Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 RNU5F-6P-201ENST00000362979 116 ntBASIC0.92□□□□□ -2.26
ACTBP60709 SNORD113-6-201ENST00000363345 75 ntBASIC0.92□□□□□ -2.26
ACTBP60709 RNU6-527P-201ENST00000363425 104 ntBASIC0.92□□□□□ -2.26
ACTBP60709 RNU6-1141P-201ENST00000364520 107 ntBASIC0.92□□□□□ -2.26
ACTBP60709 RNU6-392P-201ENST00000364926 101 ntBASIC0.92□□□□□ -2.26
ACTBP60709 SNORA25.9-201ENST00000365087 128 ntBASIC0.92□□□□□ -2.26
ACTBP60709 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC0.92□□□□□ -2.26
ACTBP60709 RNU6-968P-201ENST00000384076 107 ntBASIC0.92□□□□□ -2.26
ACTBP60709 SNORA12.2-201ENST00000391040 156 ntBASIC0.92□□□□□ -2.26
ACTBP60709 SNORA26.3-201ENST00000391119 136 ntBASIC0.92□□□□□ -2.26
ACTBP60709 MTCO3P41-201ENST00000414801 328 ntBASIC0.92□□□□□ -2.26
ACTBP60709 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC0.92□□□□□ -2.26
ACTBP60709 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.92□□□□□ -2.26
ACTBP60709 DYNLT3P2-201ENST00000442517 295 ntBASIC0.92□□□□□ -2.26
ACTBP60709 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.92□□□□□ -2.26
ACTBP60709 RPS23P4-201ENST00000487908 423 ntBASIC0.92□□□□□ -2.26
ACTBP60709 AC093852.1-201ENST00000503587 266 ntBASIC0.92□□□□□ -2.26
ACTBP60709 UBE2V1P12-201ENST00000503954 474 ntBASIC0.92□□□□□ -2.26
ACTBP60709 SUMO2P18-201ENST00000518873 252 ntBASIC0.92□□□□□ -2.26
ACTBP60709 AP002428.1-201ENST00000527345 380 ntTSL 3 BASIC0.92□□□□□ -2.26
ACTBP60709 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC0.92□□□□□ -2.26
ACTBP60709 AC012507.3-201ENST00000603556 477 ntBASIC0.92□□□□□ -2.26
ACTBP60709 AL031281.1-201ENST00000604049 488 ntBASIC0.92□□□□□ -2.26
ACTBP60709 AC069114.2-201ENST00000604699 304 ntBASIC0.92□□□□□ -2.26
ACTBP60709 AC105129.3-201ENST00000605455 485 ntBASIC0.92□□□□□ -2.26
ACTBP60709 AC004492.1-201ENST00000607036 742 ntBASIC0.92□□□□□ -2.26
ACTBP60709 RNU6-641P-201ENST00000384006 107 ntBASIC0.91□□□□□ -2.26
ACTBP60709 SNORA32.2-201ENST00000384049 122 ntBASIC0.91□□□□□ -2.26
ACTBP60709 RNU6-43P-201ENST00000384302 107 ntBASIC0.91□□□□□ -2.26
ACTBP60709 MIR194-1-201ENST00000384892 85 ntBASIC0.91□□□□□ -2.26
ACTBP60709 MRPL35P1-201ENST00000404272 572 ntBASIC0.91□□□□□ -2.26
ACTBP60709 RNA5SP111-201ENST00000411386 101 ntBASIC0.91□□□□□ -2.26
ACTBP60709 SNRPEP8-201ENST00000442866 260 ntBASIC0.91□□□□□ -2.26
ACTBP60709 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC0.91□□□□□ -2.26
ACTBP60709 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC0.91□□□□□ -2.26
ACTBP60709 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC0.91□□□□□ -2.26
ACTBP60709 AL009048.1-201ENST00000450437 298 ntBASIC0.91□□□□□ -2.26
ACTBP60709 AC013470.1-201ENST00000453438 462 ntBASIC0.91□□□□□ -2.26
ACTBP60709 RNA5SP269-201ENST00000459032 137 ntBASIC0.91□□□□□ -2.26
ACTBP60709 AC007547.1-201ENST00000462177 490 ntBASIC0.91□□□□□ -2.26
ACTBP60709 HMGN2P9-201ENST00000476875 229 ntBASIC0.91□□□□□ -2.26
ACTBP60709 AL133373.1-201ENST00000497098 94 ntBASIC0.91□□□□□ -2.26
ACTBP60709 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.91□□□□□ -2.26
ACTBP60709 AC027335.1-201ENST00000515377 543 ntTSL 4 BASIC0.91□□□□□ -2.26
ACTBP60709 RNA5SP481-201ENST00000516814 122 ntBASIC0.91□□□□□ -2.26
ACTBP60709 AC019176.1-201ENST00000518519 225 ntBASIC0.91□□□□□ -2.26
ACTBP60709 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.91□□□□□ -2.26
ACTBP60709 IL7-206ENST00000520269 456 ntTSL 3 BASIC0.91□□□□□ -2.26
ACTBP60709 AC022616.3-201ENST00000523940 148 ntBASIC0.91□□□□□ -2.26
ACTBP60709 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC0.91□□□□□ -2.26
ACTBP60709 AC087883.1-201ENST00000551882 391 ntBASIC0.91□□□□□ -2.26
ACTBP60709 BNIP3P16-201ENST00000589779 534 ntBASIC0.91□□□□□ -2.26
ACTBP60709 FAS-AS1.2-201ENST00000620386 170 ntBASIC0.91□□□□□ -2.26
ACTBP60709 AP000720.1-201ENST00000625091 483 ntBASIC0.91□□□□□ -2.26
ACTBP60709 AC099654.13-201ENST00000639774 207 ntBASIC0.91□□□□□ -2.26
ACTBP60709 AC010615.1-201ENST00000594254 1764 ntBASIC0.91□□□□□ -2.26
ACTBP60709 MTND4P9-201ENST00000507819 1346 ntBASIC0.9□□□□□ -2.26
ACTBP60709 RNU1-124P-201ENST00000363861 145 ntBASIC0.9□□□□□ -2.27
ACTBP60709 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC0.9□□□□□ -2.27
ACTBP60709 RN7SKP61-201ENST00000410642 295 ntBASIC0.9□□□□□ -2.27
ACTBP60709 AP000275.1-201ENST00000411943 390 ntBASIC0.9□□□□□ -2.27
ACTBP60709 MTCO1P21-201ENST00000416634 589 ntBASIC0.9□□□□□ -2.27
ACTBP60709 ELOCP4-201ENST00000420090 333 ntBASIC0.9□□□□□ -2.27
ACTBP60709 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC0.9□□□□□ -2.27
ACTBP60709 AC016925.1-201ENST00000458303 298 ntBASIC0.9□□□□□ -2.27
ACTBP60709 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC0.9□□□□□ -2.27
ACTBP60709 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC0.9□□□□□ -2.27
ACTBP60709 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.9□□□□□ -2.27
ACTBP60709 HMGB1P33-201ENST00000563485 527 ntBASIC0.9□□□□□ -2.27
ACTBP60709 PCMTD1P2-201ENST00000565017 355 ntBASIC0.9□□□□□ -2.27
ACTBP60709 MIR4661-201ENST00000582720 75 ntBASIC0.9□□□□□ -2.27
ACTBP60709 AC110760.3-201ENST00000598794 467 ntBASIC0.9□□□□□ -2.27
ACTBP60709 VN1R107P-201ENST00000601784 209 ntBASIC0.9□□□□□ -2.27
ACTBP60709 RNU6ATAC35P-201ENST00000609276 444 ntBASIC0.9□□□□□ -2.27
ACTBP60709 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC0.9□□□□□ -2.27
ACTBP60709 MIR8070-201ENST00000616510 88 ntBASIC0.9□□□□□ -2.27
ACTBP60709 Hammerhead_HH9.1-201ENST00000616606 77 ntBASIC0.9□□□□□ -2.27
ACTBP60709 AC138649.3-201ENST00000622154 254 ntBASIC0.9□□□□□ -2.27
ACTBP60709 RNU6-179P-201ENST00000363350 107 ntBASIC0.89□□□□□ -2.27
ACTBP60709 U3.4-201ENST00000363352 213 ntBASIC0.89□□□□□ -2.27
ACTBP60709 RNU6-501P-201ENST00000364072 100 ntBASIC0.89□□□□□ -2.27
ACTBP60709 SNORD32A-201ENST00000364805 84 ntBASIC0.89□□□□□ -2.27
ACTBP60709 RNU6-692P-201ENST00000384496 107 ntBASIC0.89□□□□□ -2.27
ACTBP60709 Y_RNA.576-201ENST00000384781 102 ntBASIC0.89□□□□□ -2.27
ACTBP60709 RPL23AP32-201ENST00000395315 459 ntBASIC0.89□□□□□ -2.27
ACTBP60709 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.89□□□□□ -2.27
ACTBP60709 C1DP2-201ENST00000418167 426 ntBASIC0.89□□□□□ -2.27
ACTBP60709 AL365184.2-201ENST00000431139 435 ntBASIC0.89□□□□□ -2.27
ACTBP60709 MTATP6P16-201ENST00000434543 526 ntBASIC0.89□□□□□ -2.27
ACTBP60709 AC244505.5-201ENST00000443639 207 ntBASIC0.89□□□□□ -2.27
ACTBP60709 AC132479.1-201ENST00000449160 144 ntBASIC0.89□□□□□ -2.27
ACTBP60709 AC114982.1-201ENST00000469402 321 ntBASIC0.89□□□□□ -2.27
ACTBP60709 HMGN1P7-201ENST00000491722 313 ntBASIC0.89□□□□□ -2.27
ACTBP60709 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.89□□□□□ -2.27
ACTBP60709 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC0.89□□□□□ -2.27
ACTBP60709 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC0.89□□□□□ -2.27
ACTBP60709 AC079140.3-201ENST00000511111 550 ntBASIC0.89□□□□□ -2.27
ACTBP60709 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC0.89□□□□□ -2.27
ACTBP60709 AC074344.1-201ENST00000512823 224 ntBASIC0.89□□□□□ -2.27
ACTBP60709 APELA-204ENST00000515275 551 ntAPPRIS P1 TSL 3 BASIC0.89□□□□□ -2.27
Retrieved 100 of 98,524 protein–RNA pairs in 184 ms