Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.33□□□□□ -1.88
XPAP23025 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.33□□□□□ -1.88
XPAP23025 AC007375.1-201ENST00000554513 578 ntBASIC3.33□□□□□ -1.88
XPAP23025 RPS29P30-201ENST00000600975 111 ntBASIC3.33□□□□□ -1.88
XPAP23025 AL390123.1-201ENST00000603216 237 ntBASIC3.33□□□□□ -1.88
XPAP23025 AC073657.2-201ENST00000605661 303 ntBASIC3.33□□□□□ -1.88
XPAP23025 uc_338.1-201ENST00000612113 180 ntBASIC3.33□□□□□ -1.88
XPAP23025 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
XPAP23025 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
XPAP23025 OFD1P6Y-202ENST00000451061 2724 ntBASIC3.33□□□□□ -1.88
XPAP23025 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.33□□□□□ -1.88
XPAP23025 Y_RNA.105-201ENST00000363182 111 ntBASIC3.32□□□□□ -1.88
XPAP23025 RNU6-1285P-201ENST00000363480 105 ntBASIC3.32□□□□□ -1.88
XPAP23025 Y_RNA.152-201ENST00000363578 100 ntBASIC3.32□□□□□ -1.88
XPAP23025 RNU4-50P-201ENST00000364361 141 ntBASIC3.32□□□□□ -1.88
XPAP23025 RNU6-1222P-201ENST00000384615 107 ntBASIC3.32□□□□□ -1.88
XPAP23025 RNU6-19P-201ENST00000384718 107 ntBASIC3.32□□□□□ -1.88
XPAP23025 AL365496.1-201ENST00000426885 215 ntBASIC3.32□□□□□ -1.88
XPAP23025 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.32□□□□□ -1.88
XPAP23025 FCF1P4-201ENST00000448326 183 ntBASIC3.32□□□□□ -1.88
XPAP23025 PCNPP5-201ENST00000452246 481 ntBASIC3.32□□□□□ -1.88
XPAP23025 snoU13.6-201ENST00000458785 104 ntBASIC3.32□□□□□ -1.88
XPAP23025 AL442163.3-201ENST00000554110 156 ntBASIC3.32□□□□□ -1.88
XPAP23025 MIR5571-201ENST00000577998 113 ntBASIC3.32□□□□□ -1.88
XPAP23025 MIR5195-201ENST00000583555 115 ntBASIC3.32□□□□□ -1.88
XPAP23025 AL137843.1-201ENST00000605078 385 ntBASIC3.32□□□□□ -1.88
XPAP23025 AL356157.2-201ENST00000605122 111 ntBASIC3.32□□□□□ -1.88
XPAP23025 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.32□□□□□ -1.88
XPAP23025 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.32□□□□□ -1.88
XPAP23025 AC058791.1-201ENST00000608412 3198 ntBASIC3.32□□□□□ -1.88
XPAP23025 THNSL1-201ENST00000376356 3691 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
XPAP23025 PTBP2-211ENST00000609116 12014 ntAPPRIS ALT1 TSL 1 (best) BASIC3.32□□□□□ -1.88
XPAP23025 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
XPAP23025 ROCK2-203ENST00000401753 4017 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
XPAP23025 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
XPAP23025 HAUS6P2-201ENST00000433254 2404 ntBASIC3.31□□□□□ -1.88
XPAP23025 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
XPAP23025 U3.13-201ENST00000364804 214 ntBASIC3.31□□□□□ -1.88
XPAP23025 SNORA63.7-201ENST00000365579 123 ntBASIC3.31□□□□□ -1.88
XPAP23025 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
XPAP23025 Y_RNA.401-201ENST00000383965 117 ntBASIC3.31□□□□□ -1.88
XPAP23025 RNU6-472P-201ENST00000384299 107 ntBASIC3.31□□□□□ -1.88
XPAP23025 MIR184-201ENST00000384962 84 ntBASIC3.31□□□□□ -1.88
XPAP23025 RNA5SP390-201ENST00000410191 113 ntBASIC3.31□□□□□ -1.88
XPAP23025 RN7SKP61-201ENST00000410642 295 ntBASIC3.31□□□□□ -1.88
XPAP23025 AL445305.1-201ENST00000432577 575 ntBASIC3.31□□□□□ -1.88
XPAP23025 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.31□□□□□ -1.88
XPAP23025 AP000705.1-201ENST00000454567 350 ntBASIC3.31□□□□□ -1.88
XPAP23025 AP000870.1-201ENST00000472927 406 ntBASIC3.31□□□□□ -1.88
XPAP23025 RPS27P26-201ENST00000494583 239 ntBASIC3.31□□□□□ -1.88
XPAP23025 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC3.31□□□□□ -1.88
XPAP23025 RNY3P15-201ENST00000516297 97 ntBASIC3.31□□□□□ -1.88
XPAP23025 SNORA31.16-201ENST00000516773 139 ntBASIC3.31□□□□□ -1.88
XPAP23025 AC034114.1-201ENST00000520293 285 ntBASIC3.31□□□□□ -1.88
XPAP23025 AP002770.2-201ENST00000543613 532 ntBASIC3.31□□□□□ -1.88
XPAP23025 AC110588.1-201ENST00000559699 137 ntBASIC3.31□□□□□ -1.88
XPAP23025 AC090617.3-201ENST00000573670 475 ntBASIC3.31□□□□□ -1.88
XPAP23025 MIR5680-201ENST00000577577 84 ntBASIC3.31□□□□□ -1.88
XPAP23025 AL078605.1-201ENST00000603529 500 ntBASIC3.31□□□□□ -1.88
XPAP23025 AL359198.2-201ENST00000611836 194 ntBASIC3.31□□□□□ -1.88
XPAP23025 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.31□□□□□ -1.88
XPAP23025 MIR8062-201ENST00000621515 85 ntBASIC3.31□□□□□ -1.88
XPAP23025 NAA50-211ENST00000630058 177 ntTSL 5 BASIC3.31□□□□□ -1.88
XPAP23025 U6.92-201ENST00000636464 89 ntBASIC3.31□□□□□ -1.88
XPAP23025 AC009487.2-201ENST00000420969 6821 ntBASIC3.31□□□□□ -1.88
XPAP23025 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
XPAP23025 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.31□□□□□ -1.88
XPAP23025 AL356274.2-201ENST00000624379 3752 ntBASIC3.31□□□□□ -1.88
XPAP23025 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.31□□□□□ -1.88
XPAP23025 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
XPAP23025 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
XPAP23025 Y_RNA.27-201ENST00000362540 103 ntBASIC3.3□□□□□ -1.88
XPAP23025 SNORD115-32-201ENST00000364079 82 ntBASIC3.3□□□□□ -1.88
XPAP23025 RNU6-487P-201ENST00000365430 104 ntBASIC3.3□□□□□ -1.88
XPAP23025 RNU6-142P-201ENST00000384019 107 ntBASIC3.3□□□□□ -1.88
XPAP23025 Y_RNA.458-201ENST00000384240 102 ntBASIC3.3□□□□□ -1.88
XPAP23025 U8.10-201ENST00000384260 133 ntBASIC3.3□□□□□ -1.88
XPAP23025 Y_RNA.526-201ENST00000384572 110 ntBASIC3.3□□□□□ -1.88
XPAP23025 RNU6-750P-201ENST00000390946 107 ntBASIC3.3□□□□□ -1.88
XPAP23025 AL353705.1-201ENST00000433468 480 ntBASIC3.3□□□□□ -1.88
XPAP23025 AC244670.1-201ENST00000436879 112 ntBASIC3.3□□□□□ -1.88
XPAP23025 RN7SKP282-201ENST00000516824 299 ntBASIC3.3□□□□□ -1.88
XPAP23025 SNORD19.2-201ENST00000516978 73 ntBASIC3.3□□□□□ -1.88
XPAP23025 AC022868.1-201ENST00000517767 391 ntBASIC3.3□□□□□ -1.88
XPAP23025 AP005436.2-201ENST00000528458 252 ntTSL 5 BASIC3.3□□□□□ -1.88
XPAP23025 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.3□□□□□ -1.88
XPAP23025 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.3□□□□□ -1.88
XPAP23025 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.3□□□□□ -1.88
XPAP23025 AC125232.2-201ENST00000592457 143 ntBASIC3.3□□□□□ -1.88
XPAP23025 AC008739.2-201ENST00000597006 317 ntBASIC3.3□□□□□ -1.88
XPAP23025 AC004832.5-201ENST00000608677 401 ntBASIC3.3□□□□□ -1.88
XPAP23025 RMST_8.1-201ENST00000610287 165 ntBASIC3.3□□□□□ -1.88
XPAP23025 RMST_6.1-201ENST00000611980 203 ntBASIC3.3□□□□□ -1.88
XPAP23025 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.3□□□□□ -1.88
XPAP23025 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.3□□□□□ -1.88
XPAP23025 AC007792.1-201ENST00000623023 402 ntBASIC3.3□□□□□ -1.88
XPAP23025 AC091903.1-201ENST00000624322 454 ntBASIC3.3□□□□□ -1.88
XPAP23025 AC243829.7-201ENST00000633081 225 ntBASIC3.3□□□□□ -1.88
XPAP23025 AC138915.1-201ENST00000565427 1685 ntBASIC3.3□□□□□ -1.88
XPAP23025 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms