Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 U4.7-201ENST00000638126 106 ntBASIC3.12□□□□□ -1.91
TRIM71Q2Q1W2 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
TRIM71Q2Q1W2 SNORD56.1-201ENST00000362913 68 ntBASIC3.11□□□□□ -1.91
TRIM71Q2Q1W2 RNU6-428P-201ENST00000362942 107 ntBASIC3.11□□□□□ -1.91
TRIM71Q2Q1W2 RNU6-942P-201ENST00000363002 107 ntBASIC3.11□□□□□ -1.91
TRIM71Q2Q1W2 RNU6-1059P-201ENST00000363752 98 ntBASIC3.11□□□□□ -1.91
TRIM71Q2Q1W2 RNU6-842P-201ENST00000384269 107 ntBASIC3.11□□□□□ -1.91
TRIM71Q2Q1W2 Y_RNA.557-201ENST00000384680 107 ntBASIC3.11□□□□□ -1.91
TRIM71Q2Q1W2 MIR517A-201ENST00000385001 87 ntBASIC3.11□□□□□ -1.91
TRIM71Q2Q1W2 MIR9-1-201ENST00000385198 89 ntBASIC3.11□□□□□ -1.91
TRIM71Q2Q1W2 AL138827.1-201ENST00000402666 306 ntBASIC3.11□□□□□ -1.91
TRIM71Q2Q1W2 AL139095.1-201ENST00000404326 391 ntBASIC3.11□□□□□ -1.91
TRIM71Q2Q1W2 RNA5SP274-201ENST00000410484 108 ntBASIC3.11□□□□□ -1.91
TRIM71Q2Q1W2 AL358075.3-201ENST00000426289 226 ntBASIC3.11□□□□□ -1.91
TRIM71Q2Q1W2 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.11□□□□□ -1.91
TRIM71Q2Q1W2 AC009296.1-201ENST00000443146 155 ntBASIC3.11□□□□□ -1.91
TRIM71Q2Q1W2 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM71Q2Q1W2 MTATP8P1-201ENST00000467115 207 ntBASIC3.11□□□□□ -1.91
TRIM71Q2Q1W2 MED28P2-201ENST00000475771 317 ntBASIC3.11□□□□□ -1.91
TRIM71Q2Q1W2 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC3.11□□□□□ -1.91
TRIM71Q2Q1W2 AC015911.1-201ENST00000495111 156 ntBASIC3.11□□□□□ -1.91
TRIM71Q2Q1W2 AC108516.1-201ENST00000503666 257 ntTSL 2 BASIC3.11□□□□□ -1.91
TRIM71Q2Q1W2 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.11□□□□□ -1.91
TRIM71Q2Q1W2 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC3.11□□□□□ -1.91
TRIM71Q2Q1W2 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC3.11□□□□□ -1.91
TRIM71Q2Q1W2 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.11□□□□□ -1.91
TRIM71Q2Q1W2 AC008739.2-201ENST00000597006 317 ntBASIC3.11□□□□□ -1.91
TRIM71Q2Q1W2 7SK.7-201ENST00000603504 247 ntBASIC3.11□□□□□ -1.91
TRIM71Q2Q1W2 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.11□□□□□ -1.91
TRIM71Q2Q1W2 AC002064.3-201ENST00000623448 346 ntBASIC3.11□□□□□ -1.91
TRIM71Q2Q1W2 AC097372.5-201ENST00000623665 376 ntBASIC3.11□□□□□ -1.91
TRIM71Q2Q1W2 Y_RNA.149-201ENST00000363558 117 ntBASIC3.1□□□□□ -1.91
TRIM71Q2Q1W2 Y_RNA.151-201ENST00000363566 112 ntBASIC3.1□□□□□ -1.91
TRIM71Q2Q1W2 RNU6-596P-201ENST00000365395 98 ntBASIC3.1□□□□□ -1.91
TRIM71Q2Q1W2 Y_RNA.428-201ENST00000384078 102 ntBASIC3.1□□□□□ -1.91
TRIM71Q2Q1W2 Y_RNA.527-201ENST00000384573 102 ntBASIC3.1□□□□□ -1.91
TRIM71Q2Q1W2 Y_RNA.645-201ENST00000391229 102 ntBASIC3.1□□□□□ -1.91
TRIM71Q2Q1W2 AL133475.1-201ENST00000404414 305 ntBASIC3.1□□□□□ -1.91
TRIM71Q2Q1W2 RN7SKP58-201ENST00000411010 305 ntBASIC3.1□□□□□ -1.91
TRIM71Q2Q1W2 RNU6-1245P-201ENST00000411130 106 ntBASIC3.1□□□□□ -1.91
TRIM71Q2Q1W2 RPL19P1-201ENST00000411635 428 ntBASIC3.1□□□□□ -1.91
TRIM71Q2Q1W2 AL356277.2-201ENST00000421318 441 ntTSL 2 BASIC3.1□□□□□ -1.91
TRIM71Q2Q1W2 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC3.1□□□□□ -1.91
TRIM71Q2Q1W2 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.1□□□□□ -1.91
TRIM71Q2Q1W2 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.1□□□□□ -1.91
TRIM71Q2Q1W2 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC3.1□□□□□ -1.91
TRIM71Q2Q1W2 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.1□□□□□ -1.91
TRIM71Q2Q1W2 RNU6-1037P-201ENST00000459571 107 ntBASIC3.1□□□□□ -1.91
TRIM71Q2Q1W2 AC018437.1-201ENST00000492214 406 ntBASIC3.1□□□□□ -1.91
TRIM71Q2Q1W2 MRPS36P2-201ENST00000512569 299 ntBASIC3.1□□□□□ -1.91
TRIM71Q2Q1W2 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.1□□□□□ -1.91
TRIM71Q2Q1W2 RNU6-120P-201ENST00000516077 103 ntBASIC3.1□□□□□ -1.91
TRIM71Q2Q1W2 RNU6ATAC13P-201ENST00000516152 131 ntBASIC3.1□□□□□ -1.91
TRIM71Q2Q1W2 SNORD116.3-201ENST00000517176 78 ntBASIC3.1□□□□□ -1.91
TRIM71Q2Q1W2 GNAI2P1-201ENST00000541815 315 ntBASIC3.1□□□□□ -1.91
TRIM71Q2Q1W2 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC3.1□□□□□ -1.91
TRIM71Q2Q1W2 AC008269.2-201ENST00000561915 1105 ntBASIC3.1□□□□□ -1.91
TRIM71Q2Q1W2 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.1□□□□□ -1.91
TRIM71Q2Q1W2 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.1□□□□□ -1.91
TRIM71Q2Q1W2 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
TRIM71Q2Q1W2 VN1R107P-201ENST00000601784 209 ntBASIC3.1□□□□□ -1.91
TRIM71Q2Q1W2 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.1□□□□□ -1.91
TRIM71Q2Q1W2 MIR3529-201ENST00000637713 78 ntBASIC3.1□□□□□ -1.91
TRIM71Q2Q1W2 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
TRIM71Q2Q1W2 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC3.1□□□□□ -1.91
TRIM71Q2Q1W2 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.1□□□□□ -1.91
TRIM71Q2Q1W2 AC005592.1-201ENST00000566527 1640 ntBASIC3.09□□□□□ -1.91
TRIM71Q2Q1W2 Y_RNA.2-201ENST00000362330 96 ntBASIC3.09□□□□□ -1.91
TRIM71Q2Q1W2 Y_RNA.153-201ENST00000363615 91 ntBASIC3.09□□□□□ -1.91
TRIM71Q2Q1W2 Y_RNA.193-201ENST00000363979 102 ntBASIC3.09□□□□□ -1.91
TRIM71Q2Q1W2 Y_RNA.455-201ENST00000384230 98 ntBASIC3.09□□□□□ -1.91
TRIM71Q2Q1W2 HNRNPDLP1-201ENST00000412834 550 ntBASIC3.09□□□□□ -1.91
TRIM71Q2Q1W2 AC114482.1-201ENST00000418010 247 ntBASIC3.09□□□□□ -1.91
TRIM71Q2Q1W2 AL731563.1-201ENST00000442202 214 ntBASIC3.09□□□□□ -1.91
TRIM71Q2Q1W2 OSTCP8-201ENST00000445117 448 ntBASIC3.09□□□□□ -1.91
TRIM71Q2Q1W2 RPS3P1-201ENST00000456781 192 ntBASIC3.09□□□□□ -1.91
TRIM71Q2Q1W2 RN7SL633P-201ENST00000488974 297 ntBASIC3.09□□□□□ -1.91
TRIM71Q2Q1W2 CR383656.8-201ENST00000549046 145 ntBASIC3.09□□□□□ -1.91
TRIM71Q2Q1W2 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC3.09□□□□□ -1.91
TRIM71Q2Q1W2 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.09□□□□□ -1.91
TRIM71Q2Q1W2 AC104695.3-201ENST00000604052 296 ntBASIC3.09□□□□□ -1.91
TRIM71Q2Q1W2 MPP6-209ENST00000625307 126 ntTSL 5 BASIC3.09□□□□□ -1.91
TRIM71Q2Q1W2 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
TRIM71Q2Q1W2 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
TRIM71Q2Q1W2 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
TRIM71Q2Q1W2 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM71Q2Q1W2 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TRIM71Q2Q1W2 AC093831.2-201ENST00000624393 3427 ntBASIC3.08□□□□□ -1.92
TRIM71Q2Q1W2 AC093010.3-201ENST00000570269 15214 ntBASIC3.08□□□□□ -1.92
TRIM71Q2Q1W2 Y_RNA.47-201ENST00000362697 108 ntBASIC3.08□□□□□ -1.92
TRIM71Q2Q1W2 U3.6-201ENST00000363622 211 ntBASIC3.08□□□□□ -1.92
TRIM71Q2Q1W2 RNU6-933P-201ENST00000384424 107 ntBASIC3.08□□□□□ -1.92
TRIM71Q2Q1W2 RNA5SP21-201ENST00000410917 96 ntBASIC3.08□□□□□ -1.92
TRIM71Q2Q1W2 AC074117.2-201ENST00000417130 397 ntBASIC3.08□□□□□ -1.92
TRIM71Q2Q1W2 AC138623.1-201ENST00000418060 216 ntBASIC3.08□□□□□ -1.92
TRIM71Q2Q1W2 OOSP1P1-201ENST00000423265 274 ntBASIC3.08□□□□□ -1.92
TRIM71Q2Q1W2 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.08□□□□□ -1.92
TRIM71Q2Q1W2 AC096644.2-201ENST00000429278 159 ntBASIC3.08□□□□□ -1.92
TRIM71Q2Q1W2 AL133396.1-201ENST00000432048 687 ntBASIC3.08□□□□□ -1.92
TRIM71Q2Q1W2 AC108059.2-201ENST00000434626 151 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms