Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AC068781.1-201ENST00000488231 618 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.45□□□□□ -2.02
COL2A1P02458 MTND4LP22-201ENST00000508209 276 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 MRPS35P2-201ENST00000508242 191 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 RNU2-69P-201ENST00000516061 100 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 SNORA14.1-201ENST00000516113 141 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 Y_RNA.680-201ENST00000516441 93 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 RNU6-1069P-201ENST00000516612 133 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 SNORD116.3-201ENST00000517176 78 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 AC090115.3-201ENST00000553218 849 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 MIR3941-201ENST00000582572 103 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 AL670379.6-201ENST00000603753 252 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 AL138889.2-201ENST00000603883 242 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 AL670379.1-201ENST00000604752 252 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 AL670379.2-201ENST00000604983 252 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 AL670379.5-201ENST00000605253 252 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 AL670379.8-201ENST00000605353 252 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 AL670379.7-201ENST00000605823 252 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 AL365434.2-201ENST00000607979 234 ntBASIC2.45□□□□□ -2.02
COL2A1P02458 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.44□□□□□ -2.02
COL2A1P02458 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.44□□□□□ -2.02
COL2A1P02458 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC2.44□□□□□ -2.02
COL2A1P02458 MIR337-201ENST00000362281 93 ntBASIC2.44□□□□□ -2.02
COL2A1P02458 SNORD3E-201ENST00000362899 217 ntBASIC2.44□□□□□ -2.02
COL2A1P02458 Y_RNA.210-201ENST00000364161 110 ntBASIC2.44□□□□□ -2.02
COL2A1P02458 Y_RNA.252-201ENST00000364556 101 ntBASIC2.44□□□□□ -2.02
COL2A1P02458 Y_RNA.314-201ENST00000365114 102 ntBASIC2.44□□□□□ -2.02
COL2A1P02458 RNU6-806P-201ENST00000365147 105 ntBASIC2.44□□□□□ -2.02
COL2A1P02458 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
COL2A1P02458 RNU6-842P-201ENST00000384269 107 ntBASIC2.44□□□□□ -2.02
COL2A1P02458 Y_RNA.477-201ENST00000384352 108 ntBASIC2.44□□□□□ -2.02
COL2A1P02458 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
COL2A1P02458 RNU6-1109P-201ENST00000391187 107 ntBASIC2.44□□□□□ -2.02
COL2A1P02458 SNORA75.6-201ENST00000391318 127 ntBASIC2.44□□□□□ -2.02
COL2A1P02458 Y_RNA.618-201ENST00000410949 107 ntBASIC2.44□□□□□ -2.02
COL2A1P02458 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
COL2A1P02458 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.44□□□□□ -2.02
COL2A1P02458 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.44□□□□□ -2.02
COL2A1P02458 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.44□□□□□ -2.02
COL2A1P02458 AC004866.2-201ENST00000438285 481 ntBASIC2.44□□□□□ -2.02
COL2A1P02458 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.44□□□□□ -2.02
COL2A1P02458 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC2.44□□□□□ -2.02
COL2A1P02458 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.44□□□□□ -2.02
COL2A1P02458 MTCO3P45-201ENST00000443036 613 ntBASIC2.44□□□□□ -2.02
COL2A1P02458 CHEK2P4-201ENST00000450340 246 ntBASIC2.44□□□□□ -2.02
COL2A1P02458 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.44□□□□□ -2.02
COL2A1P02458 AC079140.5-201ENST00000507882 310 ntBASIC2.44□□□□□ -2.02
COL2A1P02458 RNU2-58P-201ENST00000516403 183 ntBASIC2.44□□□□□ -2.02
COL2A1P02458 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC2.44□□□□□ -2.02
COL2A1P02458 AP005902.1-201ENST00000521358 186 ntBASIC2.44□□□□□ -2.02
COL2A1P02458 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.44□□□□□ -2.02
COL2A1P02458 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC2.44□□□□□ -2.02
COL2A1P02458 LRRC37A5P-203ENST00000580181 585 ntBASIC2.44□□□□□ -2.02
COL2A1P02458 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2.44□□□□□ -2.02
COL2A1P02458 AL359821.1-201ENST00000605519 182 ntBASIC2.44□□□□□ -2.02
COL2A1P02458 AC002044.1-201ENST00000606707 158 ntBASIC2.44□□□□□ -2.02
COL2A1P02458 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.44□□□□□ -2.02
COL2A1P02458 TUG1_2.1-201ENST00000614234 87 ntBASIC2.44□□□□□ -2.02
COL2A1P02458 MPP6-209ENST00000625307 126 ntTSL 5 BASIC2.44□□□□□ -2.02
COL2A1P02458 SNORA50A-202ENST00000629536 136 ntBASIC2.44□□□□□ -2.02
COL2A1P02458 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.44□□□□□ -2.02
COL2A1P02458 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.43□□□□□ -2.02
COL2A1P02458 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.43□□□□□ -2.02
COL2A1P02458 RNU6-490P-201ENST00000362985 107 ntBASIC2.43□□□□□ -2.02
COL2A1P02458 Y_RNA.122-201ENST00000363331 96 ntBASIC2.43□□□□□ -2.02
COL2A1P02458 AC117470.1-201ENST00000381974 330 ntBASIC2.43□□□□□ -2.02
COL2A1P02458 MIR135A2-201ENST00000384854 100 ntBASIC2.43□□□□□ -2.02
COL2A1P02458 RNU6-823P-201ENST00000391042 103 ntBASIC2.43□□□□□ -2.02
COL2A1P02458 RNU6-754P-201ENST00000391166 107 ntBASIC2.43□□□□□ -2.02
COL2A1P02458 AL109755.1-201ENST00000401791 649 ntBASIC2.43□□□□□ -2.02
COL2A1P02458 RNU6-101P-201ENST00000410323 104 ntBASIC2.43□□□□□ -2.02
COL2A1P02458 AL096701.2-201ENST00000416920 238 ntBASIC2.43□□□□□ -2.02
COL2A1P02458 RPS15AP10-201ENST00000432472 382 ntBASIC2.43□□□□□ -2.02
COL2A1P02458 AL353997.1-201ENST00000432936 108 ntBASIC2.43□□□□□ -2.02
COL2A1P02458 SNAP23P1-201ENST00000433229 246 ntBASIC2.43□□□□□ -2.02
COL2A1P02458 NEFMP1-201ENST00000443423 1006 ntBASIC2.43□□□□□ -2.02
COL2A1P02458 AL031274.1-201ENST00000450334 232 ntBASIC2.43□□□□□ -2.02
COL2A1P02458 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.43□□□□□ -2.02
COL2A1P02458 AC010683.1-201ENST00000473673 378 ntBASIC2.43□□□□□ -2.02
COL2A1P02458 AC018437.1-201ENST00000492214 406 ntBASIC2.43□□□□□ -2.02
COL2A1P02458 SETP7-201ENST00000552169 453 ntBASIC2.43□□□□□ -2.02
COL2A1P02458 MIR5002-201ENST00000584713 97 ntBASIC2.43□□□□□ -2.02
COL2A1P02458 AC098657.3-201ENST00000620434 263 ntBASIC2.43□□□□□ -2.02
COL2A1P02458 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
COL2A1P02458 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
COL2A1P02458 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
COL2A1P02458 Y_RNA.64-201ENST00000362845 102 ntBASIC2.42□□□□□ -2.02
COL2A1P02458 SNORA25.9-201ENST00000365087 128 ntBASIC2.42□□□□□ -2.02
COL2A1P02458 Y_RNA.424-201ENST00000384063 103 ntBASIC2.42□□□□□ -2.02
COL2A1P02458 SNORD51-201ENST00000384320 80 ntBASIC2.42□□□□□ -2.02
COL2A1P02458 RNU2-23P-201ENST00000410545 195 ntBASIC2.42□□□□□ -2.02
COL2A1P02458 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC2.42□□□□□ -2.02
COL2A1P02458 RPL21P90-201ENST00000415692 466 ntBASIC2.42□□□□□ -2.02
COL2A1P02458 TRIAP1P1-201ENST00000427062 225 ntBASIC2.42□□□□□ -2.02
COL2A1P02458 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC2.42□□□□□ -2.02
COL2A1P02458 EZH2P1-201ENST00000431167 291 ntBASIC2.42□□□□□ -2.02
COL2A1P02458 SUMO1P3-201ENST00000439961 304 ntBASIC2.42□□□□□ -2.02
COL2A1P02458 RPS24P6-201ENST00000452670 400 ntBASIC2.42□□□□□ -2.02
COL2A1P02458 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.42□□□□□ -2.02
COL2A1P02458 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 104.6 ms