Protein–RNA interactions for Protein: P53420

COL4A4, Collagen alpha-4(IV) chain, humanhuman

Predicted RBP Predictions only

Length 1,690 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A4P53420 RNU6-754P-201ENST00000391166 107 ntBASIC1.94□□□□□ -2.1
COL4A4P53420 MIR450B-201ENST00000401182 78 ntBASIC1.94□□□□□ -2.1
COL4A4P53420 AC004965.1-201ENST00000413033 213 ntBASIC1.94□□□□□ -2.1
COL4A4P53420 MTCYBP10-201ENST00000424905 650 ntBASIC1.94□□□□□ -2.1
COL4A4P53420 AC008267.5-201ENST00000424928 265 ntBASIC1.94□□□□□ -2.1
COL4A4P53420 RPS15AP27-201ENST00000449183 343 ntBASIC1.94□□□□□ -2.1
COL4A4P53420 SNORD5.1-201ENST00000458800 75 ntBASIC1.94□□□□□ -2.1
COL4A4P53420 SCARNA18-201ENST00000459004 134 ntBASIC1.94□□□□□ -2.1
COL4A4P53420 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC1.94□□□□□ -2.1
COL4A4P53420 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC1.94□□□□□ -2.1
COL4A4P53420 COX7A2P2-201ENST00000505291 250 ntBASIC1.94□□□□□ -2.1
COL4A4P53420 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.94□□□□□ -2.1
COL4A4P53420 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC1.94□□□□□ -2.1
COL4A4P53420 RNU6-202P-201ENST00000515998 96 ntBASIC1.94□□□□□ -2.1
COL4A4P53420 RNU6-976P-201ENST00000516086 111 ntBASIC1.94□□□□□ -2.1
COL4A4P53420 RNU4ATAC7P-201ENST00000516280 125 ntBASIC1.94□□□□□ -2.1
COL4A4P53420 RNU6-388P-201ENST00000517012 105 ntBASIC1.94□□□□□ -2.1
COL4A4P53420 RNU6-389P-201ENST00000517048 105 ntBASIC1.94□□□□□ -2.1
COL4A4P53420 AC009902.1-201ENST00000519351 183 ntBASIC1.94□□□□□ -2.1
COL4A4P53420 AC090615.1-201ENST00000577519 154 ntBASIC1.94□□□□□ -2.1
COL4A4P53420 MIR4448-201ENST00000584360 86 ntBASIC1.94□□□□□ -2.1
COL4A4P53420 AC062037.2-201ENST00000610137 73 ntBASIC1.94□□□□□ -2.1
COL4A4P53420 AC022709.1-201ENST00000615967 87 ntBASIC1.94□□□□□ -2.1
COL4A4P53420 AC098657.3-201ENST00000620434 263 ntBASIC1.94□□□□□ -2.1
COL4A4P53420 AL353748.2-201ENST00000622148 471 ntBASIC1.94□□□□□ -2.1
COL4A4P53420 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
COL4A4P53420 AC121333.1-201ENST00000567488 2709 ntBASIC1.94□□□□□ -2.1
COL4A4P53420 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC1.94□□□□□ -2.1
COL4A4P53420 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
COL4A4P53420 RNU6-1287P-201ENST00000362914 107 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 RNU6-1078P-201ENST00000364522 103 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 Y_RNA.257-201ENST00000364596 102 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 SET-203ENST00000372688 801 ntTSL 2 BASIC1.93□□□□□ -2.1
COL4A4P53420 RNU6-641P-201ENST00000384006 107 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 Y_RNA.463-201ENST00000384271 102 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 Y_RNA.496-201ENST00000384444 101 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 RNU6-601P-201ENST00000384540 107 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 RNU6-1060P-201ENST00000384664 107 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 RNU2-36P-201ENST00000410361 191 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 Y_RNA.646-201ENST00000410980 101 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.93□□□□□ -2.1
COL4A4P53420 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC1.93□□□□□ -2.1
COL4A4P53420 AC096644.2-201ENST00000429278 159 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 SNAP23P1-201ENST00000433229 246 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 AC108059.3-201ENST00000456388 214 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 RNU7-180P-201ENST00000459240 63 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 AC006483.1-201ENST00000487308 313 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 MRPS35P2-201ENST00000508242 191 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 AC116655.1-201ENST00000508324 901 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 AC104806.1-201ENST00000508720 308 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 AC107393.1-201ENST00000512403 346 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 RNU7-51P-201ENST00000516560 62 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 RNU6-1069P-201ENST00000516612 133 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 AP004242.1-201ENST00000533701 349 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 AC026371.1-201ENST00000551867 419 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 AC006270.2-201ENST00000578523 652 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 AL590099.1-201ENST00000615276 138 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 PISRT1.1-201ENST00000616930 107 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 uc_338.34-201ENST00000617467 174 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 AC141273.2-201ENST00000618989 130 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 AL596245.1-201ENST00000618994 362 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 AL159153.1-201ENST00000619688 317 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 U6.114-201ENST00000636407 96 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 AL139811.1-201ENST00000424779 2299 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 MFF-206ENST00000392059 1710 ntTSL 5 BASIC1.93□□□□□ -2.1
COL4A4P53420 MTND5P35-201ENST00000557537 1720 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 AC005592.1-201ENST00000566527 1640 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 AC008568.2-201ENST00000623862 2313 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC1.93□□□□□ -2.1
COL4A4P53420 CDC27P3-201ENST00000635418 1910 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 RNU6-1115P-201ENST00000362490 106 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 RNU6-97P-201ENST00000363387 104 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 RNU6-511P-201ENST00000363496 107 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 Y_RNA.148-201ENST00000363557 117 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 RNU6-99P-201ENST00000364721 107 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 RNU6-310P-201ENST00000384655 107 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 EIF4E2P1-201ENST00000393781 255 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 DSTNP4-201ENST00000399472 474 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 MIR548I3-201ENST00000408378 149 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 MIR548I1-201ENST00000408810 149 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 RNU6-101P-201ENST00000410323 104 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 RNU2-47P-201ENST00000410649 186 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 POLHP1-201ENST00000411806 470 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 AC027124.2-201ENST00000428249 105 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 MED13P1-201ENST00000428342 171 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC1.93□□□□□ -2.1
COL4A4P53420 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC1.93□□□□□ -2.1
COL4A4P53420 DYNLT3P2-201ENST00000442517 295 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 RPS26P56-201ENST00000444468 240 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 AC090255.1-201ENST00000495779 349 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 AC104136.1-201ENST00000512969 394 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 AL137161.1-201ENST00000532231 390 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC1.93□□□□□ -2.1
COL4A4P53420 MIR4790-201ENST00000577799 79 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 AC125232.2-201ENST00000592457 143 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 AC016727.2-201ENST00000603988 621 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 NUTF2P8-201ENST00000604593 363 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 AC018889.1-201ENST00000605372 397 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 Xist_exon1.1-201ENST00000618930 85 ntBASIC1.93□□□□□ -2.1
COL4A4P53420 AC103705.1-201ENST00000619013 241 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 137.1 ms