7 AC015726.2-201ENST00000620112 122 ntBASIC-0.62□□□□□ -2.51
LINC00643Q86TS7 AC106730.3-201ENST00000624568 641 ntBASIC-0.62□□□□□ -2.51
LINC00643Q86TS7 AC004808.1-201ENST00000627671 721 ntBASIC-0.62□□□□□ -2.51
LINC00643Q86TS7 MTND4P21-201ENST00000453886 1357 ntBASIC-0.62□□□□□ -2.51
LINC00643Q86TS7 AL161781.1-201ENST00000354277 403 ntBASIC-0.63□□□□□ -2.51
LINC00643Q86TS7 RNU6-28P-201ENST00000362378 107 ntBASIC-0.63□□□□□ -2.51
LINC00643Q86TS7 RNY1P10-201ENST00000363268 113 ntBASIC-0.63□□□□□ -2.51
LINC00643Q86TS7 Y_RNA.234-201ENST00000364409 97 ntBASIC-0.63□□□□□ -2.51
LINC00643Q86TS7 RNU4-76P-201ENST00000364509 141 ntBASIC-0.63□□□□□ -2.51
LINC00643Q86TS7 RNU6-1031P-201ENST00000384773 107 ntBASIC-0.63□□□□□ -2.51
LINC00643Q86TS7 MIR634-201ENST00000385208 97 ntBASIC-0.63□□□□□ -2.51
LINC00643Q86TS7 MIR653-201ENST00000385279 96 ntBASIC-0.63□□□□□ -2.51
LINC00643Q86TS7 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC-0.63□□□□□ -2.51
LINC00643Q86TS7 AL162399.1-201ENST00000426090 130 ntTSL 3 BASIC-0.63□□□□□ -2.51
LINC00643Q86TS7 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-0.63□□□□□ -2.51
LINC00643Q86TS7 AC079776.3-201ENST00000450665 370 ntBASIC-0.63□□□□□ -2.51
LINC00643Q86TS7 snoU13.8-201ENST00000458890 104 ntBASIC-0.63□□□□□ -2.51
LINC00643Q86TS7 AC010469.2-201ENST00000496412 480 ntBASIC-0.63□□□□□ -2.51
LINC00643Q86TS7 ATP5EP1-201ENST00000510257 156 ntBASIC-0.63□□□□□ -2.51
LINC00643Q86TS7 RNU6ATAC22P-201ENST00000516794 89 ntBASIC-0.63□□□□□ -2.51
LINC00643Q86TS7 AC023824.3-201ENST00000569003 562 ntBASIC-0.63□□□□□ -2.51
LINC00643Q86TS7 MTND1P15-201ENST00000579262 949 ntBASIC-0.63□□□□□ -2.51
LINC00643Q86TS7 AC008147.4-201ENST00000617570 1204 ntBASIC-0.63□□□□□ -2.51
LINC00643Q86TS7 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC-0.63□□□□□ -2.51
LINC00643Q86TS7 MIR18A-201ENST00000362310 71 ntBASIC-0.64□□□□□ -2.51
LINC00643Q86TS7 SNORD114-23-201ENST00000363536 72 ntBASIC-0.64□□□□□ -2.51
LINC00643Q86TS7 RNA5SP517-201ENST00000364724 117 ntBASIC-0.64□□□□□ -2.51
LINC00643Q86TS7 RNA5SP323-201ENST00000391094 133 ntBASIC-0.64□□□□□ -2.51
LINC00643Q86TS7 AL451046.2-201ENST00000403074 277 ntBASIC-0.64□□□□□ -2.51
LINC00643Q86TS7 AL139396.1-201ENST00000421137 167 ntBASIC-0.64□□□□□ -2.51
LINC00643Q86TS7 AC060773.1-201ENST00000421698 310 ntBASIC-0.64□□□□□ -2.51
LINC00643Q86TS7 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC-0.64□□□□□ -2.51
LINC00643Q86TS7 MIR4298-201ENST00000584380 73 ntBASIC-0.64□□□□□ -2.51
LINC00643Q86TS7 AC091946.2-201ENST00000606105 291 ntBASIC-0.64□□□□□ -2.51
LINC00643Q86TS7 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-0.64□□□□□ -2.51
LINC00643Q86TS7 SNORA72.2-201ENST00000365028 127 ntBASIC-0.65□□□□□ -2.51
LINC00643Q86TS7 RNU6-929P-201ENST00000384429 107 ntBASIC-0.65□□□□□ -2.51
LINC00643Q86TS7 MIR106A-201ENST00000384870 81 ntBASIC-0.65□□□□□ -2.51
LINC00643Q86TS7 MIR573-201ENST00000384964 99 ntBASIC-0.65□□□□□ -2.51
LINC00643Q86TS7 MIR214-201ENST00000385214 110 ntBASIC-0.65□□□□□ -2.51
LINC00643Q86TS7 RNU6-1319P-201ENST00000390855 104 ntBASIC-0.65□□□□□ -2.51
LINC00643Q86TS7 RNU6-747P-201ENST00000390928 104 ntBASIC-0.65□□□□□ -2.51
LINC00643Q86TS7 RNU6-241P-201ENST00000391148 104 ntBASIC-0.65□□□□□ -2.51
LINC00643Q86TS7 AL603865.2-201ENST00000401679 213 ntBASIC-0.65□□□□□ -2.51
LINC00643Q86TS7 MTND1P9-201ENST00000453775 944 ntBASIC-0.65□□□□□ -2.51
LINC00643Q86TS7 SNORD4A-201ENST00000459174 72 ntBASIC-0.65□□□□□ -2.51
LINC00643Q86TS7 BLNK-209ENST00000495266 440 ntTSL 5 BASIC-0.65□□□□□ -2.51
LINC00643Q86TS7 AC108043.1-201ENST00000512696 574 ntBASIC-0.65□□□□□ -2.51
LINC00643Q86TS7 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-0.65□□□□□ -2.51
LINC00643Q86TS7 RNU6-1096P-201ENST00000517089 102 ntBASIC-0.65□□□□□ -2.51
LINC00643Q86TS7 AC090049.2-201ENST00000550377 109 ntBASIC-0.65□□□□□ -2.51
LINC00643Q86TS7 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC-0.65□□□□□ -2.51
LINC00643Q86TS7 AC004223.2-201ENST00000590309 544 ntBASIC-0.65□□□□□ -2.51
LINC00643Q86TS7 AC138749.5-201ENST00000611461 208 ntBASIC-0.65□□□□□ -2.51
LINC00643Q86TS7 AL391903.3-201ENST00000612158 163 ntBASIC-0.65□□□□□ -2.51
LINC00643Q86TS7 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC-0.65□□□□□ -2.51
LINC00643Q86TS7 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC-0.65□□□□□ -2.51
LINC00643Q86TS7 Y_RNA.551-201ENST00000384661 102 ntBASIC-0.66□□□□□ -2.52
LINC00643Q86TS7 MIR643-201ENST00000385267 97 ntBASIC-0.66□□□□□ -2.52
LINC00643Q86TS7 RPL21P1-201ENST00000399532 476 ntBASIC-0.66□□□□□ -2.52
LINC00643Q86TS7 FCF1P10-201ENST00000407590 479 ntBASIC-0.66□□□□□ -2.52
LINC00643Q86TS7 RNA5SP390-201ENST00000410191 113 ntBASIC-0.66□□□□□ -2.52
LINC00643Q86TS7 AC016831.2-201ENST00000417179 352 ntBASIC-0.66□□□□□ -2.52
LINC00643Q86TS7 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC-0.66□□□□□ -2.52
LINC00643Q86TS7 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC-0.66□□□□□ -2.52
LINC00643Q86TS7 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC-0.66□□□□□ -2.52
LINC00643Q86TS7 MTCO2P18-201ENST00000457151 658 ntBASIC-0.66□□□□□ -2.52
LINC00643Q86TS7 AC074133.1-201ENST00000515696 183 ntBASIC-0.66□□□□□ -2.52
LINC00643Q86TS7 HIGD1AP17-201ENST00000554576 276 ntBASIC-0.66□□□□□ -2.52
LINC00643Q86TS7 MIR4305-201ENST00000583252 102 ntBASIC-0.66□□□□□ -2.52
LINC00643Q86TS7 AL159153.1-201ENST00000619688 317 ntBASIC-0.66□□□□□ -2.52
LINC00643Q86TS7 AL603839.4-201ENST00000624658 1005 ntBASIC-0.66□□□□□ -2.52
LINC00643Q86TS7 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.66□□□□□ -2.52
LINC00643Q86TS7 RNU6-252P-201ENST00000363232 107 ntBASIC-0.67□□□□□ -2.52
LINC00643Q86TS7 RNA5SP99-201ENST00000364020 114 ntBASIC-0.67□□□□□ -2.52
LINC00643Q86TS7 SNORA32.2-201ENST00000384049 122 ntBASIC-0.67□□□□□ -2.52
LINC00643Q86TS7 RNU6-432P-201ENST00000384196 109 ntBASIC-0.67□□□□□ -2.52
LINC00643Q86TS7 SNORA12.2-201ENST00000391040 156 ntBASIC-0.67□□□□□ -2.52
LINC00643Q86TS7 AL133264.1-201ENST00000407157 562 ntBASIC-0.67□□□□□ -2.52
LINC00643Q86TS7 MTND1P21-201ENST00000412991 285 ntBASIC-0.67□□□□□ -2.52
LINC00643Q86TS7 AC016909.1-201ENST00000415916 166 ntBASIC-0.67□□□□□ -2.52
LINC00643Q86TS7 OFD1P4Y-201ENST00000455273 1179 ntBASIC-0.67□□□□□ -2.52
LINC00643Q86TS7 AC104692.1-201ENST00000472406 90 ntBASIC-0.67□□□□□ -2.52
LINC00643Q86TS7 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC-0.67□□□□□ -2.52
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms