Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
SHFQ7M4L6 SNORA26.3-201ENST00000391119 136 ntBASIC2.51□□□□□ -2.01
SHFQ7M4L6 MIR548P-201ENST00000408336 84 ntBASIC2.51□□□□□ -2.01
SHFQ7M4L6 AC097463.2-201ENST00000421074 142 ntBASIC2.51□□□□□ -2.01
SHFQ7M4L6 AL358453.1-201ENST00000422522 250 ntBASIC2.51□□□□□ -2.01
SHFQ7M4L6 AIMP1P2-201ENST00000425294 312 ntBASIC2.51□□□□□ -2.01
SHFQ7M4L6 AC005534.2-201ENST00000431047 433 ntBASIC2.51□□□□□ -2.01
SHFQ7M4L6 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC2.51□□□□□ -2.01
SHFQ7M4L6 GPM6BP3-201ENST00000442797 145 ntBASIC2.51□□□□□ -2.01
SHFQ7M4L6 AL137792.2-201ENST00000443484 235 ntBASIC2.51□□□□□ -2.01
SHFQ7M4L6 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.51□□□□□ -2.01
SHFQ7M4L6 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC2.51□□□□□ -2.01
SHFQ7M4L6 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.51□□□□□ -2.01
SHFQ7M4L6 FTH1P2-201ENST00000466086 412 ntBASIC2.51□□□□□ -2.01
SHFQ7M4L6 AF186996.7-201ENST00000492781 209 ntBASIC2.51□□□□□ -2.01
SHFQ7M4L6 SNORA31.15-201ENST00000516771 132 ntBASIC2.51□□□□□ -2.01
SHFQ7M4L6 SNORA31.16-201ENST00000516773 139 ntBASIC2.51□□□□□ -2.01
SHFQ7M4L6 RNU6-699P-201ENST00000517081 110 ntBASIC2.51□□□□□ -2.01
SHFQ7M4L6 AC007375.1-201ENST00000554513 578 ntBASIC2.51□□□□□ -2.01
SHFQ7M4L6 SUB1P3-201ENST00000564581 315 ntBASIC2.51□□□□□ -2.01
SHFQ7M4L6 MIR5571-201ENST00000577998 113 ntBASIC2.51□□□□□ -2.01
SHFQ7M4L6 AC010620.2-201ENST00000600135 313 ntBASIC2.51□□□□□ -2.01
SHFQ7M4L6 AC073410.2-201ENST00000603240 332 ntBASIC2.51□□□□□ -2.01
SHFQ7M4L6 AL078605.1-201ENST00000603529 500 ntBASIC2.51□□□□□ -2.01
SHFQ7M4L6 SNRPGP17-201ENST00000603780 214 ntBASIC2.51□□□□□ -2.01
SHFQ7M4L6 AL353621.2-201ENST00000605340 133 ntBASIC2.51□□□□□ -2.01
SHFQ7M4L6 AL162274.2-201ENST00000614406 332 ntBASIC2.51□□□□□ -2.01
SHFQ7M4L6 SMAD5-AS1_4.1-201ENST00000615561 167 ntBASIC2.51□□□□□ -2.01
SHFQ7M4L6 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC2.51□□□□□ -2.01
SHFQ7M4L6 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.51□□□□□ -2.01
SHFQ7M4L6 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.51□□□□□ -2.01
SHFQ7M4L6 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC2.51□□□□□ -2.01
SHFQ7M4L6 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.5□□□□□ -2.01
SHFQ7M4L6 AC092268.1-201ENST00000342691 405 ntBASIC2.5□□□□□ -2.01
SHFQ7M4L6 Y_RNA.31-201ENST00000362574 102 ntBASIC2.5□□□□□ -2.01
SHFQ7M4L6 RNU6-490P-201ENST00000362985 107 ntBASIC2.5□□□□□ -2.01
SHFQ7M4L6 RNU5B-2P-201ENST00000363036 113 ntBASIC2.5□□□□□ -2.01
SHFQ7M4L6 Y_RNA.112-201ENST00000363250 102 ntBASIC2.5□□□□□ -2.01
SHFQ7M4L6 Y_RNA.496-201ENST00000384444 101 ntBASIC2.5□□□□□ -2.01
SHFQ7M4L6 RNU1-57P-201ENST00000384491 166 ntBASIC2.5□□□□□ -2.01
SHFQ7M4L6 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
SHFQ7M4L6 RNU6-308P-201ENST00000390957 107 ntBASIC2.5□□□□□ -2.01
SHFQ7M4L6 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.5□□□□□ -2.01
SHFQ7M4L6 MRPS18CP6-201ENST00000423587 223 ntBASIC2.5□□□□□ -2.01
SHFQ7M4L6 AC018865.2-201ENST00000423631 129 ntBASIC2.5□□□□□ -2.01
SHFQ7M4L6 AC008267.5-201ENST00000424928 265 ntBASIC2.5□□□□□ -2.01
SHFQ7M4L6 Z82188.1-201ENST00000436709 154 ntBASIC2.5□□□□□ -2.01
SHFQ7M4L6 LINC01564-201ENST00000448327 566 ntTSL 3 BASIC2.5□□□□□ -2.01
SHFQ7M4L6 Y_RNA.631-201ENST00000459607 101 ntBASIC2.5□□□□□ -2.01
SHFQ7M4L6 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC2.5□□□□□ -2.01
SHFQ7M4L6 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC2.5□□□□□ -2.01
SHFQ7M4L6 RPL23AP75-201ENST00000491601 451 ntBASIC2.5□□□□□ -2.01
SHFQ7M4L6 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.5□□□□□ -2.01
SHFQ7M4L6 AIG1P1-201ENST00000503376 148 ntBASIC2.5□□□□□ -2.01
SHFQ7M4L6 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.5□□□□□ -2.01
SHFQ7M4L6 RNU5F-2P-201ENST00000516066 82 ntBASIC2.5□□□□□ -2.01
SHFQ7M4L6 RNU6-976P-201ENST00000516086 111 ntBASIC2.5□□□□□ -2.01
SHFQ7M4L6 RNU6-264P-201ENST00000517134 104 ntBASIC2.5□□□□□ -2.01
SHFQ7M4L6 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.5□□□□□ -2.01
SHFQ7M4L6 AC115990.1-201ENST00000526957 301 ntBASIC2.5□□□□□ -2.01
SHFQ7M4L6 AC084816.1-207ENST00000538317 584 ntTSL 4 BASIC2.5□□□□□ -2.01
SHFQ7M4L6 AC016256.1-201ENST00000547971 354 ntBASIC2.5□□□□□ -2.01
SHFQ7M4L6 SNRPGP18-201ENST00000553000 214 ntBASIC2.5□□□□□ -2.01
SHFQ7M4L6 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
SHFQ7M4L6 AC010928.2-201ENST00000588017 287 ntBASIC2.5□□□□□ -2.01
SHFQ7M4L6 ZNF861P-201ENST00000588126 639 ntBASIC2.5□□□□□ -2.01
SHFQ7M4L6 YPEL5P2-201ENST00000605553 359 ntBASIC2.5□□□□□ -2.01
SHFQ7M4L6 AC099654.10-201ENST00000640395 161 ntBASIC2.5□□□□□ -2.01
SHFQ7M4L6 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.5□□□□□ -2.01
SHFQ7M4L6 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
SHFQ7M4L6 Y_RNA.216-201ENST00000364205 93 ntBASIC2.49□□□□□ -2.01
SHFQ7M4L6 RNU6-99P-201ENST00000364721 107 ntBASIC2.49□□□□□ -2.01
SHFQ7M4L6 RNU6-142P-201ENST00000384019 107 ntBASIC2.49□□□□□ -2.01
SHFQ7M4L6 AL138885.1-201ENST00000405921 675 ntBASIC2.49□□□□□ -2.01
SHFQ7M4L6 RNA5SP494-201ENST00000410653 129 ntBASIC2.49□□□□□ -2.01
SHFQ7M4L6 AL590135.1-201ENST00000422215 156 ntBASIC2.49□□□□□ -2.01
SHFQ7M4L6 PMCHL1-202ENST00000423102 261 ntBASIC2.49□□□□□ -2.01
SHFQ7M4L6 AC019205.3-201ENST00000424573 156 ntBASIC2.49□□□□□ -2.01
SHFQ7M4L6 EIF4EP4-201ENST00000424916 578 ntBASIC2.49□□□□□ -2.01
SHFQ7M4L6 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.49□□□□□ -2.01
SHFQ7M4L6 MTCO3P29-201ENST00000432119 779 ntBASIC2.49□□□□□ -2.01
SHFQ7M4L6 AC016700.2-201ENST00000446011 156 ntBASIC2.49□□□□□ -2.01
SHFQ7M4L6 AL353705.4-201ENST00000449661 238 ntBASIC2.49□□□□□ -2.01
SHFQ7M4L6 AL121594.1-201ENST00000475906 575 ntBASIC2.49□□□□□ -2.01
SHFQ7M4L6 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.49□□□□□ -2.01
SHFQ7M4L6 AC096576.1-201ENST00000489014 359 ntBASIC2.49□□□□□ -2.01
SHFQ7M4L6 RPL22P13-201ENST00000493291 347 ntBASIC2.49□□□□□ -2.01
SHFQ7M4L6 AC015911.1-201ENST00000495111 156 ntBASIC2.49□□□□□ -2.01
SHFQ7M4L6 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.49□□□□□ -2.01
SHFQ7M4L6 AC096721.1-201ENST00000513540 552 ntTSL 4 BASIC2.49□□□□□ -2.01
SHFQ7M4L6 RNA5SP112-201ENST00000515937 99 ntBASIC2.49□□□□□ -2.01
SHFQ7M4L6 SCARNA13-201ENST00000516672 275 ntBASIC2.49□□□□□ -2.01
SHFQ7M4L6 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.49□□□□□ -2.01
SHFQ7M4L6 AL590705.4-201ENST00000532209 134 ntBASIC2.49□□□□□ -2.01
SHFQ7M4L6 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.49□□□□□ -2.01
SHFQ7M4L6 AC021231.3-201ENST00000558497 370 ntBASIC2.49□□□□□ -2.01
SHFQ7M4L6 MIR3171-201ENST00000584270 74 ntBASIC2.49□□□□□ -2.01
SHFQ7M4L6 AL356575.1-201ENST00000603008 283 ntBASIC2.49□□□□□ -2.01
SHFQ7M4L6 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.49□□□□□ -2.01
SHFQ7M4L6 AC091925.1-201ENST00000623204 462 ntBASIC2.49□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms