Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 AL450472.1-202ENST00000637286 180 ntBASIC2.7□□□□□ -1.98
SOX2P48431 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.7□□□□□ -1.98
SOX2P48431 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SOX2P48431 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
SOX2P48431 AL109809.4-201ENST00000603520 2185 ntBASIC2.7□□□□□ -1.98
SOX2P48431 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC2.69□□□□□ -1.98
SOX2P48431 AL161431.1-201ENST00000618966 4205 ntBASIC2.69□□□□□ -1.98
SOX2P48431 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
SOX2P48431 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
SOX2P48431 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.69□□□□□ -1.98
SOX2P48431 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
SOX2P48431 RNU6-1309P-201ENST00000363305 108 ntBASIC2.69□□□□□ -1.98
SOX2P48431 RNU6-529P-201ENST00000363383 104 ntBASIC2.69□□□□□ -1.98
SOX2P48431 SNORA51.4-201ENST00000364993 124 ntBASIC2.69□□□□□ -1.98
SOX2P48431 Y_RNA.380-201ENST00000365663 111 ntBASIC2.69□□□□□ -1.98
SOX2P48431 RNU6-541P-201ENST00000384709 110 ntBASIC2.69□□□□□ -1.98
SOX2P48431 RNU6-1105P-201ENST00000384774 107 ntBASIC2.69□□□□□ -1.98
SOX2P48431 MIR490-201ENST00000384865 128 ntBASIC2.69□□□□□ -1.98
SOX2P48431 AC012306.1-201ENST00000423267 114 ntBASIC2.69□□□□□ -1.98
SOX2P48431 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.69□□□□□ -1.98
SOX2P48431 RPS3AP12-201ENST00000443616 753 ntBASIC2.69□□□□□ -1.98
SOX2P48431 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.69□□□□□ -1.98
SOX2P48431 snoU13.14-201ENST00000459372 104 ntBASIC2.69□□□□□ -1.98
SOX2P48431 RPS29P12-201ENST00000460178 152 ntBASIC2.69□□□□□ -1.98
SOX2P48431 AC112771.1-201ENST00000463581 102 ntBASIC2.69□□□□□ -1.98
SOX2P48431 AP004217.1-201ENST00000480579 346 ntBASIC2.69□□□□□ -1.98
SOX2P48431 RN7SL633P-201ENST00000488974 297 ntBASIC2.69□□□□□ -1.98
SOX2P48431 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.69□□□□□ -1.98
SOX2P48431 RNA5SP385-201ENST00000515947 110 ntBASIC2.69□□□□□ -1.98
SOX2P48431 SNORA31.16-201ENST00000516773 139 ntBASIC2.69□□□□□ -1.98
SOX2P48431 MIR2355-201ENST00000517199 87 ntBASIC2.69□□□□□ -1.98
SOX2P48431 AC087664.2-201ENST00000522898 551 ntTSL 4 BASIC2.69□□□□□ -1.98
SOX2P48431 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC2.69□□□□□ -1.98
SOX2P48431 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC2.69□□□□□ -1.98
SOX2P48431 AC090617.3-201ENST00000573670 475 ntBASIC2.69□□□□□ -1.98
SOX2P48431 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.69□□□□□ -1.98
SOX2P48431 MIR4506-201ENST00000584693 77 ntBASIC2.69□□□□□ -1.98
SOX2P48431 AC006130.2-201ENST00000586202 326 ntBASIC2.69□□□□□ -1.98
SOX2P48431 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.69□□□□□ -1.98
SOX2P48431 RPS29P30-201ENST00000600975 111 ntBASIC2.69□□□□□ -1.98
SOX2P48431 AC073410.2-201ENST00000603240 332 ntBASIC2.69□□□□□ -1.98
SOX2P48431 MESTIT1_1.1-201ENST00000618871 140 ntBASIC2.69□□□□□ -1.98
SOX2P48431 AC002064.3-201ENST00000623448 346 ntBASIC2.69□□□□□ -1.98
SOX2P48431 SNORD98-201ENST00000636377 67 ntBASIC2.69□□□□□ -1.98
SOX2P48431 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC2.69□□□□□ -1.98
SOX2P48431 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC2.68□□□□□ -1.98
SOX2P48431 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
SOX2P48431 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.68□□□□□ -1.98
SOX2P48431 RNU6-1083P-201ENST00000384022 107 ntBASIC2.68□□□□□ -1.98
SOX2P48431 Y_RNA.557-201ENST00000384680 107 ntBASIC2.68□□□□□ -1.98
SOX2P48431 MIR186-201ENST00000384988 86 ntBASIC2.68□□□□□ -1.98
SOX2P48431 SNORD67-201ENST00000390833 111 ntBASIC2.68□□□□□ -1.98
SOX2P48431 U3.26-201ENST00000391236 204 ntBASIC2.68□□□□□ -1.98
SOX2P48431 MIR887-201ENST00000401258 79 ntBASIC2.68□□□□□ -1.98
SOX2P48431 MIR1289-1-201ENST00000408836 144 ntBASIC2.68□□□□□ -1.98
SOX2P48431 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC2.68□□□□□ -1.98
SOX2P48431 DPH3P2-201ENST00000422618 250 ntBASIC2.68□□□□□ -1.98
SOX2P48431 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC2.68□□□□□ -1.98
SOX2P48431 USP9YP16-201ENST00000430287 407 ntBASIC2.68□□□□□ -1.98
SOX2P48431 AL133547.1-201ENST00000448546 220 ntBASIC2.68□□□□□ -1.98
SOX2P48431 USP9YP23-201ENST00000455085 407 ntBASIC2.68□□□□□ -1.98
SOX2P48431 AC074250.1-201ENST00000511117 192 ntBASIC2.68□□□□□ -1.98
SOX2P48431 MRPS36P2-201ENST00000512569 299 ntBASIC2.68□□□□□ -1.98
SOX2P48431 RNU5F-2P-201ENST00000516066 82 ntBASIC2.68□□□□□ -1.98
SOX2P48431 AC026403.1-201ENST00000518938 295 ntBASIC2.68□□□□□ -1.98
SOX2P48431 AC079598.5-201ENST00000547460 117 ntBASIC2.68□□□□□ -1.98
SOX2P48431 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.68□□□□□ -1.98
SOX2P48431 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC2.68□□□□□ -1.98
SOX2P48431 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC2.68□□□□□ -1.98
SOX2P48431 AL138963.2-201ENST00000605137 226 ntBASIC2.68□□□□□ -1.98
SOX2P48431 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.68□□□□□ -1.98
SOX2P48431 AC012442.3-202ENST00000636742 206 ntBASIC2.68□□□□□ -1.98
SOX2P48431 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.68□□□□□ -1.98
SOX2P48431 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.68□□□□□ -1.98
SOX2P48431 AL359854.1-201ENST00000614203 1594 ntBASIC2.68□□□□□ -1.98
SOX2P48431 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC2.68□□□□□ -1.98
SOX2P48431 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.68□□□□□ -1.98
SOX2P48431 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SOX2P48431 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC2.68□□□□□ -1.98
SOX2P48431 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SOX2P48431 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.67□□□□□ -1.98
SOX2P48431 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
SOX2P48431 Y_RNA.133-201ENST00000363428 110 ntBASIC2.67□□□□□ -1.98
SOX2P48431 Y_RNA.152-201ENST00000363578 100 ntBASIC2.67□□□□□ -1.98
SOX2P48431 Y_RNA.153-201ENST00000363615 91 ntBASIC2.67□□□□□ -1.98
SOX2P48431 RNU4-50P-201ENST00000364361 141 ntBASIC2.67□□□□□ -1.98
SOX2P48431 Y_RNA.319-201ENST00000365138 92 ntBASIC2.67□□□□□ -1.98
SOX2P48431 SNORA63.7-201ENST00000365579 123 ntBASIC2.67□□□□□ -1.98
SOX2P48431 SNORA51.11-201ENST00000384442 131 ntBASIC2.67□□□□□ -1.98
SOX2P48431 RNU1-57P-201ENST00000384491 166 ntBASIC2.67□□□□□ -1.98
SOX2P48431 UBA52P6-201ENST00000399822 382 ntBASIC2.67□□□□□ -1.98
SOX2P48431 MIR1252-201ENST00000408861 65 ntBASIC2.67□□□□□ -1.98
SOX2P48431 HMGB3P2-201ENST00000411913 584 ntBASIC2.67□□□□□ -1.98
SOX2P48431 AC091286.1-201ENST00000431233 461 ntBASIC2.67□□□□□ -1.98
SOX2P48431 Z98742.2-201ENST00000431564 187 ntBASIC2.67□□□□□ -1.98
SOX2P48431 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC2.67□□□□□ -1.98
SOX2P48431 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC2.67□□□□□ -1.98
SOX2P48431 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.67□□□□□ -1.98
SOX2P48431 snoU13.6-201ENST00000458785 104 ntBASIC2.67□□□□□ -1.98
SOX2P48431 U8.20-201ENST00000459445 131 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 136.8 ms