Protein–RNA interactions for Protein: P0CG47

UBB, Polyubiquitin-B, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP0CG47 AC091895.1-201ENST00000624494 256 ntBASIC0.66□□□□□ -2.3
UBBP0CG47 AC233981.2-201ENST00000611524 1614 ntBASIC0.65□□□□□ -2.31
UBBP0CG47 HSBP1P2-201ENST00000299671 229 ntBASIC0.65□□□□□ -2.31
UBBP0CG47 RNU1-76P-201ENST00000362903 159 ntBASIC0.65□□□□□ -2.31
UBBP0CG47 RNU6-1019P-201ENST00000364424 107 ntBASIC0.65□□□□□ -2.31
UBBP0CG47 MIR122-201ENST00000385044 85 ntBASIC0.65□□□□□ -2.31
UBBP0CG47 MTCO1P21-201ENST00000416634 589 ntBASIC0.65□□□□□ -2.31
UBBP0CG47 AL606490.4-201ENST00000423117 127 ntBASIC0.65□□□□□ -2.31
UBBP0CG47 FTH1P12-201ENST00000432137 551 ntBASIC0.65□□□□□ -2.31
UBBP0CG47 MTND5P15-201ENST00000434246 349 ntBASIC0.65□□□□□ -2.31
UBBP0CG47 RPL37P21-201ENST00000435890 276 ntBASIC0.65□□□□□ -2.31
UBBP0CG47 RPS24P1-201ENST00000438550 371 ntBASIC0.65□□□□□ -2.31
UBBP0CG47 AC092473.1-201ENST00000441098 221 ntBASIC0.65□□□□□ -2.31
UBBP0CG47 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.65□□□□□ -2.31
UBBP0CG47 AC010587.1-201ENST00000505809 469 ntBASIC0.65□□□□□ -2.31
UBBP0CG47 AC116347.2-201ENST00000514912 523 ntBASIC0.65□□□□□ -2.31
UBBP0CG47 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.65□□□□□ -2.31
UBBP0CG47 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC0.65□□□□□ -2.31
UBBP0CG47 CBX3P8-201ENST00000532412 525 ntBASIC0.65□□□□□ -2.31
UBBP0CG47 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.65□□□□□ -2.31
UBBP0CG47 SNORA59B-202ENST00000578183 701 ntBASIC0.65□□□□□ -2.31
UBBP0CG47 MIR3136-201ENST00000583498 78 ntBASIC0.65□□□□□ -2.31
UBBP0CG47 AC064872.1-201ENST00000604823 1072 ntBASIC0.65□□□□□ -2.31
UBBP0CG47 AL031775.1-201ENST00000607014 887 ntBASIC0.65□□□□□ -2.31
UBBP0CG47 AL157392.4-201ENST00000609756 345 ntBASIC0.65□□□□□ -2.31
UBBP0CG47 AL353149.1-201ENST00000610667 244 ntBASIC0.65□□□□□ -2.31
UBBP0CG47 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC0.65□□□□□ -2.31
UBBP0CG47 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.65□□□□□ -2.31
UBBP0CG47 AC006927.4-201ENST00000639187 543 ntBASIC0.65□□□□□ -2.31
UBBP0CG47 AC099654.13-201ENST00000639774 207 ntBASIC0.65□□□□□ -2.31
UBBP0CG47 UBE3A-225ENST00000636667 5726 ntTSL 5 BASIC0.65□□□□□ -2.31
UBBP0CG47 AC008163.1-202ENST00000636004 2889 ntBASIC0.64□□□□□ -2.31
UBBP0CG47 RNU6-1141P-201ENST00000364520 107 ntBASIC0.64□□□□□ -2.31
UBBP0CG47 RNU6-336P-201ENST00000364891 107 ntBASIC0.64□□□□□ -2.31
UBBP0CG47 SNORD31B-201ENST00000364977 69 ntBASIC0.64□□□□□ -2.31
UBBP0CG47 RNU6-53P-201ENST00000365367 106 ntBASIC0.64□□□□□ -2.31
UBBP0CG47 RNU6-1080P-201ENST00000383982 107 ntBASIC0.64□□□□□ -2.31
UBBP0CG47 SNORA25-201ENST00000384384 134 ntBASIC0.64□□□□□ -2.31
UBBP0CG47 RNU6-1065P-201ENST00000384513 106 ntBASIC0.64□□□□□ -2.31
UBBP0CG47 RNU6-482P-201ENST00000391068 107 ntBASIC0.64□□□□□ -2.31
UBBP0CG47 RNU2-39P-201ENST00000410604 198 ntBASIC0.64□□□□□ -2.31
UBBP0CG47 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.64□□□□□ -2.31
UBBP0CG47 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC0.64□□□□□ -2.31
UBBP0CG47 RPL23AP95-201ENST00000426806 265 ntBASIC0.64□□□□□ -2.31
UBBP0CG47 AL591043.1-201ENST00000432461 424 ntBASIC0.64□□□□□ -2.31
UBBP0CG47 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC0.64□□□□□ -2.31
UBBP0CG47 ATP5J2P3-201ENST00000451550 258 ntBASIC0.64□□□□□ -2.31
UBBP0CG47 RNA5SP269-201ENST00000459032 137 ntBASIC0.64□□□□□ -2.31
UBBP0CG47 AC112204.1-201ENST00000502591 103 ntBASIC0.64□□□□□ -2.31
UBBP0CG47 AC079140.3-201ENST00000511111 550 ntBASIC0.64□□□□□ -2.31
UBBP0CG47 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC0.64□□□□□ -2.31
UBBP0CG47 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC0.64□□□□□ -2.31
UBBP0CG47 RNU5A-4P-201ENST00000516588 111 ntBASIC0.64□□□□□ -2.31
UBBP0CG47 RNU6-1098P-201ENST00000516772 96 ntBASIC0.64□□□□□ -2.31
UBBP0CG47 RNA5SP481-201ENST00000516814 122 ntBASIC0.64□□□□□ -2.31
UBBP0CG47 RNU6-856P-201ENST00000516959 98 ntBASIC0.64□□□□□ -2.31
UBBP0CG47 RNU6-1220P-201ENST00000517126 108 ntBASIC0.64□□□□□ -2.31
UBBP0CG47 RNU6-165P-201ENST00000517170 99 ntBASIC0.64□□□□□ -2.31
UBBP0CG47 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC0.64□□□□□ -2.31
UBBP0CG47 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC0.64□□□□□ -2.31
UBBP0CG47 AC087883.1-201ENST00000551882 391 ntBASIC0.64□□□□□ -2.31
UBBP0CG47 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC0.64□□□□□ -2.31
UBBP0CG47 HMGB1P33-201ENST00000563485 527 ntBASIC0.64□□□□□ -2.31
UBBP0CG47 AL022345.2-201ENST00000606307 135 ntBASIC0.64□□□□□ -2.31
UBBP0CG47 BX284668.6-201ENST00000606899 438 ntBASIC0.64□□□□□ -2.31
UBBP0CG47 AC018645.2-201ENST00000609151 472 ntBASIC0.64□□□□□ -2.31
UBBP0CG47 AC138749.5-201ENST00000611461 208 ntBASIC0.64□□□□□ -2.31
UBBP0CG47 AC116165.2-201ENST00000616705 206 ntBASIC0.64□□□□□ -2.31
UBBP0CG47 AL031667.3-201ENST00000620124 655 ntBASIC0.64□□□□□ -2.31
UBBP0CG47 AC019226.2-201ENST00000625973 424 ntBASIC0.64□□□□□ -2.31
UBBP0CG47 SENP7-201ENST00000314261 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC0.64□□□□□ -2.31
UBBP0CG47 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC0.64□□□□□ -2.31
UBBP0CG47 SNORA4.2-201ENST00000365313 147 ntBASIC0.63□□□□□ -2.31
UBBP0CG47 TRAJ3-201ENST00000390534 62 ntAPPRIS P1 BASIC0.63□□□□□ -2.31
UBBP0CG47 Y_RNA.608-201ENST00000410647 95 ntBASIC0.63□□□□□ -2.31
UBBP0CG47 RNU2-64P-201ENST00000411315 191 ntBASIC0.63□□□□□ -2.31
UBBP0CG47 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC0.63□□□□□ -2.31
UBBP0CG47 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC0.63□□□□□ -2.31
UBBP0CG47 AC010975.2-201ENST00000427781 588 ntBASIC0.63□□□□□ -2.31
UBBP0CG47 USP9YP14-201ENST00000430663 563 ntBASIC0.63□□□□□ -2.31
UBBP0CG47 SNAP23P1-201ENST00000433229 246 ntBASIC0.63□□□□□ -2.31
UBBP0CG47 GTF2IP13-201ENST00000438487 386 ntBASIC0.63□□□□□ -2.31
UBBP0CG47 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC0.63□□□□□ -2.31
UBBP0CG47 AL138808.1-201ENST00000441428 371 ntTSL 2 BASIC0.63□□□□□ -2.31
UBBP0CG47 LINC01073-201ENST00000441659 149 ntTSL 3 BASIC0.63□□□□□ -2.31
UBBP0CG47 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC0.63□□□□□ -2.31
UBBP0CG47 snoU13.27-201ENST00000459278 104 ntBASIC0.63□□□□□ -2.31
UBBP0CG47 ARL2BPP4-201ENST00000506854 471 ntBASIC0.63□□□□□ -2.31
UBBP0CG47 AC112206.4-201ENST00000515142 405 ntBASIC0.63□□□□□ -2.31
UBBP0CG47 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.63□□□□□ -2.31
UBBP0CG47 ZNF321P-202ENST00000550843 495 ntBASIC0.63□□□□□ -2.31
UBBP0CG47 AL442163.3-201ENST00000554110 156 ntBASIC0.63□□□□□ -2.31
UBBP0CG47 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC0.63□□□□□ -2.31
UBBP0CG47 AC090888.2-201ENST00000559765 1144 ntBASIC0.63□□□□□ -2.31
UBBP0CG47 MIR3664-201ENST00000579074 99 ntBASIC0.63□□□□□ -2.31
UBBP0CG47 BNIP3P16-201ENST00000589779 534 ntBASIC0.63□□□□□ -2.31
UBBP0CG47 VN1R107P-201ENST00000601784 209 ntBASIC0.63□□□□□ -2.31
UBBP0CG47 AC078795.3-201ENST00000602913 472 ntBASIC0.63□□□□□ -2.31
UBBP0CG47 AL121992.2-201ENST00000606262 256 ntBASIC0.63□□□□□ -2.31
UBBP0CG47 AC108706.1-201ENST00000611053 297 ntBASIC0.63□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms