Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 Y_RNA.414-201ENST00000384011 101 ntBASIC2.27□□□□□ -2.05
LHX1P48742 SNORA64-201ENST00000384674 134 ntBASIC2.27□□□□□ -2.05
LHX1P48742 SNORA80E-201ENST00000384744 137 ntBASIC2.27□□□□□ -2.05
LHX1P48742 MIR95-201ENST00000385072 81 ntBASIC2.27□□□□□ -2.05
LHX1P48742 VN1R36P-201ENST00000414936 291 ntBASIC2.27□□□□□ -2.05
LHX1P48742 ZNF885P-201ENST00000420174 1098 ntBASIC2.27□□□□□ -2.05
LHX1P48742 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.27□□□□□ -2.05
LHX1P48742 AL031659.1-201ENST00000447075 539 ntBASIC2.27□□□□□ -2.05
LHX1P48742 AL353752.1-201ENST00000454946 260 ntBASIC2.27□□□□□ -2.05
LHX1P48742 AMD1P1-201ENST00000457220 922 ntBASIC2.27□□□□□ -2.05
LHX1P48742 RNU7-66P-201ENST00000459469 62 ntBASIC2.27□□□□□ -2.05
LHX1P48742 U8.21-201ENST00000459536 136 ntBASIC2.27□□□□□ -2.05
LHX1P48742 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.27□□□□□ -2.05
LHX1P48742 AC107222.1-201ENST00000510899 637 ntBASIC2.27□□□□□ -2.05
LHX1P48742 RNU5F-2P-201ENST00000516066 82 ntBASIC2.27□□□□□ -2.05
LHX1P48742 RNU6-1314P-201ENST00000517139 104 ntBASIC2.27□□□□□ -2.05
LHX1P48742 IGKV3-31-201ENST00000523109 329 ntBASIC2.27□□□□□ -2.05
LHX1P48742 HSPE1P4-201ENST00000550617 308 ntBASIC2.27□□□□□ -2.05
LHX1P48742 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.27□□□□□ -2.05
LHX1P48742 TRAV32-201ENST00000553993 340 ntBASIC2.27□□□□□ -2.05
LHX1P48742 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.27□□□□□ -2.05
LHX1P48742 SNORA59B-202ENST00000578183 701 ntBASIC2.27□□□□□ -2.05
LHX1P48742 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC2.27□□□□□ -2.05
LHX1P48742 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.27□□□□□ -2.05
LHX1P48742 U4atac.1-201ENST00000618345 95 ntBASIC2.27□□□□□ -2.05
LHX1P48742 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
LHX1P48742 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LHX1P48742 SNORD32A-201ENST00000364805 84 ntBASIC2.26□□□□□ -2.05
LHX1P48742 AP000275.1-201ENST00000411943 390 ntBASIC2.26□□□□□ -2.05
LHX1P48742 AC244670.1-201ENST00000436879 112 ntBASIC2.26□□□□□ -2.05
LHX1P48742 MTATP6P13-201ENST00000438531 667 ntBASIC2.26□□□□□ -2.05
LHX1P48742 NFU1P2-201ENST00000448700 469 ntBASIC2.26□□□□□ -2.05
LHX1P48742 FGF7P6-202ENST00000451282 293 ntBASIC2.26□□□□□ -2.05
LHX1P48742 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC2.26□□□□□ -2.05
LHX1P48742 RPL9P9-202ENST00000466501 579 ntBASIC2.26□□□□□ -2.05
LHX1P48742 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC2.26□□□□□ -2.05
LHX1P48742 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.26□□□□□ -2.05
LHX1P48742 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC2.26□□□□□ -2.05
LHX1P48742 RNU6-612P-201ENST00000516909 102 ntBASIC2.26□□□□□ -2.05
LHX1P48742 SNORA48.11-201ENST00000517015 89 ntBASIC2.26□□□□□ -2.05
LHX1P48742 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.26□□□□□ -2.05
LHX1P48742 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.26□□□□□ -2.05
LHX1P48742 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.26□□□□□ -2.05
LHX1P48742 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.26□□□□□ -2.05
LHX1P48742 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.26□□□□□ -2.05
LHX1P48742 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
LHX1P48742 AL137847.3-201ENST00000611521 109 ntBASIC2.26□□□□□ -2.05
LHX1P48742 AP000560.1-201ENST00000624150 1937 ntBASIC2.26□□□□□ -2.05
LHX1P48742 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.26□□□□□ -2.05
LHX1P48742 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
LHX1P48742 MTND4P5-201ENST00000435821 1374 ntBASIC2.25□□□□□ -2.05
LHX1P48742 RNU6-1317P-201ENST00000364582 104 ntBASIC2.25□□□□□ -2.05
LHX1P48742 MIR144-201ENST00000384886 86 ntBASIC2.25□□□□□ -2.05
LHX1P48742 MIR29B2-201ENST00000385055 81 ntBASIC2.25□□□□□ -2.05
LHX1P48742 MIR1261-201ENST00000408659 82 ntBASIC2.25□□□□□ -2.05
LHX1P48742 MARCH7-203ENST00000409591 2147 ntTSL 2 BASIC2.25□□□□□ -2.05
LHX1P48742 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC2.25□□□□□ -2.05
LHX1P48742 AL513185.2-201ENST00000425543 193 ntBASIC2.25□□□□□ -2.05
LHX1P48742 MTCO3P18-201ENST00000440206 761 ntBASIC2.25□□□□□ -2.05
LHX1P48742 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC2.25□□□□□ -2.05
LHX1P48742 AC022447.4-201ENST00000504053 364 ntBASIC2.25□□□□□ -2.05
LHX1P48742 RNU6-256P-201ENST00000516747 97 ntBASIC2.25□□□□□ -2.05
LHX1P48742 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC2.25□□□□□ -2.05
LHX1P48742 SCOCP1-201ENST00000554676 349 ntBASIC2.25□□□□□ -2.05
LHX1P48742 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.25□□□□□ -2.05
LHX1P48742 MIR3136-201ENST00000583498 78 ntBASIC2.25□□□□□ -2.05
LHX1P48742 AC068944.2-201ENST00000610373 403 ntBASIC2.25□□□□□ -2.05
LHX1P48742 AC093913.1-201ENST00000614178 329 ntBASIC2.25□□□□□ -2.05
LHX1P48742 AC006504.8-201ENST00000621046 635 ntBASIC2.25□□□□□ -2.05
LHX1P48742 SNORD98-201ENST00000636377 67 ntBASIC2.25□□□□□ -2.05
LHX1P48742 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.25□□□□□ -2.05
LHX1P48742 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LHX1P48742 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.24□□□□□ -2.05
LHX1P48742 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LHX1P48742 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
LHX1P48742 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LHX1P48742 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
LHX1P48742 SNORA67.3-201ENST00000384366 140 ntBASIC2.24□□□□□ -2.05
LHX1P48742 RNU6-1274P-201ENST00000384557 107 ntBASIC2.24□□□□□ -2.05
LHX1P48742 MIR561-201ENST00000385216 97 ntBASIC2.24□□□□□ -2.05
LHX1P48742 BTF3L4P2-201ENST00000392798 346 ntBASIC2.24□□□□□ -2.05
LHX1P48742 AL591034.2-201ENST00000402839 359 ntBASIC2.24□□□□□ -2.05
LHX1P48742 AL023284.1-201ENST00000403956 276 ntBASIC2.24□□□□□ -2.05
LHX1P48742 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.24□□□□□ -2.05
LHX1P48742 RN7SKP61-201ENST00000410642 295 ntBASIC2.24□□□□□ -2.05
LHX1P48742 AL590135.1-201ENST00000422215 156 ntBASIC2.24□□□□□ -2.05
LHX1P48742 AL590556.1-201ENST00000423231 483 ntBASIC2.24□□□□□ -2.05
LHX1P48742 AC019205.3-201ENST00000424573 156 ntBASIC2.24□□□□□ -2.05
LHX1P48742 RPL23AP95-201ENST00000426806 265 ntBASIC2.24□□□□□ -2.05
LHX1P48742 AC078809.1-201ENST00000427601 140 ntBASIC2.24□□□□□ -2.05
LHX1P48742 AC016700.2-201ENST00000446011 156 ntBASIC2.24□□□□□ -2.05
LHX1P48742 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.24□□□□□ -2.05
LHX1P48742 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.24□□□□□ -2.05
LHX1P48742 AC015911.1-201ENST00000495111 156 ntBASIC2.24□□□□□ -2.05
LHX1P48742 MTCO1P29-201ENST00000496868 288 ntBASIC2.24□□□□□ -2.05
LHX1P48742 HMGB1P35-201ENST00000503360 598 ntBASIC2.24□□□□□ -2.05
LHX1P48742 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC2.24□□□□□ -2.05
LHX1P48742 AC016632.1-201ENST00000503994 196 ntBASIC2.24□□□□□ -2.05
LHX1P48742 AC096745.1-201ENST00000509945 370 ntBASIC2.24□□□□□ -2.05
LHX1P48742 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.24□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms