Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 SNORD116-3-201ENST00000384287 95 ntBASIC2□□□□□ -2.09
CTNNA1P35221 SNORD116-7-201ENST00000384404 95 ntBASIC2□□□□□ -2.09
CTNNA1P35221 SNORD116-5-201ENST00000384462 95 ntBASIC2□□□□□ -2.09
CTNNA1P35221 RNU6-1106P-201ENST00000390845 107 ntBASIC2□□□□□ -2.09
CTNNA1P35221 RN7SKP223-201ENST00000410582 62 ntBASIC2□□□□□ -2.09
CTNNA1P35221 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2□□□□□ -2.09
CTNNA1P35221 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC2□□□□□ -2.09
CTNNA1P35221 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2□□□□□ -2.09
CTNNA1P35221 AC002486.1-201ENST00000435098 391 ntBASIC2□□□□□ -2.09
CTNNA1P35221 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2□□□□□ -2.09
CTNNA1P35221 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC2□□□□□ -2.09
CTNNA1P35221 UBE2DNL-203ENST00000474922 222 ntBASIC2□□□□□ -2.09
CTNNA1P35221 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2□□□□□ -2.09
CTNNA1P35221 AC091874.1-201ENST00000511402 339 ntBASIC2□□□□□ -2.09
CTNNA1P35221 RN7SKP298-201ENST00000515950 94 ntBASIC2□□□□□ -2.09
CTNNA1P35221 RNU4ATAC8P-201ENST00000516196 109 ntBASIC2□□□□□ -2.09
CTNNA1P35221 MTND4P7-201ENST00000523876 130 ntBASIC2□□□□□ -2.09
CTNNA1P35221 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC2□□□□□ -2.09
CTNNA1P35221 AC090115.3-201ENST00000553218 849 ntBASIC2□□□□□ -2.09
CTNNA1P35221 AC021231.3-201ENST00000558497 370 ntBASIC2□□□□□ -2.09
CTNNA1P35221 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC2□□□□□ -2.09
CTNNA1P35221 AL391646.1-201ENST00000603860 190 ntBASIC2□□□□□ -2.09
CTNNA1P35221 Z98751.3-201ENST00000604447 521 ntBASIC2□□□□□ -2.09
CTNNA1P35221 SKIL-202ENST00000413427 2702 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CTNNA1P35221 AC092881.1-201ENST00000638218 2733 ntBASIC1.99□□□□□ -2.09
CTNNA1P35221 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.99□□□□□ -2.09
CTNNA1P35221 ZNF644-212ENST00000621077 2056 ntTSL 5 BASIC1.99□□□□□ -2.09
CTNNA1P35221 RNU6-1103P-201ENST00000384150 107 ntBASIC1.99□□□□□ -2.09
CTNNA1P35221 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
CTNNA1P35221 AL606923.1-201ENST00000406616 190 ntBASIC1.99□□□□□ -2.09
CTNNA1P35221 SNORA3.2-201ENST00000408221 125 ntBASIC1.99□□□□□ -2.09
CTNNA1P35221 RNA5SP508-201ENST00000411327 119 ntBASIC1.99□□□□□ -2.09
CTNNA1P35221 CDK8P2-201ENST00000415020 547 ntBASIC1.99□□□□□ -2.09
CTNNA1P35221 Z98742.3-201ENST00000418637 326 ntBASIC1.99□□□□□ -2.09
CTNNA1P35221 AC123900.1-201ENST00000420390 96 ntBASIC1.99□□□□□ -2.09
CTNNA1P35221 AL162725.2-201ENST00000430545 748 ntTSL 5 BASIC1.99□□□□□ -2.09
CTNNA1P35221 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
CTNNA1P35221 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC1.99□□□□□ -2.09
CTNNA1P35221 MTCO1P19-201ENST00000443487 500 ntBASIC1.99□□□□□ -2.09
CTNNA1P35221 RNU1-131P-201ENST00000458943 161 ntBASIC1.99□□□□□ -2.09
CTNNA1P35221 RNU7-138P-201ENST00000459479 64 ntBASIC1.99□□□□□ -2.09
CTNNA1P35221 AC087884.1-201ENST00000469738 328 ntBASIC1.99□□□□□ -2.09
CTNNA1P35221 RPS3AP17-201ENST00000472594 777 ntBASIC1.99□□□□□ -2.09
CTNNA1P35221 AC010486.1-201ENST00000511793 424 ntBASIC1.99□□□□□ -2.09
CTNNA1P35221 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC1.99□□□□□ -2.09
CTNNA1P35221 AC087441.2-201ENST00000529141 262 ntBASIC1.99□□□□□ -2.09
CTNNA1P35221 AC005786.1-201ENST00000588553 154 ntBASIC1.99□□□□□ -2.09
CTNNA1P35221 AC245008.1-201ENST00000608123 476 ntBASIC1.99□□□□□ -2.09
CTNNA1P35221 PCGEM1.1-201ENST00000613431 131 ntBASIC1.99□□□□□ -2.09
CTNNA1P35221 AC090582.1-201ENST00000636321 199 ntBASIC1.99□□□□□ -2.09
CTNNA1P35221 ANKRD36-208ENST00000639751 3090 ntTSL 5 BASIC1.98□□□□□ -2.09
CTNNA1P35221 AL356292.1-201ENST00000283110 373 ntBASIC1.98□□□□□ -2.09
CTNNA1P35221 Y_RNA.296-201ENST00000364930 108 ntBASIC1.98□□□□□ -2.09
CTNNA1P35221 RNU6-438P-201ENST00000365561 103 ntBASIC1.98□□□□□ -2.09
CTNNA1P35221 RNA5SP219-201ENST00000390940 113 ntBASIC1.98□□□□□ -2.09
CTNNA1P35221 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.98□□□□□ -2.09
CTNNA1P35221 RNA5SP425-201ENST00000410336 112 ntBASIC1.98□□□□□ -2.09
CTNNA1P35221 RNU2-20P-201ENST00000410425 191 ntBASIC1.98□□□□□ -2.09
CTNNA1P35221 RNA5SP100-201ENST00000410903 110 ntBASIC1.98□□□□□ -2.09
CTNNA1P35221 RNA5SP59-201ENST00000410922 110 ntBASIC1.98□□□□□ -2.09
CTNNA1P35221 AP000275.1-201ENST00000411943 390 ntBASIC1.98□□□□□ -2.09
CTNNA1P35221 EIF1AXP1-201ENST00000419267 435 ntBASIC1.98□□□□□ -2.09
CTNNA1P35221 NCOR1P3-201ENST00000420479 303 ntBASIC1.98□□□□□ -2.09
CTNNA1P35221 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC1.98□□□□□ -2.09
CTNNA1P35221 MTCO2P19-201ENST00000427513 598 ntBASIC1.98□□□□□ -2.09
CTNNA1P35221 MTCO2P16-201ENST00000436962 677 ntBASIC1.98□□□□□ -2.09
CTNNA1P35221 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.98□□□□□ -2.09
CTNNA1P35221 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.98□□□□□ -2.09
CTNNA1P35221 AC130509.1-201ENST00000464158 433 ntBASIC1.98□□□□□ -2.09
CTNNA1P35221 AL163973.1-201ENST00000484753 577 ntBASIC1.98□□□□□ -2.09
CTNNA1P35221 AC079140.3-201ENST00000511111 550 ntBASIC1.98□□□□□ -2.09
CTNNA1P35221 AC008834.1-201ENST00000511612 175 ntBASIC1.98□□□□□ -2.09
CTNNA1P35221 5S_rRNA.3-201ENST00000517021 110 ntBASIC1.98□□□□□ -2.09
CTNNA1P35221 SNORA44.1-201ENST00000517031 108 ntBASIC1.98□□□□□ -2.09
CTNNA1P35221 AP002770.2-201ENST00000543613 532 ntBASIC1.98□□□□□ -2.09
CTNNA1P35221 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.98□□□□□ -2.09
CTNNA1P35221 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.98□□□□□ -2.09
CTNNA1P35221 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC1.98□□□□□ -2.09
CTNNA1P35221 CYP4A27P-201ENST00000567218 190 ntBASIC1.98□□□□□ -2.09
CTNNA1P35221 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.98□□□□□ -2.09
CTNNA1P35221 MIR3198-2-201ENST00000577868 80 ntBASIC1.98□□□□□ -2.09
CTNNA1P35221 AC116312.1-201ENST00000606841 314 ntBASIC1.98□□□□□ -2.09
CTNNA1P35221 5S_rRNA.19-201ENST00000612131 110 ntBASIC1.98□□□□□ -2.09
CTNNA1P35221 AL354950.2-201ENST00000617939 290 ntBASIC1.98□□□□□ -2.09
CTNNA1P35221 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.98□□□□□ -2.09
CTNNA1P35221 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC1.98□□□□□ -2.09
CTNNA1P35221 SNORA32.2-201ENST00000384049 122 ntBASIC1.97□□□□□ -2.09
CTNNA1P35221 AL030996.1-201ENST00000411430 235 ntBASIC1.97□□□□□ -2.09
CTNNA1P35221 RPL31P63-201ENST00000422565 375 ntBASIC1.97□□□□□ -2.09
CTNNA1P35221 Z83846.1-201ENST00000446798 265 ntBASIC1.97□□□□□ -2.09
CTNNA1P35221 AL353705.4-201ENST00000449661 238 ntBASIC1.97□□□□□ -2.09
CTNNA1P35221 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC1.97□□□□□ -2.09
CTNNA1P35221 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC1.97□□□□□ -2.09
CTNNA1P35221 MTCO2P18-201ENST00000457151 658 ntBASIC1.97□□□□□ -2.09
CTNNA1P35221 AL354733.1-201ENST00000458016 476 ntTSL 3 BASIC1.97□□□□□ -2.09
CTNNA1P35221 HMGB1P29-201ENST00000505659 499 ntBASIC1.97□□□□□ -2.09
CTNNA1P35221 ATP5EP1-201ENST00000510257 156 ntBASIC1.97□□□□□ -2.09
CTNNA1P35221 AC091133.4-201ENST00000511142 308 ntBASIC1.97□□□□□ -2.09
CTNNA1P35221 AC008549.1-201ENST00000512900 643 ntBASIC1.97□□□□□ -2.09
CTNNA1P35221 AC007991.3-201ENST00000517623 502 ntTSL 4 BASIC1.97□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms