Protein–RNA interactions for Protein: Q07065

CKAP4, Cytoskeleton-associated protein 4, humanhuman

Known RBP Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4Q07065 AC012312.1-201ENST00000503710 527 ntTSL 2 BASIC1.87□□□□□ -2.11
CKAP4Q07065 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC1.87□□□□□ -2.11
CKAP4Q07065 RNU6-256P-201ENST00000516747 97 ntBASIC1.87□□□□□ -2.11
CKAP4Q07065 SNORA31.25-201ENST00000517242 134 ntBASIC1.87□□□□□ -2.11
CKAP4Q07065 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC1.87□□□□□ -2.11
CKAP4Q07065 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC1.87□□□□□ -2.11
CKAP4Q07065 AC100830.2-201ENST00000581636 240 ntBASIC1.87□□□□□ -2.11
CKAP4Q07065 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
CKAP4Q07065 AC009994.1-201ENST00000606889 253 ntBASIC1.87□□□□□ -2.11
CKAP4Q07065 AC025253.1-201ENST00000613623 543 ntBASIC1.87□□□□□ -2.11
CKAP4Q07065 AC093913.1-201ENST00000614178 329 ntBASIC1.87□□□□□ -2.11
CKAP4Q07065 AL138726.1-201ENST00000614873 333 ntBASIC1.87□□□□□ -2.11
CKAP4Q07065 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC1.87□□□□□ -2.11
CKAP4Q07065 SCARNA4-202ENST00000625402 129 ntBASIC1.87□□□□□ -2.11
CKAP4Q07065 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC1.87□□□□□ -2.11
CKAP4Q07065 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
CKAP4Q07065 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
CKAP4Q07065 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC1.86□□□□□ -2.11
CKAP4Q07065 AC138393.1-203ENST00000327086 343 ntBASIC1.86□□□□□ -2.11
CKAP4Q07065 RNA5SP387-201ENST00000364226 106 ntBASIC1.86□□□□□ -2.11
CKAP4Q07065 RNA5SP363-201ENST00000365072 115 ntBASIC1.86□□□□□ -2.11
CKAP4Q07065 RNU6-128P-201ENST00000383976 107 ntBASIC1.86□□□□□ -2.11
CKAP4Q07065 RNU1-148P-201ENST00000384472 162 ntBASIC1.86□□□□□ -2.11
CKAP4Q07065 RNU2-41P-201ENST00000410991 178 ntBASIC1.86□□□□□ -2.11
CKAP4Q07065 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.86□□□□□ -2.11
CKAP4Q07065 AC004383.1-201ENST00000438135 289 ntBASIC1.86□□□□□ -2.11
CKAP4Q07065 AL359672.1-201ENST00000442302 409 ntBASIC1.86□□□□□ -2.11
CKAP4Q07065 RPL32P28-201ENST00000443577 397 ntBASIC1.86□□□□□ -2.11
CKAP4Q07065 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.86□□□□□ -2.11
CKAP4Q07065 AC013470.1-201ENST00000453438 462 ntBASIC1.86□□□□□ -2.11
CKAP4Q07065 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC1.86□□□□□ -2.11
CKAP4Q07065 BTF3P15-201ENST00000455606 336 ntBASIC1.86□□□□□ -2.11
CKAP4Q07065 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.86□□□□□ -2.11
CKAP4Q07065 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CKAP4Q07065 RNU6-507P-201ENST00000516045 100 ntBASIC1.86□□□□□ -2.11
CKAP4Q07065 Y_RNA.687-201ENST00000516558 91 ntBASIC1.86□□□□□ -2.11
CKAP4Q07065 Y_RNA.691-201ENST00000516611 103 ntBASIC1.86□□□□□ -2.11
CKAP4Q07065 RNU7-30P-201ENST00000516835 62 ntBASIC1.86□□□□□ -2.11
CKAP4Q07065 RNU6-1088P-201ENST00000516850 104 ntBASIC1.86□□□□□ -2.11
CKAP4Q07065 SCARNA3-201ENST00000517097 143 ntBASIC1.86□□□□□ -2.11
CKAP4Q07065 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
CKAP4Q07065 AC090568.2-205ENST00000518631 576 ntTSL 4 BASIC1.86□□□□□ -2.11
CKAP4Q07065 RNU6-323P-201ENST00000521915 107 ntBASIC1.86□□□□□ -2.11
CKAP4Q07065 AP005597.4-201ENST00000526762 229 ntBASIC1.86□□□□□ -2.11
CKAP4Q07065 AC006199.1-201ENST00000548728 219 ntBASIC1.86□□□□□ -2.11
CKAP4Q07065 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.86□□□□□ -2.11
CKAP4Q07065 AC091135.1-201ENST00000585943 307 ntBASIC1.86□□□□□ -2.11
CKAP4Q07065 RNU6-85P-201ENST00000605989 107 ntBASIC1.86□□□□□ -2.11
CKAP4Q07065 AC005858.4-201ENST00000623191 700 ntBASIC1.86□□□□□ -2.11
CKAP4Q07065 MTND4P12-201ENST00000498999 1377 ntBASIC1.85□□□□□ -2.11
CKAP4Q07065 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.85□□□□□ -2.11
CKAP4Q07065 Y_RNA.70-201ENST00000362886 110 ntBASIC1.85□□□□□ -2.11
CKAP4Q07065 RNU6-1252P-201ENST00000363054 104 ntBASIC1.85□□□□□ -2.11
CKAP4Q07065 Y_RNA.263-201ENST00000364659 114 ntBASIC1.85□□□□□ -2.11
CKAP4Q07065 SNORD116-11-201ENST00000383882 92 ntBASIC1.85□□□□□ -2.11
CKAP4Q07065 RNU6-1013P-201ENST00000384180 107 ntBASIC1.85□□□□□ -2.11
CKAP4Q07065 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC1.85□□□□□ -2.11
CKAP4Q07065 AL135786.1-201ENST00000415892 214 ntBASIC1.85□□□□□ -2.11
CKAP4Q07065 AC003685.2-201ENST00000422795 395 ntBASIC1.85□□□□□ -2.11
CKAP4Q07065 AC006946.1-201ENST00000429106 328 ntBASIC1.85□□□□□ -2.11
CKAP4Q07065 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC1.85□□□□□ -2.11
CKAP4Q07065 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.85□□□□□ -2.11
CKAP4Q07065 snoU109.2-201ENST00000459316 135 ntBASIC1.85□□□□□ -2.11
CKAP4Q07065 AC080013.2-201ENST00000460866 323 ntBASIC1.85□□□□□ -2.11
CKAP4Q07065 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.85□□□□□ -2.11
CKAP4Q07065 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.85□□□□□ -2.11
CKAP4Q07065 SNORA31.6-201ENST00000516241 130 ntBASIC1.85□□□□□ -2.11
CKAP4Q07065 SNORD19.2-201ENST00000516978 73 ntBASIC1.85□□□□□ -2.11
CKAP4Q07065 RNU2-19P-201ENST00000517288 84 ntBASIC1.85□□□□□ -2.11
CKAP4Q07065 AP004607.1-201ENST00000524456 203 ntBASIC1.85□□□□□ -2.11
CKAP4Q07065 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.85□□□□□ -2.11
CKAP4Q07065 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.85□□□□□ -2.11
CKAP4Q07065 MIR1273D-201ENST00000577266 86 ntBASIC1.85□□□□□ -2.11
CKAP4Q07065 MIR3162-201ENST00000581818 82 ntBASIC1.85□□□□□ -2.11
CKAP4Q07065 AC007229.1-201ENST00000590455 412 ntBASIC1.85□□□□□ -2.11
CKAP4Q07065 AL670379.10-201ENST00000604330 253 ntBASIC1.85□□□□□ -2.11
CKAP4Q07065 AL670379.9-201ENST00000605428 253 ntBASIC1.85□□□□□ -2.11
CKAP4Q07065 uc_338.5-201ENST00000611839 155 ntBASIC1.85□□□□□ -2.11
CKAP4Q07065 AL133216.2-202ENST00000634512 349 ntBASIC1.85□□□□□ -2.11
CKAP4Q07065 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
CKAP4Q07065 TFEC-204ENST00000457268 6309 ntTSL 3 BASIC1.84□□□□□ -2.11
CKAP4Q07065 RNU6-37P-201ENST00000362692 107 ntBASIC1.84□□□□□ -2.11
CKAP4Q07065 Y_RNA.184-201ENST00000363884 108 ntBASIC1.84□□□□□ -2.11
CKAP4Q07065 RNU6-11P-201ENST00000364234 107 ntBASIC1.84□□□□□ -2.11
CKAP4Q07065 Y_RNA.339-201ENST00000365325 102 ntBASIC1.84□□□□□ -2.11
CKAP4Q07065 RNU6-1329P-201ENST00000365664 107 ntBASIC1.84□□□□□ -2.11
CKAP4Q07065 RNU6-25P-201ENST00000383873 107 ntBASIC1.84□□□□□ -2.11
CKAP4Q07065 RNU6-1-201ENST00000383898 107 ntBASIC1.84□□□□□ -2.11
CKAP4Q07065 RNU6-48P-201ENST00000384161 107 ntBASIC1.84□□□□□ -2.11
CKAP4Q07065 RNU6-36P-201ENST00000384172 107 ntBASIC1.84□□□□□ -2.11
CKAP4Q07065 RNU6-4P-201ENST00000384205 107 ntBASIC1.84□□□□□ -2.11
CKAP4Q07065 RNU6-5P-201ENST00000384238 107 ntBASIC1.84□□□□□ -2.11
CKAP4Q07065 RNU6-3P-201ENST00000384314 107 ntBASIC1.84□□□□□ -2.11
CKAP4Q07065 RNU6-16P-201ENST00000384385 107 ntBASIC1.84□□□□□ -2.11
CKAP4Q07065 RNU6-15P-201ENST00000384534 107 ntBASIC1.84□□□□□ -2.11
CKAP4Q07065 RNU6-2-201ENST00000384627 107 ntBASIC1.84□□□□□ -2.11
CKAP4Q07065 RNU6-29P-201ENST00000384637 107 ntBASIC1.84□□□□□ -2.11
CKAP4Q07065 RNU6-9-201ENST00000384776 107 ntBASIC1.84□□□□□ -2.11
CKAP4Q07065 RNU6-33P-201ENST00000384793 107 ntBASIC1.84□□□□□ -2.11
CKAP4Q07065 MIR218-1-201ENST00000384999 110 ntBASIC1.84□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 149.1 ms