Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AL445687.1-201ENST00000439946 251 ntBASIC2.33□□□□□ -2.04
PDX1P52945 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.33□□□□□ -2.04
PDX1P52945 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.33□□□□□ -2.04
PDX1P52945 AL121594.1-201ENST00000475906 575 ntBASIC2.33□□□□□ -2.04
PDX1P52945 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC2.33□□□□□ -2.04
PDX1P52945 AC090096.1-201ENST00000489168 390 ntBASIC2.33□□□□□ -2.04
PDX1P52945 AC140059.1-201ENST00000489238 361 ntBASIC2.33□□□□□ -2.04
PDX1P52945 RPL22P13-201ENST00000493291 347 ntBASIC2.33□□□□□ -2.04
PDX1P52945 AIG1P1-201ENST00000503376 148 ntBASIC2.33□□□□□ -2.04
PDX1P52945 AC103851.1-201ENST00000506833 274 ntBASIC2.33□□□□□ -2.04
PDX1P52945 RNU6-566P-201ENST00000516790 107 ntBASIC2.33□□□□□ -2.04
PDX1P52945 RNU7-30P-201ENST00000516835 62 ntBASIC2.33□□□□□ -2.04
PDX1P52945 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.33□□□□□ -2.04
PDX1P52945 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC2.33□□□□□ -2.04
PDX1P52945 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.33□□□□□ -2.04
PDX1P52945 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.33□□□□□ -2.04
PDX1P52945 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.33□□□□□ -2.04
PDX1P52945 AC093249.1-201ENST00000567049 203 ntBASIC2.33□□□□□ -2.04
PDX1P52945 AL356575.1-201ENST00000603008 283 ntBASIC2.33□□□□□ -2.04
PDX1P52945 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.33□□□□□ -2.04
PDX1P52945 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
PDX1P52945 ENAM-201ENST00000396073 5679 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PDX1P52945 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
PDX1P52945 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
PDX1P52945 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.33□□□□□ -2.04
PDX1P52945 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
PDX1P52945 AC002543.1-201ENST00000299783 1954 ntBASIC2.32□□□□□ -2.04
PDX1P52945 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.32□□□□□ -2.04
PDX1P52945 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.32□□□□□ -2.04
PDX1P52945 AC016717.2-201ENST00000609089 5141 ntBASIC2.32□□□□□ -2.04
PDX1P52945 RNU6-1285P-201ENST00000363480 105 ntBASIC2.32□□□□□ -2.04
PDX1P52945 Y_RNA.166-201ENST00000363730 102 ntBASIC2.32□□□□□ -2.04
PDX1P52945 SNORD81.2-201ENST00000365153 76 ntBASIC2.32□□□□□ -2.04
PDX1P52945 RNU6-1013P-201ENST00000384180 107 ntBASIC2.32□□□□□ -2.04
PDX1P52945 RNU6-1222P-201ENST00000384615 107 ntBASIC2.32□□□□□ -2.04
PDX1P52945 RNU6-1106P-201ENST00000390845 107 ntBASIC2.32□□□□□ -2.04
PDX1P52945 MIR548F5-201ENST00000408421 86 ntBASIC2.32□□□□□ -2.04
PDX1P52945 AC098614.3-201ENST00000438957 440 ntBASIC2.32□□□□□ -2.04
PDX1P52945 MTATP6P23-201ENST00000440153 476 ntBASIC2.32□□□□□ -2.04
PDX1P52945 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC2.32□□□□□ -2.04
PDX1P52945 AL353705.4-201ENST00000449661 238 ntBASIC2.32□□□□□ -2.04
PDX1P52945 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.32□□□□□ -2.04
PDX1P52945 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC2.32□□□□□ -2.04
PDX1P52945 snoU13.14-201ENST00000459372 104 ntBASIC2.32□□□□□ -2.04
PDX1P52945 Y_RNA.638-201ENST00000459374 113 ntBASIC2.32□□□□□ -2.04
PDX1P52945 AC090515.1-201ENST00000465295 476 ntBASIC2.32□□□□□ -2.04
PDX1P52945 RPL9P9-202ENST00000466501 579 ntBASIC2.32□□□□□ -2.04
PDX1P52945 MTND4P17-201ENST00000470444 350 ntBASIC2.32□□□□□ -2.04
PDX1P52945 MTCO1P29-201ENST00000496868 288 ntBASIC2.32□□□□□ -2.04
PDX1P52945 RPS27P27-201ENST00000498779 255 ntBASIC2.32□□□□□ -2.04
PDX1P52945 RNA5SP281-201ENST00000516504 135 ntBASIC2.32□□□□□ -2.04
PDX1P52945 AL121579.1-201ENST00000555129 305 ntBASIC2.32□□□□□ -2.04
PDX1P52945 AC105137.2-201ENST00000569073 466 ntBASIC2.32□□□□□ -2.04
PDX1P52945 MIR1273D-201ENST00000577266 86 ntBASIC2.32□□□□□ -2.04
PDX1P52945 MIR4790-201ENST00000577799 79 ntBASIC2.32□□□□□ -2.04
PDX1P52945 CPDP1-201ENST00000579660 283 ntBASIC2.32□□□□□ -2.04
PDX1P52945 AL713866.2-201ENST00000603579 219 ntBASIC2.32□□□□□ -2.04
PDX1P52945 MIR3976-201ENST00000606807 139 ntBASIC2.32□□□□□ -2.04
PDX1P52945 AC069294.1-201ENST00000608397 350 ntBASIC2.32□□□□□ -2.04
PDX1P52945 AL133215.3-201ENST00000609801 448 ntBASIC2.32□□□□□ -2.04
PDX1P52945 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.32□□□□□ -2.04
PDX1P52945 uc_338.15-201ENST00000615470 191 ntBASIC2.32□□□□□ -2.04
PDX1P52945 SNORA43.4-201ENST00000629559 138 ntBASIC2.32□□□□□ -2.04
PDX1P52945 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.32□□□□□ -2.04
PDX1P52945 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
PDX1P52945 MTND5P6-201ENST00000422338 1798 ntBASIC2.31□□□□□ -2.04
PDX1P52945 AC069528.2-201ENST00000624849 1991 ntBASIC2.31□□□□□ -2.04
PDX1P52945 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
PDX1P52945 MIR764-201ENST00000390811 85 ntBASIC2.31□□□□□ -2.04
PDX1P52945 MIR1289-2-201ENST00000408360 111 ntBASIC2.31□□□□□ -2.04
PDX1P52945 U6atac.2-201ENST00000408644 118 ntBASIC2.31□□□□□ -2.04
PDX1P52945 AP000275.1-201ENST00000411943 390 ntBASIC2.31□□□□□ -2.04
PDX1P52945 AC007064.1-201ENST00000412238 351 ntBASIC2.31□□□□□ -2.04
PDX1P52945 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.31□□□□□ -2.04
PDX1P52945 RPL23AP95-201ENST00000426806 265 ntBASIC2.31□□□□□ -2.04
PDX1P52945 RPS12P2-201ENST00000439728 269 ntBASIC2.31□□□□□ -2.04
PDX1P52945 LINC01710-201ENST00000446002 390 ntTSL 5 BASIC2.31□□□□□ -2.04
PDX1P52945 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC2.31□□□□□ -2.04
PDX1P52945 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.31□□□□□ -2.04
PDX1P52945 AC073901.1-201ENST00000462471 408 ntBASIC2.31□□□□□ -2.04
PDX1P52945 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.31□□□□□ -2.04
PDX1P52945 MTND5P5-201ENST00000503764 376 ntBASIC2.31□□□□□ -2.04
PDX1P52945 AC046134.1-201ENST00000514454 666 ntBASIC2.31□□□□□ -2.04
PDX1P52945 RNU2-53P-201ENST00000516257 147 ntBASIC2.31□□□□□ -2.04
PDX1P52945 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC2.31□□□□□ -2.04
PDX1P52945 AC021269.2-201ENST00000532318 330 ntBASIC2.31□□□□□ -2.04
PDX1P52945 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
PDX1P52945 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.31□□□□□ -2.04
PDX1P52945 AC060766.3-201ENST00000591442 263 ntBASIC2.31□□□□□ -2.04
PDX1P52945 AL355073.2-201ENST00000612106 557 ntBASIC2.31□□□□□ -2.04
PDX1P52945 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.31□□□□□ -2.04
PDX1P52945 AC009233.1-201ENST00000616477 371 ntBASIC2.31□□□□□ -2.04
PDX1P52945 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.3□□□□□ -2.04
PDX1P52945 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.3□□□□□ -2.04
PDX1P52945 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
PDX1P52945 RNU6-1032P-201ENST00000384100 107 ntBASIC2.3□□□□□ -2.04
PDX1P52945 MIR517A-201ENST00000385001 87 ntBASIC2.3□□□□□ -2.04
PDX1P52945 AL079342.1-201ENST00000401460 267 ntBASIC2.3□□□□□ -2.04
PDX1P52945 AL356432.1-201ENST00000405809 419 ntBASIC2.3□□□□□ -2.04
PDX1P52945 RN7SKP32-201ENST00000410167 303 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 155.1 ms