Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC3.09□□□□□ -1.91
RHOP08100 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
RHOP08100 RNU4-50P-201ENST00000364361 141 ntBASIC3.09□□□□□ -1.91
RHOP08100 SNORA18.3-201ENST00000384122 132 ntBASIC3.09□□□□□ -1.91
RHOP08100 SNORD116-20-201ENST00000384529 92 ntBASIC3.09□□□□□ -1.91
RHOP08100 TRAJ59-201ENST00000390480 54 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
RHOP08100 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
RHOP08100 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
RHOP08100 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.09□□□□□ -1.91
RHOP08100 RPL21P1-201ENST00000399532 476 ntBASIC3.09□□□□□ -1.91
RHOP08100 MIR190B-201ENST00000401119 79 ntBASIC3.09□□□□□ -1.91
RHOP08100 EIF1AXP1-201ENST00000419267 435 ntBASIC3.09□□□□□ -1.91
RHOP08100 AL358453.1-201ENST00000422522 250 ntBASIC3.09□□□□□ -1.91
RHOP08100 RPL23AP95-201ENST00000426806 265 ntBASIC3.09□□□□□ -1.91
RHOP08100 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC3.09□□□□□ -1.91
RHOP08100 AC007969.2-201ENST00000441891 191 ntBASIC3.09□□□□□ -1.91
RHOP08100 FCF1P4-201ENST00000448326 183 ntBASIC3.09□□□□□ -1.91
RHOP08100 Z68323.1-201ENST00000450365 519 ntTSL 3 BASIC3.09□□□□□ -1.91
RHOP08100 MTCO3P8-201ENST00000453691 755 ntBASIC3.09□□□□□ -1.91
RHOP08100 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.09□□□□□ -1.91
RHOP08100 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.09□□□□□ -1.91
RHOP08100 RPS27P29-201ENST00000463110 252 ntBASIC3.09□□□□□ -1.91
RHOP08100 AC010401.1-201ENST00000463867 348 ntBASIC3.09□□□□□ -1.91
RHOP08100 MRPL42P6-201ENST00000486397 371 ntBASIC3.09□□□□□ -1.91
RHOP08100 RN7SL20P-201ENST00000488827 297 ntBASIC3.09□□□□□ -1.91
RHOP08100 RPS29P20-201ENST00000489592 171 ntBASIC3.09□□□□□ -1.91
RHOP08100 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.09□□□□□ -1.91
RHOP08100 AC107016.2-201ENST00000547968 190 ntBASIC3.09□□□□□ -1.91
RHOP08100 AC016256.1-201ENST00000547971 354 ntBASIC3.09□□□□□ -1.91
RHOP08100 AC021739.1-201ENST00000559631 174 ntBASIC3.09□□□□□ -1.91
RHOP08100 MIR4319-201ENST00000577285 85 ntBASIC3.09□□□□□ -1.91
RHOP08100 AC020895.1-201ENST00000595362 272 ntBASIC3.09□□□□□ -1.91
RHOP08100 RPL23AP78-201ENST00000599928 470 ntBASIC3.09□□□□□ -1.91
RHOP08100 B3GNTL1P2-201ENST00000603673 288 ntBASIC3.09□□□□□ -1.91
RHOP08100 AC107871.2-201ENST00000612894 502 ntBASIC3.09□□□□□ -1.91
RHOP08100 AC024581.2-201ENST00000619986 252 ntBASIC3.09□□□□□ -1.91
RHOP08100 AC007318.2-201ENST00000620999 243 ntBASIC3.09□□□□□ -1.91
RHOP08100 AC097372.5-201ENST00000623665 376 ntBASIC3.09□□□□□ -1.91
RHOP08100 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
RHOP08100 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
RHOP08100 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.09□□□□□ -1.91
RHOP08100 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.08□□□□□ -1.92
RHOP08100 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.08□□□□□ -1.92
RHOP08100 DLEU2_6.3-201ENST00000340052 136 ntBASIC3.08□□□□□ -1.92
RHOP08100 Y_RNA.210-201ENST00000364161 110 ntBASIC3.08□□□□□ -1.92
RHOP08100 SNORD32A-201ENST00000364805 84 ntBASIC3.08□□□□□ -1.92
RHOP08100 RNU4-9P-201ENST00000364951 139 ntBASIC3.08□□□□□ -1.92
RHOP08100 MIR628-201ENST00000385229 95 ntBASIC3.08□□□□□ -1.92
RHOP08100 FTH1P15-201ENST00000406984 280 ntBASIC3.08□□□□□ -1.92
RHOP08100 RNU6-1245P-201ENST00000411130 106 ntBASIC3.08□□□□□ -1.92
RHOP08100 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.08□□□□□ -1.92
RHOP08100 AC074117.2-201ENST00000417130 397 ntBASIC3.08□□□□□ -1.92
RHOP08100 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC3.08□□□□□ -1.92
RHOP08100 MTCO3P29-201ENST00000432119 779 ntBASIC3.08□□□□□ -1.92
RHOP08100 BX679664.1-201ENST00000434429 253 ntBASIC3.08□□□□□ -1.92
RHOP08100 AL031183.1-201ENST00000457667 207 ntBASIC3.08□□□□□ -1.92
RHOP08100 MED28P2-201ENST00000475771 317 ntBASIC3.08□□□□□ -1.92
RHOP08100 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.08□□□□□ -1.92
RHOP08100 Y_RNA.668-201ENST00000516233 93 ntBASIC3.08□□□□□ -1.92
RHOP08100 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RHOP08100 AC006199.1-201ENST00000548728 219 ntBASIC3.08□□□□□ -1.92
RHOP08100 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC3.08□□□□□ -1.92
RHOP08100 MYL12BP1-201ENST00000569826 507 ntBASIC3.08□□□□□ -1.92
RHOP08100 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.08□□□□□ -1.92
RHOP08100 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC3.08□□□□□ -1.92
RHOP08100 AL121655.1-201ENST00000605811 308 ntBASIC3.08□□□□□ -1.92
RHOP08100 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.08□□□□□ -1.92
RHOP08100 MAPK10-362ENST00000641864 4484 ntBASIC3.08□□□□□ -1.92
RHOP08100 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
RHOP08100 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.08□□□□□ -1.92
RHOP08100 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RHOP08100 AC009541.1-201ENST00000438279 2662 ntBASIC3.07□□□□□ -1.92
RHOP08100 ZNF72P-201ENST00000425869 1908 ntBASIC3.07□□□□□ -1.92
RHOP08100 RNU6-487P-201ENST00000365430 104 ntBASIC3.07□□□□□ -1.92
RHOP08100 RNU6-1286P-201ENST00000383871 107 ntBASIC3.07□□□□□ -1.92
RHOP08100 RNU6-26P-201ENST00000383985 107 ntBASIC3.07□□□□□ -1.92
RHOP08100 RNU6-505P-201ENST00000384427 107 ntBASIC3.07□□□□□ -1.92
RHOP08100 RNA5SP252-201ENST00000391131 119 ntBASIC3.07□□□□□ -1.92
RHOP08100 SNORA48.8-201ENST00000391324 134 ntBASIC3.07□□□□□ -1.92
RHOP08100 LINC00448-201ENST00000438352 402 ntTSL 3 BASIC3.07□□□□□ -1.92
RHOP08100 RPL21P2-201ENST00000440049 481 ntBASIC3.07□□□□□ -1.92
RHOP08100 OSTCP8-201ENST00000445117 448 ntBASIC3.07□□□□□ -1.92
RHOP08100 AL031659.1-201ENST00000447075 539 ntBASIC3.07□□□□□ -1.92
RHOP08100 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC3.07□□□□□ -1.92
RHOP08100 RNU7-169P-201ENST00000459456 61 ntBASIC3.07□□□□□ -1.92
RHOP08100 RN7SL442P-201ENST00000473804 320 ntBASIC3.07□□□□□ -1.92
RHOP08100 AC092185.1-201ENST00000491371 97 ntBASIC3.07□□□□□ -1.92
RHOP08100 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.07□□□□□ -1.92
RHOP08100 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC3.07□□□□□ -1.92
RHOP08100 RNU7-175P-201ENST00000515915 61 ntBASIC3.07□□□□□ -1.92
RHOP08100 RNA5SP217-201ENST00000515959 91 ntBASIC3.07□□□□□ -1.92
RHOP08100 RNU1-143P-201ENST00000516296 146 ntBASIC3.07□□□□□ -1.92
RHOP08100 AC091144.1-201ENST00000519573 138 ntBASIC3.07□□□□□ -1.92
RHOP08100 AC034114.1-201ENST00000520293 285 ntBASIC3.07□□□□□ -1.92
RHOP08100 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RHOP08100 AP000867.2-201ENST00000532468 320 ntBASIC3.07□□□□□ -1.92
RHOP08100 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.07□□□□□ -1.92
RHOP08100 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.07□□□□□ -1.92
RHOP08100 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.07□□□□□ -1.92
RHOP08100 AL390123.1-201ENST00000603216 237 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms