Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 MTCYBP2-201ENST00000407745 171 ntBASIC2.34□□□□□ -2.03
BEST1O76090 RNA5SP425-201ENST00000410336 112 ntBASIC2.34□□□□□ -2.03
BEST1O76090 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.34□□□□□ -2.03
BEST1O76090 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC2.34□□□□□ -2.03
BEST1O76090 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.34□□□□□ -2.03
BEST1O76090 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.34□□□□□ -2.03
BEST1O76090 AC245102.2-201ENST00000448956 180 ntBASIC2.34□□□□□ -2.03
BEST1O76090 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC2.34□□□□□ -2.03
BEST1O76090 HMGN2P26-201ENST00000463169 339 ntBASIC2.34□□□□□ -2.03
BEST1O76090 APOA2-205ENST00000468465 421 ntTSL 2 BASIC2.34□□□□□ -2.03
BEST1O76090 AC104564.1-201ENST00000493028 407 ntBASIC2.34□□□□□ -2.03
BEST1O76090 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.34□□□□□ -2.03
BEST1O76090 AC092436.3-201ENST00000511788 257 ntBASIC2.34□□□□□ -2.03
BEST1O76090 AC025465.4-201ENST00000513422 638 ntBASIC2.34□□□□□ -2.03
BEST1O76090 Y_RNA.665-201ENST00000516177 98 ntBASIC2.34□□□□□ -2.03
BEST1O76090 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.34□□□□□ -2.03
BEST1O76090 SNORA31.16-201ENST00000516773 139 ntBASIC2.34□□□□□ -2.03
BEST1O76090 AC104576.1-201ENST00000524225 88 ntBASIC2.34□□□□□ -2.03
BEST1O76090 SCOCP1-201ENST00000554676 349 ntBASIC2.34□□□□□ -2.03
BEST1O76090 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.34□□□□□ -2.03
BEST1O76090 MIR4529-201ENST00000578110 78 ntBASIC2.34□□□□□ -2.03
BEST1O76090 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.34□□□□□ -2.03
BEST1O76090 AC022202.1-201ENST00000613515 211 ntBASIC2.34□□□□□ -2.03
BEST1O76090 FAM157A-202ENST00000615155 405 ntBASIC2.34□□□□□ -2.03
BEST1O76090 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.34□□□□□ -2.03
BEST1O76090 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.34□□□□□ -2.03
BEST1O76090 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
BEST1O76090 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
BEST1O76090 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
BEST1O76090 Y_RNA.6-201ENST00000362350 114 ntBASIC2.33□□□□□ -2.04
BEST1O76090 Y_RNA.100-201ENST00000363141 102 ntBASIC2.33□□□□□ -2.04
BEST1O76090 SNORD113-7-201ENST00000363762 77 ntBASIC2.33□□□□□ -2.04
BEST1O76090 SNORD32B-201ENST00000364460 84 ntBASIC2.33□□□□□ -2.04
BEST1O76090 Y_RNA.530-201ENST00000384587 101 ntBASIC2.33□□□□□ -2.04
BEST1O76090 HMGN2P39-201ENST00000398005 273 ntBASIC2.33□□□□□ -2.04
BEST1O76090 AL023284.1-201ENST00000403956 276 ntBASIC2.33□□□□□ -2.04
BEST1O76090 Y_RNA.615-201ENST00000410769 117 ntBASIC2.33□□□□□ -2.04
BEST1O76090 SRIP3-201ENST00000413200 219 ntBASIC2.33□□□□□ -2.04
BEST1O76090 EIF1AXP1-201ENST00000419267 435 ntBASIC2.33□□□□□ -2.04
BEST1O76090 AL356320.1-201ENST00000429616 163 ntBASIC2.33□□□□□ -2.04
BEST1O76090 GPM6BP3-201ENST00000442797 145 ntBASIC2.33□□□□□ -2.04
BEST1O76090 AC107032.1-201ENST00000485945 480 ntBASIC2.33□□□□□ -2.04
BEST1O76090 RNU6-1332P-201ENST00000516666 104 ntBASIC2.33□□□□□ -2.04
BEST1O76090 AC016256.1-201ENST00000547971 354 ntBASIC2.33□□□□□ -2.04
BEST1O76090 SNRPGP18-201ENST00000553000 214 ntBASIC2.33□□□□□ -2.04
BEST1O76090 AC026464.5-201ENST00000562497 722 ntBASIC2.33□□□□□ -2.04
BEST1O76090 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC2.33□□□□□ -2.04
BEST1O76090 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.33□□□□□ -2.04
BEST1O76090 AC024614.3-201ENST00000637860 256 ntBASIC2.33□□□□□ -2.04
BEST1O76090 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.33□□□□□ -2.04
BEST1O76090 AC009541.1-201ENST00000438279 2662 ntBASIC2.33□□□□□ -2.04
BEST1O76090 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
BEST1O76090 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
BEST1O76090 RNU4-12P-201ENST00000365233 139 ntBASIC2.32□□□□□ -2.04
BEST1O76090 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
BEST1O76090 SNORA70B-201ENST00000384210 135 ntBASIC2.32□□□□□ -2.04
BEST1O76090 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.32□□□□□ -2.04
BEST1O76090 AC091874.1-201ENST00000511402 339 ntBASIC2.32□□□□□ -2.04
BEST1O76090 RNU6-965P-201ENST00000516721 96 ntBASIC2.32□□□□□ -2.04
BEST1O76090 AP000889.2-201ENST00000532684 490 ntBASIC2.32□□□□□ -2.04
BEST1O76090 AC026371.1-201ENST00000551867 419 ntBASIC2.32□□□□□ -2.04
BEST1O76090 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.32□□□□□ -2.04
BEST1O76090 MIR1273D-201ENST00000577266 86 ntBASIC2.32□□□□□ -2.04
BEST1O76090 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.32□□□□□ -2.04
BEST1O76090 MIR4298-201ENST00000584380 73 ntBASIC2.32□□□□□ -2.04
BEST1O76090 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.32□□□□□ -2.04
BEST1O76090 AC078795.3-201ENST00000602913 472 ntBASIC2.32□□□□□ -2.04
BEST1O76090 AP000654.2-201ENST00000605633 586 ntBASIC2.32□□□□□ -2.04
BEST1O76090 AC104458.1-201ENST00000608243 463 ntBASIC2.32□□□□□ -2.04
BEST1O76090 AC068944.2-201ENST00000610373 403 ntBASIC2.32□□□□□ -2.04
BEST1O76090 AC009831.4-201ENST00000620744 325 ntBASIC2.32□□□□□ -2.04
BEST1O76090 AL136221.1-201ENST00000621449 509 ntBASIC2.32□□□□□ -2.04
BEST1O76090 AL450472.1-202ENST00000637286 180 ntBASIC2.32□□□□□ -2.04
BEST1O76090 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
BEST1O76090 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
BEST1O76090 U8.2-201ENST00000363156 134 ntBASIC2.31□□□□□ -2.04
BEST1O76090 RNU6-877P-201ENST00000383868 107 ntBASIC2.31□□□□□ -2.04
BEST1O76090 SNORA67.3-201ENST00000384366 140 ntBASIC2.31□□□□□ -2.04
BEST1O76090 SNORA64-201ENST00000384674 134 ntBASIC2.31□□□□□ -2.04
BEST1O76090 MIR29C-201ENST00000385231 88 ntBASIC2.31□□□□□ -2.04
BEST1O76090 SNORA46.1-201ENST00000391069 153 ntBASIC2.31□□□□□ -2.04
BEST1O76090 RNU6-332P-201ENST00000391193 108 ntBASIC2.31□□□□□ -2.04
BEST1O76090 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
BEST1O76090 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.31□□□□□ -2.04
BEST1O76090 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC2.31□□□□□ -2.04
BEST1O76090 ZNF885P-201ENST00000420174 1098 ntBASIC2.31□□□□□ -2.04
BEST1O76090 OOSP1P1-201ENST00000423265 274 ntBASIC2.31□□□□□ -2.04
BEST1O76090 PRELID3BP1-201ENST00000457142 540 ntBASIC2.31□□□□□ -2.04
BEST1O76090 RPS29P27-201ENST00000463711 170 ntBASIC2.31□□□□□ -2.04
BEST1O76090 RPS29P21-201ENST00000496272 170 ntBASIC2.31□□□□□ -2.04
BEST1O76090 MTCO1P29-201ENST00000496868 288 ntBASIC2.31□□□□□ -2.04
BEST1O76090 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.31□□□□□ -2.04
BEST1O76090 RNU2-19P-201ENST00000517288 84 ntBASIC2.31□□□□□ -2.04
BEST1O76090 AC023796.2-201ENST00000545410 451 ntTSL 3 BASIC2.31□□□□□ -2.04
BEST1O76090 LINC02301-203ENST00000555798 789 ntTSL 3 BASIC2.31□□□□□ -2.04
BEST1O76090 CYP4A27P-201ENST00000567218 190 ntBASIC2.31□□□□□ -2.04
BEST1O76090 MIR6895-201ENST00000613497 78 ntBASIC2.31□□□□□ -2.04
BEST1O76090 SNORA43.4-201ENST00000629559 138 ntBASIC2.31□□□□□ -2.04
BEST1O76090 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.31□□□□□ -2.04
BEST1O76090 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms