Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 ZNF355P-201ENST00000427301 3216 ntBASIC2.12□□□□□ -2.07
PEX3P56589 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.12□□□□□ -2.07
PEX3P56589 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.12□□□□□ -2.07
PEX3P56589 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.11□□□□□ -2.07
PEX3P56589 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC2.11□□□□□ -2.07
PEX3P56589 RNU6-254P-201ENST00000363377 107 ntBASIC2.11□□□□□ -2.07
PEX3P56589 RNU6-529P-201ENST00000363383 104 ntBASIC2.11□□□□□ -2.07
PEX3P56589 RNA5SP138-201ENST00000365098 114 ntBASIC2.11□□□□□ -2.07
PEX3P56589 RNU1-57P-201ENST00000384491 166 ntBASIC2.11□□□□□ -2.07
PEX3P56589 Y_RNA.573-201ENST00000384763 105 ntBASIC2.11□□□□□ -2.07
PEX3P56589 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
PEX3P56589 AC019129.1-201ENST00000403786 261 ntBASIC2.11□□□□□ -2.07
PEX3P56589 MIR1289-2-201ENST00000408360 111 ntBASIC2.11□□□□□ -2.07
PEX3P56589 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.11□□□□□ -2.07
PEX3P56589 AL445685.2-201ENST00000422551 342 ntBASIC2.11□□□□□ -2.07
PEX3P56589 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.11□□□□□ -2.07
PEX3P56589 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.11□□□□□ -2.07
PEX3P56589 RNU7-26P-201ENST00000458980 63 ntBASIC2.11□□□□□ -2.07
PEX3P56589 AC092989.1-201ENST00000481235 277 ntBASIC2.11□□□□□ -2.07
PEX3P56589 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC2.11□□□□□ -2.07
PEX3P56589 RNU6-377P-201ENST00000515965 102 ntBASIC2.11□□□□□ -2.07
PEX3P56589 AC087854.1-201ENST00000519706 414 ntBASIC2.11□□□□□ -2.07
PEX3P56589 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.11□□□□□ -2.07
PEX3P56589 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.11□□□□□ -2.07
PEX3P56589 AL139193.1-201ENST00000554967 539 ntTSL 4 BASIC2.11□□□□□ -2.07
PEX3P56589 AC023824.2-201ENST00000566185 400 ntBASIC2.11□□□□□ -2.07
PEX3P56589 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.11□□□□□ -2.07
PEX3P56589 AC002553.4-201ENST00000616896 331 ntBASIC2.11□□□□□ -2.07
PEX3P56589 AC006504.8-201ENST00000621046 635 ntBASIC2.11□□□□□ -2.07
PEX3P56589 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC2.11□□□□□ -2.07
PEX3P56589 MIR3662-201ENST00000637030 95 ntBASIC2.11□□□□□ -2.07
PEX3P56589 Clostridiales-1.3-201ENST00000637703 147 ntBASIC2.11□□□□□ -2.07
PEX3P56589 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
PEX3P56589 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC2.11□□□□□ -2.07
PEX3P56589 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
PEX3P56589 ATP8A2P2-201ENST00000437678 1568 ntBASIC2.1□□□□□ -2.07
PEX3P56589 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
PEX3P56589 SCN7A-206ENST00000619410 7186 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
PEX3P56589 SCN7A-207ENST00000621965 7186 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
PEX3P56589 SNORD114-19-201ENST00000363072 75 ntBASIC2.1□□□□□ -2.07
PEX3P56589 Y_RNA.135-201ENST00000363439 95 ntBASIC2.1□□□□□ -2.07
PEX3P56589 RNU6-1285P-201ENST00000363480 105 ntBASIC2.1□□□□□ -2.07
PEX3P56589 Y_RNA.157-201ENST00000363638 102 ntBASIC2.1□□□□□ -2.07
PEX3P56589 SNORD32A-201ENST00000364805 84 ntBASIC2.1□□□□□ -2.07
PEX3P56589 RNU6-1329P-201ENST00000365664 107 ntBASIC2.1□□□□□ -2.07
PEX3P56589 RNU6-877P-201ENST00000383868 107 ntBASIC2.1□□□□□ -2.07
PEX3P56589 RNU6-692P-201ENST00000384496 107 ntBASIC2.1□□□□□ -2.07
PEX3P56589 MIR95-201ENST00000385072 81 ntBASIC2.1□□□□□ -2.07
PEX3P56589 RNU6-373P-201ENST00000411247 98 ntBASIC2.1□□□□□ -2.07
PEX3P56589 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.1□□□□□ -2.07
PEX3P56589 AL513185.2-201ENST00000425543 193 ntBASIC2.1□□□□□ -2.07
PEX3P56589 NDUFA5P4-201ENST00000436704 385 ntBASIC2.1□□□□□ -2.07
PEX3P56589 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC2.1□□□□□ -2.07
PEX3P56589 AL359672.1-201ENST00000442302 409 ntBASIC2.1□□□□□ -2.07
PEX3P56589 MTCO2P3-201ENST00000442543 421 ntBASIC2.1□□□□□ -2.07
PEX3P56589 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.1□□□□□ -2.07
PEX3P56589 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC2.1□□□□□ -2.07
PEX3P56589 AL121594.1-201ENST00000475906 575 ntBASIC2.1□□□□□ -2.07
PEX3P56589 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.1□□□□□ -2.07
PEX3P56589 AC103996.1-201ENST00000555468 102 ntBASIC2.1□□□□□ -2.07
PEX3P56589 AC110588.1-201ENST00000559699 137 ntBASIC2.1□□□□□ -2.07
PEX3P56589 MIR5571-201ENST00000577998 113 ntBASIC2.1□□□□□ -2.07
PEX3P56589 AC100830.2-201ENST00000581636 240 ntBASIC2.1□□□□□ -2.07
PEX3P56589 AC073410.2-201ENST00000603240 332 ntBASIC2.1□□□□□ -2.07
PEX3P56589 AC107304.1-201ENST00000604229 296 ntBASIC2.1□□□□□ -2.07
PEX3P56589 ELOCP5-201ENST00000604924 333 ntBASIC2.1□□□□□ -2.07
PEX3P56589 AC064836.2-201ENST00000609491 462 ntBASIC2.1□□□□□ -2.07
PEX3P56589 HMGB1P24-202ENST00000615653 685 ntBASIC2.1□□□□□ -2.07
PEX3P56589 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC2.1□□□□□ -2.07
PEX3P56589 AC241585.2-209ENST00000638217 143 ntBASIC2.1□□□□□ -2.07
PEX3P56589 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
PEX3P56589 AC002543.1-201ENST00000299783 1954 ntBASIC2.1□□□□□ -2.07
PEX3P56589 PYGO1-201ENST00000302000 8488 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
PEX3P56589 OR56A5-201ENST00000340110 738 ntBASIC2.09□□□□□ -2.07
PEX3P56589 Y_RNA.100-201ENST00000363141 102 ntBASIC2.09□□□□□ -2.07
PEX3P56589 Y_RNA.530-201ENST00000384587 101 ntBASIC2.09□□□□□ -2.07
PEX3P56589 RPL30P16-201ENST00000419341 429 ntBASIC2.09□□□□□ -2.07
PEX3P56589 RPL23AP95-201ENST00000426806 265 ntBASIC2.09□□□□□ -2.07
PEX3P56589 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC2.09□□□□□ -2.07
PEX3P56589 AL031274.1-201ENST00000450334 232 ntBASIC2.09□□□□□ -2.07
PEX3P56589 RNU6-323P-201ENST00000521915 107 ntBASIC2.09□□□□□ -2.07
PEX3P56589 CYCSP26-201ENST00000534107 320 ntBASIC2.09□□□□□ -2.07
PEX3P56589 AC025423.5-201ENST00000550230 219 ntBASIC2.09□□□□□ -2.07
PEX3P56589 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.09□□□□□ -2.07
PEX3P56589 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC2.09□□□□□ -2.07
PEX3P56589 AL133241.1-201ENST00000556832 487 ntBASIC2.09□□□□□ -2.07
PEX3P56589 AC091135.1-201ENST00000585943 307 ntBASIC2.09□□□□□ -2.07
PEX3P56589 AL158827.2-201ENST00000602494 330 ntBASIC2.09□□□□□ -2.07
PEX3P56589 AP000907.4-201ENST00000604143 237 ntBASIC2.09□□□□□ -2.07
PEX3P56589 AL357078.3-201ENST00000607528 618 ntBASIC2.09□□□□□ -2.07
PEX3P56589 uc_338.15-201ENST00000615470 191 ntBASIC2.09□□□□□ -2.07
PEX3P56589 AL691447.3-201ENST00000635020 330 ntBASIC2.09□□□□□ -2.07
PEX3P56589 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
PEX3P56589 AL356292.1-201ENST00000283110 373 ntBASIC2.08□□□□□ -2.08
PEX3P56589 RNA5SP125-201ENST00000364843 120 ntBASIC2.08□□□□□ -2.08
PEX3P56589 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
PEX3P56589 RNU6-1222P-201ENST00000384615 107 ntBASIC2.08□□□□□ -2.08
PEX3P56589 RNU6ATAC25P-201ENST00000408798 117 ntBASIC2.08□□□□□ -2.08
PEX3P56589 RNU6-293P-201ENST00000411259 106 ntBASIC2.08□□□□□ -2.08
PEX3P56589 AL591043.1-201ENST00000432461 424 ntBASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 118.1 ms