Protein–RNA interactions for Protein: Q16610

ECM1, Extracellular matrix protein 1, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1Q16610 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
ECM1Q16610 AL512633.1-201ENST00000399931 655 ntBASIC4.2□□□□□ -1.74
ECM1Q16610 AL136320.1-201ENST00000417273 430 ntTSL 3 BASIC4.2□□□□□ -1.74
ECM1Q16610 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC4.2□□□□□ -1.74
ECM1Q16610 AL133162.1-201ENST00000463228 453 ntBASIC4.2□□□□□ -1.74
ECM1Q16610 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.2□□□□□ -1.74
ECM1Q16610 RPL26P26-201ENST00000480251 434 ntBASIC4.2□□□□□ -1.74
ECM1Q16610 SNORA72.7-201ENST00000516349 94 ntBASIC4.2□□□□□ -1.74
ECM1Q16610 RNU6-919P-201ENST00000516731 104 ntBASIC4.2□□□□□ -1.74
ECM1Q16610 AC026241.1-201ENST00000517873 2142 ntBASIC4.2□□□□□ -1.74
ECM1Q16610 AC008011.1-201ENST00000545989 227 ntBASIC4.2□□□□□ -1.74
ECM1Q16610 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.2□□□□□ -1.74
ECM1Q16610 AL360157.1-201ENST00000565962 87 ntBASIC4.2□□□□□ -1.74
ECM1Q16610 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC4.2□□□□□ -1.74
ECM1Q16610 MIR4679-1-201ENST00000637619 75 ntBASIC4.2□□□□□ -1.74
ECM1Q16610 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC4.2□□□□□ -1.74
ECM1Q16610 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC4.2□□□□□ -1.74
ECM1Q16610 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
ECM1Q16610 AC008725.1-201ENST00000605123 2263 ntBASIC4.2□□□□□ -1.74
ECM1Q16610 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
ECM1Q16610 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
ECM1Q16610 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ECM1Q16610 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.19□□□□□ -1.74
ECM1Q16610 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
ECM1Q16610 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
ECM1Q16610 RNA5SP124-201ENST00000362739 110 ntBASIC4.19□□□□□ -1.74
ECM1Q16610 RNU6-529P-201ENST00000363383 104 ntBASIC4.19□□□□□ -1.74
ECM1Q16610 Y_RNA.233-201ENST00000364407 101 ntBASIC4.19□□□□□ -1.74
ECM1Q16610 Y_RNA.273-201ENST00000364703 102 ntBASIC4.19□□□□□ -1.74
ECM1Q16610 Y_RNA.331-201ENST00000365267 102 ntBASIC4.19□□□□□ -1.74
ECM1Q16610 MIR767-201ENST00000390228 109 ntBASIC4.19□□□□□ -1.74
ECM1Q16610 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
ECM1Q16610 RNU6-1248P-201ENST00000391096 64 ntBASIC4.19□□□□□ -1.74
ECM1Q16610 RNU6-918P-201ENST00000391219 106 ntBASIC4.19□□□□□ -1.74
ECM1Q16610 CBX3P9-201ENST00000402326 552 ntBASIC4.19□□□□□ -1.74
ECM1Q16610 RNA5SP475-201ENST00000410568 110 ntBASIC4.19□□□□□ -1.74
ECM1Q16610 CYCSP19-201ENST00000411715 316 ntBASIC4.19□□□□□ -1.74
ECM1Q16610 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC4.19□□□□□ -1.74
ECM1Q16610 NDUFB1P1-201ENST00000435191 180 ntBASIC4.19□□□□□ -1.74
ECM1Q16610 AC005042.3-201ENST00000453230 174 ntBASIC4.19□□□□□ -1.74
ECM1Q16610 AP000705.1-201ENST00000454567 350 ntBASIC4.19□□□□□ -1.74
ECM1Q16610 RNU6-625P-201ENST00000459412 107 ntBASIC4.19□□□□□ -1.74
ECM1Q16610 AC136475.4-201ENST00000534271 280 ntTSL 5 BASIC4.19□□□□□ -1.74
ECM1Q16610 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.19□□□□□ -1.74
ECM1Q16610 AC034105.4-201ENST00000568304 277 ntBASIC4.19□□□□□ -1.74
ECM1Q16610 AC008749.1-201ENST00000597650 306 ntBASIC4.19□□□□□ -1.74
ECM1Q16610 AL162424.1-201ENST00000602325 221 ntBASIC4.19□□□□□ -1.74
ECM1Q16610 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.19□□□□□ -1.74
ECM1Q16610 AL121772.2-201ENST00000614331 297 ntBASIC4.19□□□□□ -1.74
ECM1Q16610 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.19□□□□□ -1.74
ECM1Q16610 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.19□□□□□ -1.74
ECM1Q16610 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.19□□□□□ -1.74
ECM1Q16610 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ECM1Q16610 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ECM1Q16610 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.18□□□□□ -1.74
ECM1Q16610 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC4.18□□□□□ -1.74
ECM1Q16610 RNU6-655P-201ENST00000362858 107 ntBASIC4.18□□□□□ -1.74
ECM1Q16610 Y_RNA.441-201ENST00000384123 112 ntBASIC4.18□□□□□ -1.74
ECM1Q16610 Y_RNA.497-201ENST00000384447 98 ntBASIC4.18□□□□□ -1.74
ECM1Q16610 Y_RNA.568-201ENST00000384742 113 ntBASIC4.18□□□□□ -1.74
ECM1Q16610 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
ECM1Q16610 RNU6-131P-201ENST00000391144 107 ntBASIC4.18□□□□□ -1.74
ECM1Q16610 SNORA48.7-201ENST00000391302 135 ntBASIC4.18□□□□□ -1.74
ECM1Q16610 RNU4-30P-201ENST00000410245 143 ntBASIC4.18□□□□□ -1.74
ECM1Q16610 Y_RNA.597-201ENST00000410463 100 ntBASIC4.18□□□□□ -1.74
ECM1Q16610 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.18□□□□□ -1.74
ECM1Q16610 RPL36AP48-201ENST00000485521 314 ntBASIC4.18□□□□□ -1.74
ECM1Q16610 Y_RNA.679-201ENST00000516416 91 ntBASIC4.18□□□□□ -1.74
ECM1Q16610 AC006130.2-201ENST00000586202 326 ntBASIC4.18□□□□□ -1.74
ECM1Q16610 RPL17P51-201ENST00000605218 238 ntBASIC4.18□□□□□ -1.74
ECM1Q16610 CYSLTR1-201ENST00000373304 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
ECM1Q16610 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.18□□□□□ -1.74
ECM1Q16610 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
ECM1Q16610 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
ECM1Q16610 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ECM1Q16610 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
ECM1Q16610 MIR410-201ENST00000362222 80 ntBASIC4.17□□□□□ -1.74
ECM1Q16610 RNA5SP502-201ENST00000362694 119 ntBASIC4.17□□□□□ -1.74
ECM1Q16610 RNU6-1210P-201ENST00000363775 107 ntBASIC4.17□□□□□ -1.74
ECM1Q16610 U3.9-201ENST00000363823 204 ntBASIC4.17□□□□□ -1.74
ECM1Q16610 SNORD6-201ENST00000365444 73 ntBASIC4.17□□□□□ -1.74
ECM1Q16610 RNU6-102P-201ENST00000384485 104 ntBASIC4.17□□□□□ -1.74
ECM1Q16610 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
ECM1Q16610 Y_RNA.580-201ENST00000391004 95 ntBASIC4.17□□□□□ -1.74
ECM1Q16610 Y_RNA.586-201ENST00000391146 98 ntBASIC4.17□□□□□ -1.74
ECM1Q16610 HMGN2P8-201ENST00000391458 268 ntBASIC4.17□□□□□ -1.74
ECM1Q16610 RPL19P1-201ENST00000411635 428 ntBASIC4.17□□□□□ -1.74
ECM1Q16610 IGKV1OR9-2-201ENST00000431378 277 ntBASIC4.17□□□□□ -1.74
ECM1Q16610 AL160262.1-201ENST00000522264 254 ntTSL 3 BASIC4.17□□□□□ -1.74
ECM1Q16610 EIF4A1P12-201ENST00000551910 141 ntBASIC4.17□□□□□ -1.74
ECM1Q16610 AC018448.1-201ENST00000552843 316 ntBASIC4.17□□□□□ -1.74
ECM1Q16610 AC004148.1-201ENST00000571506 398 ntTSL 5 BASIC4.17□□□□□ -1.74
ECM1Q16610 uc_338.32-201ENST00000615087 172 ntBASIC4.17□□□□□ -1.74
ECM1Q16610 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
ECM1Q16610 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
ECM1Q16610 AC010733.2-201ENST00000589496 5702 ntBASIC4.17□□□□□ -1.74
ECM1Q16610 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.17□□□□□ -1.74
ECM1Q16610 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
ECM1Q16610 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
ECM1Q16610 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms