Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 MIR449A-201ENST00000362113 91 ntBASIC2.56□□□□□ -2
ALFQ53S48 Y_RNA.6-201ENST00000362350 114 ntBASIC2.56□□□□□ -2
ALFQ53S48 RNU6-1159P-201ENST00000362933 107 ntBASIC2.56□□□□□ -2
ALFQ53S48 Y_RNA.89-201ENST00000363031 102 ntBASIC2.56□□□□□ -2
ALFQ53S48 RNU6-1252P-201ENST00000363054 104 ntBASIC2.56□□□□□ -2
ALFQ53S48 SNORA16B-201ENST00000364674 135 ntBASIC2.56□□□□□ -2
ALFQ53S48 MIR208B-201ENST00000401172 77 ntBASIC2.56□□□□□ -2
ALFQ53S48 RN7SKP284-201ENST00000411002 343 ntBASIC2.56□□□□□ -2
ALFQ53S48 AC012306.1-201ENST00000423267 114 ntBASIC2.56□□□□□ -2
ALFQ53S48 RPS29P27-201ENST00000463711 170 ntBASIC2.56□□□□□ -2
ALFQ53S48 AC021146.2-201ENST00000504736 556 ntBASIC2.56□□□□□ -2
ALFQ53S48 KRTAP13-6P-201ENST00000508999 371 ntBASIC2.56□□□□□ -2
ALFQ53S48 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.56□□□□□ -2
ALFQ53S48 AC093259.1-201ENST00000509755 300 ntBASIC2.56□□□□□ -2
ALFQ53S48 AC096745.1-201ENST00000509945 370 ntBASIC2.56□□□□□ -2
ALFQ53S48 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC2.56□□□□□ -2
ALFQ53S48 MIR449C-201ENST00000516047 92 ntBASIC2.56□□□□□ -2
ALFQ53S48 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.56□□□□□ -2
ALFQ53S48 PSMA4-204ENST00000558094 651 ntTSL 3 BASIC2.56□□□□□ -2
ALFQ53S48 MIR5694-201ENST00000581190 76 ntBASIC2.56□□□□□ -2
ALFQ53S48 AL356575.1-201ENST00000603008 283 ntBASIC2.56□□□□□ -2
ALFQ53S48 CTHRC1P1-201ENST00000605383 469 ntBASIC2.56□□□□□ -2
ALFQ53S48 RMST_3.1-201ENST00000611651 109 ntBASIC2.56□□□□□ -2
ALFQ53S48 PCGEM1.1-201ENST00000613431 131 ntBASIC2.56□□□□□ -2
ALFQ53S48 U4.3-201ENST00000621047 82 ntBASIC2.56□□□□□ -2
ALFQ53S48 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.55□□□□□ -2
ALFQ53S48 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
ALFQ53S48 Y_RNA.453-201ENST00000384223 109 ntBASIC2.55□□□□□ -2
ALFQ53S48 MIR144-201ENST00000384886 86 ntBASIC2.55□□□□□ -2
ALFQ53S48 MIR521-1-201ENST00000384902 87 ntBASIC2.55□□□□□ -2
ALFQ53S48 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.55□□□□□ -2
ALFQ53S48 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
ALFQ53S48 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.55□□□□□ -2
ALFQ53S48 VN1R36P-201ENST00000414936 291 ntBASIC2.55□□□□□ -2
ALFQ53S48 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.55□□□□□ -2
ALFQ53S48 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC2.55□□□□□ -2
ALFQ53S48 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.55□□□□□ -2
ALFQ53S48 C8orf59P1-201ENST00000429930 303 ntBASIC2.55□□□□□ -2
ALFQ53S48 IPO7P1-201ENST00000442031 636 ntBASIC2.55□□□□□ -2
ALFQ53S48 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
ALFQ53S48 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.55□□□□□ -2
ALFQ53S48 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.55□□□□□ -2
ALFQ53S48 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.55□□□□□ -2
ALFQ53S48 EIF4A1P12-201ENST00000551910 141 ntBASIC2.55□□□□□ -2
ALFQ53S48 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.55□□□□□ -2
ALFQ53S48 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.55□□□□□ -2
ALFQ53S48 MIR5092-201ENST00000583139 88 ntBASIC2.55□□□□□ -2
ALFQ53S48 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.55□□□□□ -2
ALFQ53S48 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.55□□□□□ -2
ALFQ53S48 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.55□□□□□ -2
ALFQ53S48 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.55□□□□□ -2
ALFQ53S48 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.55□□□□□ -2
ALFQ53S48 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
ALFQ53S48 Y_RNA.99-201ENST00000363138 105 ntBASIC2.54□□□□□ -2
ALFQ53S48 RNA5SP456-201ENST00000364002 114 ntBASIC2.54□□□□□ -2
ALFQ53S48 Y_RNA.295-201ENST00000364918 102 ntBASIC2.54□□□□□ -2
ALFQ53S48 RNU6-234P-201ENST00000365229 104 ntBASIC2.54□□□□□ -2
ALFQ53S48 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
ALFQ53S48 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC2.54□□□□□ -2
ALFQ53S48 AC009161.1-201ENST00000417306 376 ntBASIC2.54□□□□□ -2
ALFQ53S48 ZNF885P-201ENST00000420174 1098 ntBASIC2.54□□□□□ -2
ALFQ53S48 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC2.54□□□□□ -2
ALFQ53S48 FAM206BP-201ENST00000510179 541 ntBASIC2.54□□□□□ -2
ALFQ53S48 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.54□□□□□ -2
ALFQ53S48 RNA5SP490-201ENST00000517141 136 ntBASIC2.54□□□□□ -2
ALFQ53S48 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC2.54□□□□□ -2
ALFQ53S48 AC146944.4-201ENST00000602697 718 ntBASIC2.54□□□□□ -2
ALFQ53S48 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC2.54□□□□□ -2
ALFQ53S48 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.53□□□□□ -2
ALFQ53S48 Y_RNA.123-201ENST00000363338 102 ntBASIC2.53□□□□□ -2
ALFQ53S48 XGY1-201ENST00000381172 446 ntBASIC2.53□□□□□ -2
ALFQ53S48 RNU6-378P-201ENST00000384324 107 ntBASIC2.53□□□□□ -2
ALFQ53S48 SNORA67.4-201ENST00000384688 142 ntBASIC2.53□□□□□ -2
ALFQ53S48 SNORD115-47-201ENST00000391226 86 ntBASIC2.53□□□□□ -2
ALFQ53S48 RNA5SP118-201ENST00000410385 109 ntBASIC2.53□□□□□ -2
ALFQ53S48 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC2.53□□□□□ -2
ALFQ53S48 AL645568.3-201ENST00000433683 316 ntBASIC2.53□□□□□ -2
ALFQ53S48 AC133865.1-201ENST00000438619 339 ntTSL 3 BASIC2.53□□□□□ -2
ALFQ53S48 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC2.53□□□□□ -2
ALFQ53S48 AL513328.1-201ENST00000446460 224 ntBASIC2.53□□□□□ -2
ALFQ53S48 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC2.53□□□□□ -2
ALFQ53S48 AC008154.1-201ENST00000453087 327 ntTSL 3 BASIC2.53□□□□□ -2
ALFQ53S48 IGHVII-53-1-201ENST00000519538 255 ntBASIC2.53□□□□□ -2
ALFQ53S48 MIR4287-201ENST00000579398 78 ntBASIC2.53□□□□□ -2
ALFQ53S48 MIR8076-201ENST00000611401 83 ntBASIC2.53□□□□□ -2
ALFQ53S48 AC090517.2-201ENST00000614966 680 ntBASIC2.53□□□□□ -2
ALFQ53S48 AL359314.1-201ENST00000616913 261 ntBASIC2.53□□□□□ -2
ALFQ53S48 AC130466.1-201ENST00000636354 4683 ntTSL 5 BASIC2.53□□□□□ -2.01
ALFQ53S48 AL596028.1-201ENST00000326971 197 ntBASIC2.52□□□□□ -2.01
ALFQ53S48 RNU4-82P-201ENST00000362443 140 ntBASIC2.52□□□□□ -2.01
ALFQ53S48 RNU6-534P-201ENST00000364877 106 ntBASIC2.52□□□□□ -2.01
ALFQ53S48 Y_RNA.414-201ENST00000384011 101 ntBASIC2.52□□□□□ -2.01
ALFQ53S48 RNA5SP465-201ENST00000391195 109 ntBASIC2.52□□□□□ -2.01
ALFQ53S48 AL359511.1-201ENST00000402970 211 ntBASIC2.52□□□□□ -2.01
ALFQ53S48 RNA5SP450-201ENST00000411206 102 ntBASIC2.52□□□□□ -2.01
ALFQ53S48 CR769767.1-201ENST00000436337 346 ntBASIC2.52□□□□□ -2.01
ALFQ53S48 AC005741.1-201ENST00000511094 432 ntBASIC2.52□□□□□ -2.01
ALFQ53S48 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.52□□□□□ -2.01
ALFQ53S48 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.52□□□□□ -2.01
ALFQ53S48 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 216 ms