Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 AK6P2-201ENST00000549020 471 ntBASIC-0.7□□□□□ -2.52
VPS13CQ709C8 AP002826.1-201ENST00000608835 315 ntBASIC-0.7□□□□□ -2.52
VPS13CQ709C8 Y_RNA.121-201ENST00000363309 113 ntBASIC-0.7□□□□□ -2.52
VPS13CQ709C8 Y_RNA.311-201ENST00000365068 96 ntBASIC-0.7□□□□□ -2.52
VPS13CQ709C8 RNU6-611P-201ENST00000384276 104 ntBASIC-0.7□□□□□ -2.52
VPS13CQ709C8 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC-0.7□□□□□ -2.52
VPS13CQ709C8 ELOCP11-201ENST00000436690 332 ntBASIC-0.7□□□□□ -2.52
VPS13CQ709C8 AC002429.1-201ENST00000437672 148 ntBASIC-0.7□□□□□ -2.52
VPS13CQ709C8 ELOCP16-201ENST00000444494 332 ntBASIC-0.7□□□□□ -2.52
VPS13CQ709C8 RNU6-339P-201ENST00000384310 107 ntBASIC-0.7□□□□□ -2.52
VPS13CQ709C8 RAB28P5-201ENST00000427490 651 ntBASIC-0.7□□□□□ -2.52
VPS13CQ709C8 AL355816.2-201ENST00000610049 647 ntBASIC-0.7□□□□□ -2.52
VPS13CQ709C8 AC015726.2-201ENST00000620112 122 ntBASIC-0.7□□□□□ -2.52
VPS13CQ709C8 RNU6-480P-201ENST00000384332 107 ntBASIC-0.71□□□□□ -2.52
VPS13CQ709C8 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC-0.71□□□□□ -2.52
VPS13CQ709C8 MTCO3P12-201ENST00000416718 547 ntBASIC-0.71□□□□□ -2.52
VPS13CQ709C8 MTND1P28-201ENST00000435623 950 ntBASIC-0.71□□□□□ -2.52
VPS13CQ709C8 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC-0.71□□□□□ -2.52
VPS13CQ709C8 AC018554.1-201ENST00000565506 800 ntTSL 2 BASIC-0.71□□□□□ -2.52
VPS13CQ709C8 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC-0.71□□□□□ -2.52
VPS13CQ709C8 MIR18A-201ENST00000362310 71 ntBASIC-0.71□□□□□ -2.52
VPS13CQ709C8 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC-0.71□□□□□ -2.52
VPS13CQ709C8 AC104689.1-201ENST00000473356 768 ntBASIC-0.71□□□□□ -2.52
VPS13CQ709C8 AC104982.1-201ENST00000478775 574 ntBASIC-0.71□□□□□ -2.52
VPS13CQ709C8 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC-0.71□□□□□ -2.52
VPS13CQ709C8 SNORA70.16-201ENST00000516390 95 ntBASIC-0.71□□□□□ -2.52
VPS13CQ709C8 SNORD114-14-201ENST00000362723 75 ntBASIC-0.72□□□□□ -2.52
VPS13CQ709C8 Y_RNA.326-201ENST00000365176 113 ntBASIC-0.72□□□□□ -2.52
VPS13CQ709C8 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC-0.72□□□□□ -2.52
VPS13CQ709C8 AL589678.1-201ENST00000452685 561 ntTSL 3 BASIC-0.72□□□□□ -2.52
VPS13CQ709C8 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC-0.72□□□□□ -2.52
VPS13CQ709C8 AC109329.1-201ENST00000518744 317 ntBASIC-0.72□□□□□ -2.52
VPS13CQ709C8 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC-0.72□□□□□ -2.52
VPS13CQ709C8 RNA5SP391-201ENST00000363456 119 ntBASIC-0.72□□□□□ -2.52
VPS13CQ709C8 RAC1P6-201ENST00000423911 575 ntBASIC-0.72□□□□□ -2.52
VPS13CQ709C8 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC-0.72□□□□□ -2.52
VPS13CQ709C8 AL132657.2-201ENST00000564417 358 ntBASIC-0.72□□□□□ -2.52
VPS13CQ709C8 SUMO2P14-201ENST00000604488 293 ntBASIC-0.72□□□□□ -2.52
VPS13CQ709C8 AC005021.1-201ENST00000608730 355 ntBASIC-0.72□□□□□ -2.52
VPS13CQ709C8 AP005229.2-201ENST00000609980 697 ntBASIC-0.72□□□□□ -2.52
VPS13CQ709C8 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC-0.72□□□□□ -2.52
VPS13CQ709C8 uc_338.16-201ENST00000621804 95 ntBASIC-0.72□□□□□ -2.52
VPS13CQ709C8 AC107982.1-201ENST00000507171 1300 ntBASIC-0.72□□□□□ -2.52
VPS13CQ709C8 SNORD114-11-201ENST00000363738 75 ntBASIC-0.72□□□□□ -2.53
VPS13CQ709C8 MTND5P2-201ENST00000442927 1142 ntBASIC-0.72□□□□□ -2.53
VPS13CQ709C8 AC124293.1-201ENST00000530034 493 ntBASIC-0.72□□□□□ -2.53
VPS13CQ709C8 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC-0.72□□□□□ -2.53
VPS13CQ709C8 GHRLOS.1-201ENST00000610995 70 ntBASIC-0.72□□□□□ -2.53
VPS13CQ709C8 AL136317.1-201ENST00000612653 226 ntBASIC-0.72□□□□□ -2.53
VPS13CQ709C8 AC130324.3-201ENST00000614165 542 ntBASIC-0.72□□□□□ -2.53
VPS13CQ709C8 RNU6-116P-201ENST00000384042 109 ntBASIC-0.73□□□□□ -2.53
VPS13CQ709C8 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC-0.73□□□□□ -2.53
VPS13CQ709C8 SNORA70.12-201ENST00000516084 153 ntBASIC-0.73□□□□□ -2.53
VPS13CQ709C8 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC-0.73□□□□□ -2.53
VPS13CQ709C8 ZNF736P9Y-201ENST00000439586 1345 ntBASIC-0.73□□□□□ -2.53
VPS13CQ709C8 RNU6-317P-201ENST00000384031 107 ntBASIC-0.73□□□□□ -2.53
VPS13CQ709C8 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.73□□□□□ -2.53
VPS13CQ709C8 BTF3P8-201ENST00000414577 526 ntBASIC-0.73□□□□□ -2.53
VPS13CQ709C8 PTGES3P1-201ENST00000439531 483 ntBASIC-0.73□□□□□ -2.53
VPS13CQ709C8 AL096829.2-201ENST00000446582 742 ntBASIC-0.73□□□□□ -2.53
VPS13CQ709C8 snoU13.7-201ENST00000459220 104 ntBASIC-0.73□□□□□ -2.53
VPS13CQ709C8 AC011005.2-201ENST00000487324 359 ntBASIC-0.73□□□□□ -2.53
VPS13CQ709C8 AC117525.1-201ENST00000515228 503 ntBASIC-0.73□□□□□ -2.53
VPS13CQ709C8 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-0.73□□□□□ -2.53
VPS13CQ709C8 Y_RNA.190-201ENST00000363964 101 ntBASIC-0.74□□□□□ -2.53
VPS13CQ709C8 RNU2-59P-201ENST00000410482 191 ntBASIC-0.74□□□□□ -2.53
VPS13CQ709C8 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC-0.74□□□□□ -2.53
VPS13CQ709C8 MEMO1P3-201ENST00000459811 302 ntBASIC-0.74□□□□□ -2.53
VPS13CQ709C8 HMGB1P33-201ENST00000563485 527 ntBASIC-0.74□□□□□ -2.53
VPS13CQ709C8 AC009032.1-201ENST00000617574 431 ntBASIC-0.74□□□□□ -2.53
VPS13CQ709C8 UBE2V1P15-201ENST00000407776 448 ntBASIC-0.74□□□□□ -2.53
VPS13CQ709C8 MIR548H2-201ENST00000408874 88 ntBASIC-0.74□□□□□ -2.53
VPS13CQ709C8 MTND4LP21-201ENST00000415303 295 ntBASIC-0.74□□□□□ -2.53
VPS13CQ709C8 AC006210.1-201ENST00000424882 111 ntBASIC-0.74□□□□□ -2.53
VPS13CQ709C8 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC-0.74□□□□□ -2.53
VPS13CQ709C8 RNU7-27P-201ENST00000459281 62 ntBASIC-0.74□□□□□ -2.53
VPS13CQ709C8 MTCO2P15-201ENST00000532655 656 ntBASIC-0.74□□□□□ -2.53
VPS13CQ709C8 ELOCP32-201ENST00000548625 324 ntBASIC-0.74□□□□□ -2.53
VPS13CQ709C8 AL031281.1-201ENST00000604049 488 ntBASIC-0.74□□□□□ -2.53
VPS13CQ709C8 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC-0.74□□□□□ -2.53
VPS13CQ709C8 SNORD115-2-201ENST00000362842 82 ntBASIC-0.74□□□□□ -2.53
VPS13CQ709C8 RNY4P28-201ENST00000365281 93 ntBASIC-0.74□□□□□ -2.53
VPS13CQ709C8 AC002381.1-201ENST00000447049 280 ntBASIC-0.74□□□□□ -2.53
VPS13CQ709C8 uc_338.28-201ENST00000612082 187 ntBASIC-0.74□□□□□ -2.53
VPS13CQ709C8 EIF4E2P1-201ENST00000393781 255 ntBASIC-0.75□□□□□ -2.53
VPS13CQ709C8 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC-0.75□□□□□ -2.53
VPS13CQ709C8 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC-0.75□□□□□ -2.53
VPS13CQ709C8 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC-0.75□□□□□ -2.53
VPS13CQ709C8 AC092573.2-201ENST00000434546 243 ntBASIC-0.75□□□□□ -2.53
VPS13CQ709C8 UBE2Q2P9-201ENST00000490086 202 ntBASIC-0.75□□□□□ -2.53
VPS13CQ709C8 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC-0.75□□□□□ -2.53
VPS13CQ709C8 AL391001.1-201ENST00000602747 715 ntBASIC-0.75□□□□□ -2.53
VPS13CQ709C8 MIR103A2-201ENST00000362154 78 ntBASIC-0.75□□□□□ -2.53
VPS13CQ709C8 Y_RNA.543-201ENST00000384649 107 ntBASIC-0.75□□□□□ -2.53
VPS13CQ709C8 AL139098.1-201ENST00000407291 389 ntBASIC-0.75□□□□□ -2.53
VPS13CQ709C8 AC106038.2-201ENST00000520706 568 ntBASIC-0.75□□□□□ -2.53
VPS13CQ709C8 AP000403.1-201ENST00000603349 851 ntBASIC-0.75□□□□□ -2.53
VPS13CQ709C8 AL670379.3-201ENST00000605040 251 ntBASIC-0.75□□□□□ -2.53
VPS13CQ709C8 PLD1-217ENST00000627725 174 ntTSL 5 BASIC-0.75□□□□□ -2.53
VPS13CQ709C8 SNORA40.8-201ENST00000411034 126 ntBASIC-0.75□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms