Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 RNA5SP124-201ENST00000362739 110 ntBASIC4.08□□□□□ -1.76
PRPF40AO75400 snoU2_19.2-201ENST00000363024 80 ntBASIC4.08□□□□□ -1.76
PRPF40AO75400 SNORD81.1-201ENST00000363064 77 ntBASIC4.08□□□□□ -1.76
PRPF40AO75400 RNU6-873P-201ENST00000363833 107 ntBASIC4.08□□□□□ -1.76
PRPF40AO75400 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
PRPF40AO75400 MIR200C-201ENST00000384980 68 ntBASIC4.08□□□□□ -1.76
PRPF40AO75400 RNA5SP354-201ENST00000391247 136 ntBASIC4.08□□□□□ -1.76
PRPF40AO75400 MIR548H3-201ENST00000408771 118 ntBASIC4.08□□□□□ -1.76
PRPF40AO75400 AL133547.1-201ENST00000448546 220 ntBASIC4.08□□□□□ -1.76
PRPF40AO75400 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC4.08□□□□□ -1.76
PRPF40AO75400 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.08□□□□□ -1.76
PRPF40AO75400 AC107222.1-201ENST00000510899 637 ntBASIC4.08□□□□□ -1.76
PRPF40AO75400 RNU5F-2P-201ENST00000516066 82 ntBASIC4.08□□□□□ -1.76
PRPF40AO75400 MIR3923-201ENST00000579521 83 ntBASIC4.08□□□□□ -1.76
PRPF40AO75400 MIR92B-201ENST00000607575 96 ntBASIC4.08□□□□□ -1.76
PRPF40AO75400 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
PRPF40AO75400 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.07□□□□□ -1.76
PRPF40AO75400 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PRPF40AO75400 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC4.07□□□□□ -1.76
PRPF40AO75400 AL391987.6-201ENST00000305671 199 ntBASIC4.07□□□□□ -1.76
PRPF40AO75400 SNORD113-8-201ENST00000363497 74 ntBASIC4.07□□□□□ -1.76
PRPF40AO75400 Y_RNA.478-201ENST00000384358 107 ntBASIC4.07□□□□□ -1.76
PRPF40AO75400 U3.26-201ENST00000391236 204 ntBASIC4.07□□□□□ -1.76
PRPF40AO75400 SNAP23-203ENST00000397138 477 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PRPF40AO75400 AC017079.2-201ENST00000416102 485 ntBASIC4.07□□□□□ -1.76
PRPF40AO75400 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.07□□□□□ -1.76
PRPF40AO75400 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC4.07□□□□□ -1.76
PRPF40AO75400 MTND4LP30-201ENST00000454092 297 ntBASIC4.07□□□□□ -1.76
PRPF40AO75400 AL133162.1-201ENST00000463228 453 ntBASIC4.07□□□□□ -1.76
PRPF40AO75400 AL049830.2-201ENST00000480072 201 ntBASIC4.07□□□□□ -1.76
PRPF40AO75400 RNU6ATAC13P-201ENST00000516152 131 ntBASIC4.07□□□□□ -1.76
PRPF40AO75400 SNORA70.19-201ENST00000516717 90 ntBASIC4.07□□□□□ -1.76
PRPF40AO75400 AC074050.1-201ENST00000563247 211 ntBASIC4.07□□□□□ -1.76
PRPF40AO75400 AC012433.1-201ENST00000588916 398 ntBASIC4.07□□□□□ -1.76
PRPF40AO75400 AP001282.2-201ENST00000616149 309 ntBASIC4.07□□□□□ -1.76
PRPF40AO75400 MIR7153-201ENST00000637758 57 ntBASIC4.07□□□□□ -1.76
PRPF40AO75400 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC4.07□□□□□ -1.76
PRPF40AO75400 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
PRPF40AO75400 ZNF204P-201ENST00000416749 2397 ntBASIC4.06□□□□□ -1.76
PRPF40AO75400 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
PRPF40AO75400 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PRPF40AO75400 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC4.06□□□□□ -1.76
PRPF40AO75400 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PRPF40AO75400 RNU6-529P-201ENST00000363383 104 ntBASIC4.06□□□□□ -1.76
PRPF40AO75400 Y_RNA.237-201ENST00000364439 102 ntBASIC4.06□□□□□ -1.76
PRPF40AO75400 U8.11-201ENST00000384699 133 ntBASIC4.06□□□□□ -1.76
PRPF40AO75400 U8.12-201ENST00000384701 133 ntBASIC4.06□□□□□ -1.76
PRPF40AO75400 MIR329-1-201ENST00000385028 80 ntBASIC4.06□□□□□ -1.76
PRPF40AO75400 MIR670-201ENST00000390142 98 ntBASIC4.06□□□□□ -1.76
PRPF40AO75400 Y_RNA.581-201ENST00000391017 97 ntBASIC4.06□□□□□ -1.76
PRPF40AO75400 MIR320B2-201ENST00000408479 138 ntBASIC4.06□□□□□ -1.76
PRPF40AO75400 AL365496.1-201ENST00000426885 215 ntBASIC4.06□□□□□ -1.76
PRPF40AO75400 AC112220.1-201ENST00000434628 355 ntBASIC4.06□□□□□ -1.76
PRPF40AO75400 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC4.06□□□□□ -1.76
PRPF40AO75400 U8.18-201ENST00000459285 133 ntBASIC4.06□□□□□ -1.76
PRPF40AO75400 AC112771.1-201ENST00000463581 102 ntBASIC4.06□□□□□ -1.76
PRPF40AO75400 AC021205.2-201ENST00000480069 347 ntBASIC4.06□□□□□ -1.76
PRPF40AO75400 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC4.06□□□□□ -1.76
PRPF40AO75400 SNORA31.6-201ENST00000516241 130 ntBASIC4.06□□□□□ -1.76
PRPF40AO75400 Y_RNA.673-201ENST00000516306 88 ntBASIC4.06□□□□□ -1.76
PRPF40AO75400 SNORA25.14-201ENST00000516481 132 ntBASIC4.06□□□□□ -1.76
PRPF40AO75400 DEFB108E-201ENST00000524692 240 ntBASIC4.06□□□□□ -1.76
PRPF40AO75400 AP003123.1-201ENST00000526041 333 ntTSL 2 BASIC4.06□□□□□ -1.76
PRPF40AO75400 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.06□□□□□ -1.76
PRPF40AO75400 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.06□□□□□ -1.76
PRPF40AO75400 AC010999.1-201ENST00000611856 324 ntBASIC4.06□□□□□ -1.76
PRPF40AO75400 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC4.06□□□□□ -1.76
PRPF40AO75400 XIST_intron.1-201ENST00000619444 68 ntBASIC4.06□□□□□ -1.76
PRPF40AO75400 AC012442.3-202ENST00000636742 206 ntBASIC4.06□□□□□ -1.76
PRPF40AO75400 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PRPF40AO75400 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
PRPF40AO75400 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PRPF40AO75400 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
PRPF40AO75400 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
PRPF40AO75400 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.05□□□□□ -1.76
PRPF40AO75400 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.05□□□□□ -1.76
PRPF40AO75400 SNORD63-201ENST00000384262 68 ntBASIC4.05□□□□□ -1.76
PRPF40AO75400 Y_RNA.515-201ENST00000384535 112 ntBASIC4.05□□□□□ -1.76
PRPF40AO75400 Y_RNA.595-201ENST00000410403 105 ntBASIC4.05□□□□□ -1.76
PRPF40AO75400 AC139712.2-201ENST00000424302 339 ntBASIC4.05□□□□□ -1.76
PRPF40AO75400 ARF4P2-201ENST00000430209 526 ntBASIC4.05□□□□□ -1.76
PRPF40AO75400 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC4.05□□□□□ -1.76
PRPF40AO75400 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC4.05□□□□□ -1.76
PRPF40AO75400 AC005002.2-201ENST00000438228 269 ntBASIC4.05□□□□□ -1.76
PRPF40AO75400 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.05□□□□□ -1.76
PRPF40AO75400 Z98949.2-201ENST00000440996 144 ntBASIC4.05□□□□□ -1.76
PRPF40AO75400 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC4.05□□□□□ -1.76
PRPF40AO75400 RN7SL594P-201ENST00000470590 287 ntBASIC4.05□□□□□ -1.76
PRPF40AO75400 RNU4ATAC3P-201ENST00000516699 126 ntBASIC4.05□□□□□ -1.76
PRPF40AO75400 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC4.05□□□□□ -1.76
PRPF40AO75400 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC4.05□□□□□ -1.76
PRPF40AO75400 ST7-AS1_1.1-201ENST00000611142 116 ntBASIC4.05□□□□□ -1.76
PRPF40AO75400 uc_338.14-201ENST00000613162 166 ntBASIC4.05□□□□□ -1.76
PRPF40AO75400 MIR8058-201ENST00000615737 89 ntBASIC4.05□□□□□ -1.76
PRPF40AO75400 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.05□□□□□ -1.76
PRPF40AO75400 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.05□□□□□ -1.76
PRPF40AO75400 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC4.05□□□□□ -1.76
PRPF40AO75400 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PRPF40AO75400 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PRPF40AO75400 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 119.8 ms