Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 MED28P2-201ENST00000475771 317 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC0.32□□□□□ -2.36
CACNA1EQ15878 AP002453.2-201ENST00000533503 320 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 VBP1-203ENST00000535916 944 ntTSL 2 BASIC0.32□□□□□ -2.36
CACNA1EQ15878 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC0.32□□□□□ -2.36
CACNA1EQ15878 MIR3146-201ENST00000580367 79 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 AF038458.1-201ENST00000588406 262 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 VN1R87P-201ENST00000596706 487 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 AF129408.1-201ENST00000608767 431 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 AC006386.1-201ENST00000619436 415 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC0.32□□□□□ -2.36
CACNA1EQ15878 AC130454.1-201ENST00000622948 401 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 AC068880.4-201ENST00000623082 495 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 AC017037.3-201ENST00000625016 472 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 AC106858.1-201ENST00000637497 429 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 ZNF736P9Y-201ENST00000439586 1345 ntBASIC0.32□□□□□ -2.36
CACNA1EQ15878 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.31□□□□□ -2.36
CACNA1EQ15878 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
CACNA1EQ15878 RNU4-1-201ENST00000363925 141 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 RNU6-1280P-201ENST00000365211 107 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 SUGT1P1-201ENST00000379514 476 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 RNU6-546P-201ENST00000383991 107 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 RNU6-39P-201ENST00000384344 107 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 MIR597-201ENST00000384968 97 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
CACNA1EQ15878 FCF1P10-201ENST00000407590 479 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 RNA5SP100-201ENST00000410903 110 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 RNA5SP59-201ENST00000410922 110 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 AC244670.1-201ENST00000436879 112 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 AL117351.1-201ENST00000438864 766 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC0.31□□□□□ -2.36
CACNA1EQ15878 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC0.31□□□□□ -2.36
CACNA1EQ15878 AL360271.2-201ENST00000447710 161 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 snoU13.9-201ENST00000458927 103 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 AC130509.1-201ENST00000464158 433 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 MTND1P3-201ENST00000484956 952 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 RPL30P1-201ENST00000488676 339 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 SNORA31.3-201ENST00000516029 96 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 SNORA31.17-201ENST00000516953 127 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.31□□□□□ -2.36
CACNA1EQ15878 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC0.31□□□□□ -2.36
CACNA1EQ15878 AC025678.1-201ENST00000567861 338 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 MIR5094-201ENST00000578766 85 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 AC018714.1-201ENST00000605028 208 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 AL022345.1-201ENST00000607292 135 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 AC006001.4-201ENST00000622243 395 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 CDR1-202ENST00000625883 1485 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 MIR302D-201ENST00000362275 68 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 AC119751.3-201ENST00000399720 670 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 AC009518.2-201ENST00000418056 731 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.31□□□□□ -2.36
CACNA1EQ15878 ISCA1P1-201ENST00000426679 387 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 RPL23AP95-201ENST00000426806 265 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 AL135790.2-201ENST00000437701 267 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 AC092001.1-201ENST00000453012 261 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 MTCYBP1-201ENST00000454315 1119 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC0.31□□□□□ -2.36
CACNA1EQ15878 AC093899.1-201ENST00000457984 376 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 SNORD124-201ENST00000459577 104 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.31□□□□□ -2.36
CACNA1EQ15878 AC116655.1-201ENST00000508324 901 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC0.31□□□□□ -2.36
CACNA1EQ15878 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC0.31□□□□□ -2.36
CACNA1EQ15878 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.31□□□□□ -2.36
CACNA1EQ15878 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC0.31□□□□□ -2.36
CACNA1EQ15878 ZNF321P-202ENST00000550843 495 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC0.31□□□□□ -2.36
CACNA1EQ15878 AC090186.1-201ENST00000605991 572 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 AC130324.3-201ENST00000614165 542 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 AP000943.4-201ENST00000622912 357 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 AC027335.2-201ENST00000624030 375 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 MIR1248-201ENST00000629190 106 ntBASIC0.31□□□□□ -2.36
CACNA1EQ15878 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC0.31□□□□□ -2.36
CACNA1EQ15878 AC092104.1-201ENST00000497346 1441 ntBASIC0.3□□□□□ -2.36
CACNA1EQ15878 ANKRD36BP1-202ENST00000604892 1417 ntBASIC0.3□□□□□ -2.36
CACNA1EQ15878 AC138393.1-203ENST00000327086 343 ntBASIC0.3□□□□□ -2.36
CACNA1EQ15878 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
CACNA1EQ15878 SNORD32A-201ENST00000364805 84 ntBASIC0.3□□□□□ -2.36
CACNA1EQ15878 SNORD1A-201ENST00000364968 72 ntBASIC0.3□□□□□ -2.36
CACNA1EQ15878 SNORA25-201ENST00000384384 134 ntBASIC0.3□□□□□ -2.36
CACNA1EQ15878 RNU6-1222P-201ENST00000384615 107 ntBASIC0.3□□□□□ -2.36
CACNA1EQ15878 MIR32-201ENST00000384965 70 ntBASIC0.3□□□□□ -2.36
CACNA1EQ15878 SNORA12.1-201ENST00000390873 148 ntBASIC0.3□□□□□ -2.36
CACNA1EQ15878 CBX3P9-201ENST00000402326 552 ntBASIC0.3□□□□□ -2.36
CACNA1EQ15878 RNA5SP266-201ENST00000410273 108 ntBASIC0.3□□□□□ -2.36
CACNA1EQ15878 AC069282.1-201ENST00000411911 526 ntBASIC0.3□□□□□ -2.36
CACNA1EQ15878 AC006461.1-201ENST00000412637 326 ntBASIC0.3□□□□□ -2.36
CACNA1EQ15878 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.3□□□□□ -2.36
CACNA1EQ15878 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC0.3□□□□□ -2.36
CACNA1EQ15878 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC0.3□□□□□ -2.36
CACNA1EQ15878 AC007547.1-201ENST00000462177 490 ntBASIC0.3□□□□□ -2.36
CACNA1EQ15878 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC0.3□□□□□ -2.36
CACNA1EQ15878 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.3□□□□□ -2.36
CACNA1EQ15878 RNU6-1225P-201ENST00000516336 65 ntBASIC0.3□□□□□ -2.36
CACNA1EQ15878 RNU6-586P-201ENST00000517265 104 ntBASIC0.3□□□□□ -2.36
CACNA1EQ15878 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC0.3□□□□□ -2.36
CACNA1EQ15878 AC022784.5-201ENST00000522241 437 ntBASIC0.3□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms