Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.75□□□□□ -1.97
MMP3P08254 AC074117.2-201ENST00000417130 397 ntBASIC2.75□□□□□ -1.97
MMP3P08254 BX276092.3-201ENST00000424182 230 ntBASIC2.75□□□□□ -1.97
MMP3P08254 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.75□□□□□ -1.97
MMP3P08254 AC004383.1-201ENST00000438135 289 ntBASIC2.75□□□□□ -1.97
MMP3P08254 AC243964.1-201ENST00000441814 261 ntBASIC2.75□□□□□ -1.97
MMP3P08254 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.75□□□□□ -1.97
MMP3P08254 AC006026.2-201ENST00000457376 180 ntBASIC2.75□□□□□ -1.97
MMP3P08254 U8.21-201ENST00000459536 136 ntBASIC2.75□□□□□ -1.97
MMP3P08254 RPS29P12-201ENST00000460178 152 ntBASIC2.75□□□□□ -1.97
MMP3P08254 RPS29P27-201ENST00000463711 170 ntBASIC2.75□□□□□ -1.97
MMP3P08254 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.75□□□□□ -1.97
MMP3P08254 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.75□□□□□ -1.97
MMP3P08254 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
MMP3P08254 AC025281.1-201ENST00000567026 265 ntBASIC2.75□□□□□ -1.97
MMP3P08254 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.75□□□□□ -1.97
MMP3P08254 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.75□□□□□ -1.97
MMP3P08254 AL158827.2-201ENST00000602494 330 ntBASIC2.75□□□□□ -1.97
MMP3P08254 AL353621.2-201ENST00000605340 133 ntBASIC2.75□□□□□ -1.97
MMP3P08254 AL691447.3-201ENST00000635020 330 ntBASIC2.75□□□□□ -1.97
MMP3P08254 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.75□□□□□ -1.97
MMP3P08254 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.75□□□□□ -1.97
MMP3P08254 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC2.75□□□□□ -1.97
MMP3P08254 SAGE1-201ENST00000324447 2952 ntAPPRIS P2 TSL 5 BASIC2.74□□□□□ -1.97
MMP3P08254 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
MMP3P08254 ZNF736P3Y-201ENST00000428264 1465 ntBASIC2.74□□□□□ -1.97
MMP3P08254 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
MMP3P08254 RNA5SP456-201ENST00000364002 114 ntBASIC2.74□□□□□ -1.97
MMP3P08254 RNU4-76P-201ENST00000364509 141 ntBASIC2.74□□□□□ -1.97
MMP3P08254 U8.8-201ENST00000365399 135 ntBASIC2.74□□□□□ -1.97
MMP3P08254 MIR147B-201ENST00000390185 80 ntBASIC2.74□□□□□ -1.97
MMP3P08254 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
MMP3P08254 RNU6-750P-201ENST00000390946 107 ntBASIC2.74□□□□□ -1.97
MMP3P08254 RNA5SP492-201ENST00000411330 114 ntBASIC2.74□□□□□ -1.97
MMP3P08254 AL353997.1-201ENST00000432936 108 ntBASIC2.74□□□□□ -1.97
MMP3P08254 DAP3P1-201ENST00000441522 278 ntBASIC2.74□□□□□ -1.97
MMP3P08254 AC009296.1-201ENST00000443146 155 ntBASIC2.74□□□□□ -1.97
MMP3P08254 AC104389.3-201ENST00000445629 235 ntBASIC2.74□□□□□ -1.97
MMP3P08254 Z96811.1-201ENST00000445880 108 ntBASIC2.74□□□□□ -1.97
MMP3P08254 AP001025.1-201ENST00000486139 332 ntBASIC2.74□□□□□ -1.97
MMP3P08254 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.74□□□□□ -1.97
MMP3P08254 SNORA25.11-201ENST00000515935 105 ntBASIC2.74□□□□□ -1.97
MMP3P08254 RNU5F-8P-201ENST00000515941 111 ntBASIC2.74□□□□□ -1.97
MMP3P08254 ACA59.1-201ENST00000515966 143 ntBASIC2.74□□□□□ -1.97
MMP3P08254 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC2.74□□□□□ -1.97
MMP3P08254 HSPE1P20-201ENST00000538133 289 ntBASIC2.74□□□□□ -1.97
MMP3P08254 AC019159.1-201ENST00000605094 187 ntBASIC2.74□□□□□ -1.97
MMP3P08254 AC103810.6-201ENST00000606708 136 ntBASIC2.74□□□□□ -1.97
MMP3P08254 HMGB1P24-202ENST00000615653 685 ntBASIC2.74□□□□□ -1.97
MMP3P08254 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.74□□□□□ -1.97
MMP3P08254 AC099654.10-201ENST00000640395 161 ntBASIC2.74□□□□□ -1.97
MMP3P08254 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.74□□□□□ -1.97
MMP3P08254 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.74□□□□□ -1.97
MMP3P08254 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
MMP3P08254 Y_RNA.123-201ENST00000363338 102 ntBASIC2.73□□□□□ -1.97
MMP3P08254 RNA5SP139-201ENST00000364340 117 ntBASIC2.73□□□□□ -1.97
MMP3P08254 Y_RNA.431-201ENST00000384086 102 ntBASIC2.73□□□□□ -1.97
MMP3P08254 MIR544A-201ENST00000384855 91 ntBASIC2.73□□□□□ -1.97
MMP3P08254 RNU6-308P-201ENST00000390957 107 ntBASIC2.73□□□□□ -1.97
MMP3P08254 RNA5SP354-201ENST00000391247 136 ntBASIC2.73□□□□□ -1.97
MMP3P08254 RNA5SP425-201ENST00000410336 112 ntBASIC2.73□□□□□ -1.97
MMP3P08254 RPL23AP50-201ENST00000434149 455 ntBASIC2.73□□□□□ -1.97
MMP3P08254 AL031659.1-201ENST00000447075 539 ntBASIC2.73□□□□□ -1.97
MMP3P08254 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.73□□□□□ -1.97
MMP3P08254 AC012308.1-201ENST00000451232 178 ntBASIC2.73□□□□□ -1.97
MMP3P08254 ELOCP24-201ENST00000456370 334 ntBASIC2.73□□□□□ -1.97
MMP3P08254 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.73□□□□□ -1.97
MMP3P08254 AP001324.2-201ENST00000461163 319 ntBASIC2.73□□□□□ -1.97
MMP3P08254 AC133134.1-201ENST00000466800 359 ntBASIC2.73□□□□□ -1.97
MMP3P08254 AC107626.1-201ENST00000471084 183 ntBASIC2.73□□□□□ -1.97
MMP3P08254 RPL30P12-201ENST00000474666 353 ntBASIC2.73□□□□□ -1.97
MMP3P08254 GZMAP1-201ENST00000503054 631 ntBASIC2.73□□□□□ -1.97
MMP3P08254 AC097473.1-201ENST00000508142 408 ntBASIC2.73□□□□□ -1.97
MMP3P08254 MRPS36P2-201ENST00000512569 299 ntBASIC2.73□□□□□ -1.97
MMP3P08254 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC2.73□□□□□ -1.97
MMP3P08254 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.73□□□□□ -1.97
MMP3P08254 CBX3P8-201ENST00000532412 525 ntBASIC2.73□□□□□ -1.97
MMP3P08254 CR383656.8-201ENST00000549046 145 ntBASIC2.73□□□□□ -1.97
MMP3P08254 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.73□□□□□ -1.97
MMP3P08254 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC2.73□□□□□ -1.97
MMP3P08254 AC107871.2-201ENST00000612894 502 ntBASIC2.73□□□□□ -1.97
MMP3P08254 AC090971.5-201ENST00000621102 293 ntBASIC2.73□□□□□ -1.97
MMP3P08254 AC099654.7-201ENST00000635788 2127 ntBASIC2.73□□□□□ -1.97
MMP3P08254 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.73□□□□□ -1.97
MMP3P08254 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
MMP3P08254 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
MMP3P08254 AL161431.1-201ENST00000618966 4205 ntBASIC2.72□□□□□ -1.97
MMP3P08254 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
MMP3P08254 RNU1-105P-201ENST00000363470 161 ntBASIC2.72□□□□□ -1.97
MMP3P08254 Y_RNA.146-201ENST00000363549 102 ntBASIC2.72□□□□□ -1.97
MMP3P08254 Y_RNA.533-201ENST00000384596 114 ntBASIC2.72□□□□□ -1.97
MMP3P08254 RNU6-1011P-201ENST00000384668 107 ntBASIC2.72□□□□□ -1.97
MMP3P08254 RN7SKP223-201ENST00000410582 62 ntBASIC2.72□□□□□ -1.97
MMP3P08254 RNU6-1245P-201ENST00000411130 106 ntBASIC2.72□□□□□ -1.97
MMP3P08254 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.72□□□□□ -1.97
MMP3P08254 AL135786.1-201ENST00000415892 214 ntBASIC2.72□□□□□ -1.97
MMP3P08254 AC003685.2-201ENST00000422795 395 ntBASIC2.72□□□□□ -1.97
MMP3P08254 USMG5P1-201ENST00000425964 177 ntBASIC2.72□□□□□ -1.97
MMP3P08254 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.72□□□□□ -1.97
MMP3P08254 AC007969.2-201ENST00000441891 191 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 145.4 ms