Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 RNU4-75P-201ENST00000364621 146 ntBASIC1.59□□□□□ -2.15
RFX4Q33E94 SNORD73A-201ENST00000386062 65 ntBASIC1.59□□□□□ -2.15
RFX4Q33E94 RNA5SP219-201ENST00000390940 113 ntBASIC1.59□□□□□ -2.15
RFX4Q33E94 CALM2P3-201ENST00000400429 449 ntBASIC1.59□□□□□ -2.15
RFX4Q33E94 AL606923.1-201ENST00000406616 190 ntBASIC1.59□□□□□ -2.15
RFX4Q33E94 MIR1262-201ENST00000408276 93 ntBASIC1.59□□□□□ -2.15
RFX4Q33E94 Y_RNA.597-201ENST00000410463 100 ntBASIC1.59□□□□□ -2.15
RFX4Q33E94 VN1R108P-201ENST00000431580 830 ntBASIC1.59□□□□□ -2.15
RFX4Q33E94 SNAP23P1-201ENST00000433229 246 ntBASIC1.59□□□□□ -2.15
RFX4Q33E94 AL121601.2-201ENST00000438019 707 ntBASIC1.59□□□□□ -2.15
RFX4Q33E94 RPL7P54-201ENST00000438336 674 ntBASIC1.59□□□□□ -2.15
RFX4Q33E94 MTATP6P26-201ENST00000445926 662 ntBASIC1.59□□□□□ -2.15
RFX4Q33E94 AC083798.1-201ENST00000472671 131 ntBASIC1.59□□□□□ -2.15
RFX4Q33E94 RPS29P11-201ENST00000496507 171 ntBASIC1.59□□□□□ -2.15
RFX4Q33E94 AC091874.1-201ENST00000511402 339 ntBASIC1.59□□□□□ -2.15
RFX4Q33E94 RNU6-835P-201ENST00000516974 104 ntBASIC1.59□□□□□ -2.15
RFX4Q33E94 MTND4P7-201ENST00000523876 130 ntBASIC1.59□□□□□ -2.15
RFX4Q33E94 AP001893.2-201ENST00000526949 202 ntBASIC1.59□□□□□ -2.15
RFX4Q33E94 AP003034.1-201ENST00000534621 422 ntBASIC1.59□□□□□ -2.15
RFX4Q33E94 AC018630.3-201ENST00000542637 96 ntBASIC1.59□□□□□ -2.15
RFX4Q33E94 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC1.59□□□□□ -2.15
RFX4Q33E94 VN1R80P-201ENST00000597126 338 ntBASIC1.59□□□□□ -2.15
RFX4Q33E94 AL670379.2-201ENST00000604983 252 ntBASIC1.59□□□□□ -2.15
RFX4Q33E94 RNU6-85P-201ENST00000605989 107 ntBASIC1.59□□□□□ -2.15
RFX4Q33E94 AC103591.3-201ENST00000608684 209 ntBASIC1.59□□□□□ -2.15
RFX4Q33E94 AC048344.4-201ENST00000619744 527 ntBASIC1.59□□□□□ -2.15
RFX4Q33E94 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
RFX4Q33E94 RNU4-15P-201ENST00000362613 141 ntBASIC1.58□□□□□ -2.16
RFX4Q33E94 SNORA69-201ENST00000383895 132 ntBASIC1.58□□□□□ -2.16
RFX4Q33E94 RNU6-546P-201ENST00000383991 107 ntBASIC1.58□□□□□ -2.16
RFX4Q33E94 RNU6-38P-201ENST00000384085 107 ntBASIC1.58□□□□□ -2.16
RFX4Q33E94 MIR518A2-201ENST00000384966 87 ntBASIC1.58□□□□□ -2.16
RFX4Q33E94 RNU6-780P-201ENST00000391030 104 ntBASIC1.58□□□□□ -2.16
RFX4Q33E94 MIR1294-201ENST00000408503 142 ntBASIC1.58□□□□□ -2.16
RFX4Q33E94 RNU4-26P-201ENST00000410270 107 ntBASIC1.58□□□□□ -2.16
RFX4Q33E94 RNU2-16P-201ENST00000410712 136 ntBASIC1.58□□□□□ -2.16
RFX4Q33E94 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.58□□□□□ -2.16
RFX4Q33E94 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC1.58□□□□□ -2.16
RFX4Q33E94 AC003989.2-201ENST00000440224 169 ntBASIC1.58□□□□□ -2.16
RFX4Q33E94 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.58□□□□□ -2.16
RFX4Q33E94 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.58□□□□□ -2.16
RFX4Q33E94 RNU6-333P-201ENST00000459117 107 ntBASIC1.58□□□□□ -2.16
RFX4Q33E94 MTCO3P38-201ENST00000468910 766 ntBASIC1.58□□□□□ -2.16
RFX4Q33E94 SNRPGP7-201ENST00000469016 106 ntBASIC1.58□□□□□ -2.16
RFX4Q33E94 AC096711.2-201ENST00000510592 454 ntTSL 5 BASIC1.58□□□□□ -2.16
RFX4Q33E94 SNORA31.16-201ENST00000516773 139 ntBASIC1.58□□□□□ -2.16
RFX4Q33E94 AC022616.8-201ENST00000533569 253 ntBASIC1.58□□□□□ -2.16
RFX4Q33E94 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
RFX4Q33E94 CBX3P4-201ENST00000538909 354 ntBASIC1.58□□□□□ -2.16
RFX4Q33E94 AC110588.1-201ENST00000559699 137 ntBASIC1.58□□□□□ -2.16
RFX4Q33E94 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.58□□□□□ -2.16
RFX4Q33E94 AL158209.2-201ENST00000619266 216 ntBASIC1.58□□□□□ -2.16
RFX4Q33E94 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC1.58□□□□□ -2.16
RFX4Q33E94 MIR1248-201ENST00000629190 106 ntBASIC1.58□□□□□ -2.16
RFX4Q33E94 OR5AK4P-201ENST00000635912 903 ntBASIC1.58□□□□□ -2.16
RFX4Q33E94 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC1.58□□□□□ -2.16
RFX4Q33E94 Y_RNA.167-201ENST00000363735 109 ntBASIC1.57□□□□□ -2.16
RFX4Q33E94 Y_RNA.378-201ENST00000365652 113 ntBASIC1.57□□□□□ -2.16
RFX4Q33E94 SNORA8-201ENST00000384574 139 ntBASIC1.57□□□□□ -2.16
RFX4Q33E94 MIR29B2-201ENST00000385055 81 ntBASIC1.57□□□□□ -2.16
RFX4Q33E94 MIR9-3-201ENST00000385084 90 ntBASIC1.57□□□□□ -2.16
RFX4Q33E94 SNORA12-201ENST00000391162 147 ntBASIC1.57□□□□□ -2.16
RFX4Q33E94 MTCO3P40-201ENST00000392516 676 ntBASIC1.57□□□□□ -2.16
RFX4Q33E94 RNU6-1245P-201ENST00000411130 106 ntBASIC1.57□□□□□ -2.16
RFX4Q33E94 AL645568.3-201ENST00000433683 316 ntBASIC1.57□□□□□ -2.16
RFX4Q33E94 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC1.57□□□□□ -2.16
RFX4Q33E94 AL137159.1-201ENST00000452808 512 ntBASIC1.57□□□□□ -2.16
RFX4Q33E94 PRELID3BP1-201ENST00000457142 540 ntBASIC1.57□□□□□ -2.16
RFX4Q33E94 TPTE2P5-203ENST00000458118 728 ntBASIC1.57□□□□□ -2.16
RFX4Q33E94 RNU6-261P-201ENST00000459506 102 ntBASIC1.57□□□□□ -2.16
RFX4Q33E94 AK3P2-201ENST00000507976 429 ntBASIC1.57□□□□□ -2.16
RFX4Q33E94 RPL39P5-202ENST00000512505 151 ntBASIC1.57□□□□□ -2.16
RFX4Q33E94 VN1R107P-201ENST00000601784 209 ntBASIC1.57□□□□□ -2.16
RFX4Q33E94 SNRPGP17-201ENST00000603780 214 ntBASIC1.57□□□□□ -2.16
RFX4Q33E94 AL034555.1-201ENST00000604816 211 ntBASIC1.57□□□□□ -2.16
RFX4Q33E94 AC080013.6-201ENST00000606185 215 ntBASIC1.57□□□□□ -2.16
RFX4Q33E94 AL359314.1-201ENST00000616913 261 ntBASIC1.57□□□□□ -2.16
RFX4Q33E94 AL359880.1-201ENST00000621879 266 ntBASIC1.57□□□□□ -2.16
RFX4Q33E94 AC124864.2-201ENST00000624736 186 ntBASIC1.57□□□□□ -2.16
RFX4Q33E94 SNORD98-201ENST00000636377 67 ntBASIC1.57□□□□□ -2.16
RFX4Q33E94 AL450472.1-202ENST00000637286 180 ntBASIC1.57□□□□□ -2.16
RFX4Q33E94 Y_RNA.41-201ENST00000362646 102 ntBASIC1.56□□□□□ -2.16
RFX4Q33E94 Y_RNA.194-201ENST00000363985 102 ntBASIC1.56□□□□□ -2.16
RFX4Q33E94 RNU6-1141P-201ENST00000364520 107 ntBASIC1.56□□□□□ -2.16
RFX4Q33E94 RNU6-611P-201ENST00000384276 104 ntBASIC1.56□□□□□ -2.16
RFX4Q33E94 Y_RNA.559-201ENST00000384686 107 ntBASIC1.56□□□□□ -2.16
RFX4Q33E94 SNORA40.19-201ENST00000390846 128 ntBASIC1.56□□□□□ -2.16
RFX4Q33E94 RNU6-648P-201ENST00000410190 107 ntBASIC1.56□□□□□ -2.16
RFX4Q33E94 KRTAP25-1-201ENST00000416044 370 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
RFX4Q33E94 AC016907.1-201ENST00000419483 435 ntBASIC1.56□□□□□ -2.16
RFX4Q33E94 RPL23AP95-201ENST00000426806 265 ntBASIC1.56□□□□□ -2.16
RFX4Q33E94 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.56□□□□□ -2.16
RFX4Q33E94 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC1.56□□□□□ -2.16
RFX4Q33E94 AL513124.1-201ENST00000450410 614 ntBASIC1.56□□□□□ -2.16
RFX4Q33E94 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC1.56□□□□□ -2.16
RFX4Q33E94 RN7SL429P-201ENST00000479090 223 ntBASIC1.56□□□□□ -2.16
RFX4Q33E94 RN7SL489P-201ENST00000486185 223 ntBASIC1.56□□□□□ -2.16
RFX4Q33E94 RN7SL327P-201ENST00000488659 223 ntBASIC1.56□□□□□ -2.16
RFX4Q33E94 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC1.56□□□□□ -2.16
RFX4Q33E94 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.56□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms