Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.35□□□□□ -1.87
UBE3BQ7Z3V4 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC3.35□□□□□ -1.87
UBE3BQ7Z3V4 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.35□□□□□ -1.87
UBE3BQ7Z3V4 AC113195.1-201ENST00000579952 141 ntBASIC3.35□□□□□ -1.87
UBE3BQ7Z3V4 AL133393.1-201ENST00000603277 287 ntBASIC3.35□□□□□ -1.87
UBE3BQ7Z3V4 AL138825.1-201ENST00000618587 192 ntBASIC3.35□□□□□ -1.87
UBE3BQ7Z3V4 7SK.10-201ENST00000621414 298 ntBASIC3.35□□□□□ -1.87
UBE3BQ7Z3V4 AC138305.3-201ENST00000624988 240 ntBASIC3.35□□□□□ -1.87
UBE3BQ7Z3V4 AC091812.1-201ENST00000432235 1948 ntBASIC3.34□□□□□ -1.87
UBE3BQ7Z3V4 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
UBE3BQ7Z3V4 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
UBE3BQ7Z3V4 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.34□□□□□ -1.87
UBE3BQ7Z3V4 RNU4-42P-201ENST00000364738 142 ntBASIC3.34□□□□□ -1.87
UBE3BQ7Z3V4 SNORA14A-201ENST00000364773 135 ntBASIC3.34□□□□□ -1.87
UBE3BQ7Z3V4 MTCYBP9-201ENST00000431021 303 ntBASIC3.34□□□□□ -1.87
UBE3BQ7Z3V4 CHEK2P4-201ENST00000450340 246 ntBASIC3.34□□□□□ -1.87
UBE3BQ7Z3V4 AL353752.1-201ENST00000454946 260 ntBASIC3.34□□□□□ -1.87
UBE3BQ7Z3V4 RPS3P1-201ENST00000456781 192 ntBASIC3.34□□□□□ -1.87
UBE3BQ7Z3V4 RPL26P9-201ENST00000457466 433 ntBASIC3.34□□□□□ -1.87
UBE3BQ7Z3V4 RPS29P20-201ENST00000489592 171 ntBASIC3.34□□□□□ -1.87
UBE3BQ7Z3V4 MTCO2P24-201ENST00000515611 426 ntBASIC3.34□□□□□ -1.87
UBE3BQ7Z3V4 SNORA40.14-201ENST00000516543 86 ntBASIC3.34□□□□□ -1.87
UBE3BQ7Z3V4 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.34□□□□□ -1.87
UBE3BQ7Z3V4 CR383656.8-201ENST00000549046 145 ntBASIC3.34□□□□□ -1.87
UBE3BQ7Z3V4 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC3.34□□□□□ -1.87
UBE3BQ7Z3V4 AL138880.2-201ENST00000616214 239 ntBASIC3.34□□□□□ -1.87
UBE3BQ7Z3V4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.34□□□□□ -1.88
UBE3BQ7Z3V4 AC110491.1-201ENST00000562191 2010 ntBASIC3.34□□□□□ -1.88
UBE3BQ7Z3V4 AC110774.1-201ENST00000623567 2018 ntBASIC3.34□□□□□ -1.88
UBE3BQ7Z3V4 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
UBE3BQ7Z3V4 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
UBE3BQ7Z3V4 Y_RNA.153-201ENST00000363615 91 ntBASIC3.33□□□□□ -1.88
UBE3BQ7Z3V4 Y_RNA.485-201ENST00000384395 102 ntBASIC3.33□□□□□ -1.88
UBE3BQ7Z3V4 Y_RNA.557-201ENST00000384680 107 ntBASIC3.33□□□□□ -1.88
UBE3BQ7Z3V4 MIR568-201ENST00000385036 95 ntBASIC3.33□□□□□ -1.88
UBE3BQ7Z3V4 MIR625-201ENST00000385047 85 ntBASIC3.33□□□□□ -1.88
UBE3BQ7Z3V4 RNU6-823P-201ENST00000391042 103 ntBASIC3.33□□□□□ -1.88
UBE3BQ7Z3V4 Y_RNA.605-201ENST00000410577 105 ntBASIC3.33□□□□□ -1.88
UBE3BQ7Z3V4 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.33□□□□□ -1.88
UBE3BQ7Z3V4 AC124916.1-201ENST00000444020 547 ntBASIC3.33□□□□□ -1.88
UBE3BQ7Z3V4 AC096725.1-201ENST00000514266 313 ntBASIC3.33□□□□□ -1.88
UBE3BQ7Z3V4 AC022616.4-201ENST00000522985 181 ntBASIC3.33□□□□□ -1.88
UBE3BQ7Z3V4 AC004584.2-201ENST00000570407 410 ntBASIC3.33□□□□□ -1.88
UBE3BQ7Z3V4 AC016727.2-201ENST00000603988 621 ntBASIC3.33□□□□□ -1.88
UBE3BQ7Z3V4 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC3.33□□□□□ -1.88
UBE3BQ7Z3V4 AL132822.1-201ENST00000617063 513 ntBASIC3.33□□□□□ -1.88
UBE3BQ7Z3V4 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.33□□□□□ -1.88
UBE3BQ7Z3V4 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.33□□□□□ -1.88
UBE3BQ7Z3V4 RNU4-82P-201ENST00000362443 140 ntBASIC3.32□□□□□ -1.88
UBE3BQ7Z3V4 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.32□□□□□ -1.88
UBE3BQ7Z3V4 IPO7P1-201ENST00000442031 636 ntBASIC3.32□□□□□ -1.88
UBE3BQ7Z3V4 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.32□□□□□ -1.88
UBE3BQ7Z3V4 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.32□□□□□ -1.88
UBE3BQ7Z3V4 AC093852.1-201ENST00000503587 266 ntBASIC3.32□□□□□ -1.88
UBE3BQ7Z3V4 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.32□□□□□ -1.88
UBE3BQ7Z3V4 SNORA9.3-201ENST00000516383 129 ntBASIC3.32□□□□□ -1.88
UBE3BQ7Z3V4 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC3.32□□□□□ -1.88
UBE3BQ7Z3V4 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.32□□□□□ -1.88
UBE3BQ7Z3V4 MIR4635-201ENST00000583759 79 ntBASIC3.32□□□□□ -1.88
UBE3BQ7Z3V4 MTND4LP5-201ENST00000605152 292 ntBASIC3.32□□□□□ -1.88
UBE3BQ7Z3V4 MIR6817-201ENST00000615588 66 ntBASIC3.32□□□□□ -1.88
UBE3BQ7Z3V4 AC087588.2-201ENST00000617667 426 ntBASIC3.32□□□□□ -1.88
UBE3BQ7Z3V4 AC073308.1-201ENST00000623696 305 ntBASIC3.32□□□□□ -1.88
UBE3BQ7Z3V4 AC243829.7-201ENST00000633081 225 ntBASIC3.32□□□□□ -1.88
UBE3BQ7Z3V4 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
UBE3BQ7Z3V4 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
UBE3BQ7Z3V4 MAPK10-362ENST00000641864 4484 ntBASIC3.32□□□□□ -1.88
UBE3BQ7Z3V4 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
UBE3BQ7Z3V4 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.31□□□□□ -1.88
UBE3BQ7Z3V4 RNU6-527P-201ENST00000363425 104 ntBASIC3.31□□□□□ -1.88
UBE3BQ7Z3V4 Y_RNA.380-201ENST00000365663 111 ntBASIC3.31□□□□□ -1.88
UBE3BQ7Z3V4 Y_RNA.389-201ENST00000383924 113 ntBASIC3.31□□□□□ -1.88
UBE3BQ7Z3V4 RNU6-196P-201ENST00000384315 107 ntBASIC3.31□□□□□ -1.88
UBE3BQ7Z3V4 RNU6-700P-201ENST00000391043 107 ntBASIC3.31□□□□□ -1.88
UBE3BQ7Z3V4 SAR1AP2-201ENST00000392696 594 ntBASIC3.31□□□□□ -1.88
UBE3BQ7Z3V4 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
UBE3BQ7Z3V4 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
UBE3BQ7Z3V4 MTCYBP2-201ENST00000407745 171 ntBASIC3.31□□□□□ -1.88
UBE3BQ7Z3V4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
UBE3BQ7Z3V4 TRIAP1P1-201ENST00000427062 225 ntBASIC3.31□□□□□ -1.88
UBE3BQ7Z3V4 AC096644.2-201ENST00000429278 159 ntBASIC3.31□□□□□ -1.88
UBE3BQ7Z3V4 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
UBE3BQ7Z3V4 AC243964.1-201ENST00000441814 261 ntBASIC3.31□□□□□ -1.88
UBE3BQ7Z3V4 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.31□□□□□ -1.88
UBE3BQ7Z3V4 U8.20-201ENST00000459445 131 ntBASIC3.31□□□□□ -1.88
UBE3BQ7Z3V4 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC3.31□□□□□ -1.88
UBE3BQ7Z3V4 RPL23AP49-201ENST00000492925 468 ntBASIC3.31□□□□□ -1.88
UBE3BQ7Z3V4 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.31□□□□□ -1.88
UBE3BQ7Z3V4 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.31□□□□□ -1.88
UBE3BQ7Z3V4 RNA5SP76-201ENST00000516277 87 ntBASIC3.31□□□□□ -1.88
UBE3BQ7Z3V4 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.31□□□□□ -1.88
UBE3BQ7Z3V4 AC021739.1-201ENST00000559631 174 ntBASIC3.31□□□□□ -1.88
UBE3BQ7Z3V4 AC020895.1-201ENST00000595362 272 ntBASIC3.31□□□□□ -1.88
UBE3BQ7Z3V4 Z98751.3-201ENST00000604447 521 ntBASIC3.31□□□□□ -1.88
UBE3BQ7Z3V4 PRR13P7-201ENST00000605538 430 ntBASIC3.31□□□□□ -1.88
UBE3BQ7Z3V4 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.31□□□□□ -1.88
UBE3BQ7Z3V4 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.31□□□□□ -1.88
UBE3BQ7Z3V4 IGHVIII-44-202ENST00000636235 289 ntBASIC3.31□□□□□ -1.88
UBE3BQ7Z3V4 AC241585.2-209ENST00000638217 143 ntBASIC3.31□□□□□ -1.88
UBE3BQ7Z3V4 AC010680.1-201ENST00000590024 3590 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms