Protein–RNA interactions for Protein: O60840

CACNA1F, Voltage-dependent L-type calcium channel subunit alpha-1F, humanhuman

Predictions only

Length 1,977 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1FO60840 RPL30P15-201ENST00000457129 321 ntBASIC2.45□□□□□ -2.02
CACNA1FO60840 AC107393.1-201ENST00000512403 346 ntBASIC2.45□□□□□ -2.02
CACNA1FO60840 SNORA25.10-201ENST00000515926 124 ntBASIC2.45□□□□□ -2.02
CACNA1FO60840 RNU6-991P-201ENST00000516168 107 ntBASIC2.45□□□□□ -2.02
CACNA1FO60840 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.45□□□□□ -2.02
CACNA1FO60840 RNA5SP384-201ENST00000516615 116 ntBASIC2.45□□□□□ -2.02
CACNA1FO60840 RNU6-1213P-201ENST00000517075 94 ntBASIC2.45□□□□□ -2.02
CACNA1FO60840 AC018462.2-201ENST00000605375 395 ntBASIC2.45□□□□□ -2.02
CACNA1FO60840 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC2.45□□□□□ -2.02
CACNA1FO60840 RNU5A-1-201ENST00000362698 116 ntBASIC2.44□□□□□ -2.02
CACNA1FO60840 RNU6-1317P-201ENST00000364582 104 ntBASIC2.44□□□□□ -2.02
CACNA1FO60840 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC2.44□□□□□ -2.02
CACNA1FO60840 PMCHL1-202ENST00000423102 261 ntBASIC2.44□□□□□ -2.02
CACNA1FO60840 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.44□□□□□ -2.02
CACNA1FO60840 AC003989.2-201ENST00000440224 169 ntBASIC2.44□□□□□ -2.02
CACNA1FO60840 RPS26P21-201ENST00000475397 348 ntBASIC2.44□□□□□ -2.02
CACNA1FO60840 MTND3P25-201ENST00000509243 135 ntBASIC2.44□□□□□ -2.02
CACNA1FO60840 RNU2-69P-201ENST00000516061 100 ntBASIC2.44□□□□□ -2.02
CACNA1FO60840 Y_RNA.670-201ENST00000516255 105 ntBASIC2.44□□□□□ -2.02
CACNA1FO60840 SNORA31.11-201ENST00000516528 139 ntBASIC2.44□□□□□ -2.02
CACNA1FO60840 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.44□□□□□ -2.02
CACNA1FO60840 AC022616.4-201ENST00000522985 181 ntBASIC2.44□□□□□ -2.02
CACNA1FO60840 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.44□□□□□ -2.02
CACNA1FO60840 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.44□□□□□ -2.02
CACNA1FO60840 AL669831.3-213ENST00000636676 183 ntBASIC2.44□□□□□ -2.02
CACNA1FO60840 VTRNA1-1-201ENST00000363120 99 ntBASIC2.43□□□□□ -2.02
CACNA1FO60840 RNU6-266P-201ENST00000364225 107 ntBASIC2.43□□□□□ -2.02
CACNA1FO60840 RNU6-1050P-201ENST00000410388 107 ntBASIC2.43□□□□□ -2.02
CACNA1FO60840 Z85995.1-201ENST00000415547 335 ntBASIC2.43□□□□□ -2.02
CACNA1FO60840 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC2.43□□□□□ -2.02
CACNA1FO60840 RPL27AP8-201ENST00000424277 446 ntBASIC2.43□□□□□ -2.02
CACNA1FO60840 AC079780.1-201ENST00000428259 207 ntBASIC2.43□□□□□ -2.02
CACNA1FO60840 AL669831.1-202ENST00000428504 417 ntBASIC2.43□□□□□ -2.02
CACNA1FO60840 AL160004.2-201ENST00000432935 350 ntBASIC2.43□□□□□ -2.02
CACNA1FO60840 AL591806.2-201ENST00000433122 173 ntBASIC2.43□□□□□ -2.02
CACNA1FO60840 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC2.43□□□□□ -2.02
CACNA1FO60840 RNU7-167P-201ENST00000459160 62 ntBASIC2.43□□□□□ -2.02
CACNA1FO60840 RPL31P60-201ENST00000478450 367 ntBASIC2.43□□□□□ -2.02
CACNA1FO60840 RPL7P42-201ENST00000481005 679 ntBASIC2.43□□□□□ -2.02
CACNA1FO60840 AC026782.1-201ENST00000512952 449 ntBASIC2.43□□□□□ -2.02
CACNA1FO60840 RNU6-470P-201ENST00000515954 104 ntBASIC2.43□□□□□ -2.02
CACNA1FO60840 MIR892C-201ENST00000516410 77 ntBASIC2.43□□□□□ -2.02
CACNA1FO60840 Y_RNA.711-201ENST00000516993 102 ntBASIC2.43□□□□□ -2.02
CACNA1FO60840 RNU6-1137P-201ENST00000517073 99 ntBASIC2.43□□□□□ -2.02
CACNA1FO60840 RNU1-54P-201ENST00000517181 120 ntBASIC2.43□□□□□ -2.02
CACNA1FO60840 AC023442.1-201ENST00000531247 422 ntBASIC2.43□□□□□ -2.02
CACNA1FO60840 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC2.43□□□□□ -2.02
CACNA1FO60840 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
CACNA1FO60840 MTND5P16-201ENST00000460269 1703 ntBASIC2.43□□□□□ -2.02
CACNA1FO60840 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.43□□□□□ -2.02
CACNA1FO60840 IL36B-202ENST00000327407 1052 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
CACNA1FO60840 RNA5SP219-201ENST00000390940 113 ntBASIC2.43□□□□□ -2.02
CACNA1FO60840 RNU6-293P-201ENST00000411259 106 ntBASIC2.43□□□□□ -2.02
CACNA1FO60840 AL031183.1-201ENST00000457667 207 ntBASIC2.43□□□□□ -2.02
CACNA1FO60840 RPL17P19-201ENST00000489069 552 ntBASIC2.43□□□□□ -2.02
CACNA1FO60840 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.43□□□□□ -2.02
CACNA1FO60840 RPS29P11-201ENST00000496507 171 ntBASIC2.43□□□□□ -2.02
CACNA1FO60840 AC108210.2-201ENST00000503681 201 ntBASIC2.43□□□□□ -2.02
CACNA1FO60840 SUMO2P6-201ENST00000505273 288 ntBASIC2.43□□□□□ -2.02
CACNA1FO60840 RNU6-764P-201ENST00000516396 105 ntBASIC2.43□□□□□ -2.02
CACNA1FO60840 AP006587.4-201ENST00000526053 529 ntBASIC2.43□□□□□ -2.02
CACNA1FO60840 AC084851.1-201ENST00000529105 249 ntBASIC2.43□□□□□ -2.02
CACNA1FO60840 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.43□□□□□ -2.02
CACNA1FO60840 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC2.43□□□□□ -2.02
CACNA1FO60840 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.43□□□□□ -2.02
CACNA1FO60840 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.43□□□□□ -2.02
CACNA1FO60840 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC2.43□□□□□ -2.02
CACNA1FO60840 AC090617.7-201ENST00000623952 126 ntBASIC2.43□□□□□ -2.02
CACNA1FO60840 AC110079.1-202ENST00000635213 138 ntBASIC2.43□□□□□ -2.02
CACNA1FO60840 AL512643.1-201ENST00000635735 524 ntBASIC2.43□□□□□ -2.02
CACNA1FO60840 SAGE1-202ENST00000370709 2879 ntAPPRIS P2 TSL 5 BASIC2.42□□□□□ -2.02
CACNA1FO60840 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.42□□□□□ -2.02
CACNA1FO60840 RNU6-715P-201ENST00000365204 103 ntBASIC2.42□□□□□ -2.02
CACNA1FO60840 Y_RNA.422-201ENST00000384054 114 ntBASIC2.42□□□□□ -2.02
CACNA1FO60840 Y_RNA.428-201ENST00000384078 102 ntBASIC2.42□□□□□ -2.02
CACNA1FO60840 SNORA67.3-201ENST00000384366 140 ntBASIC2.42□□□□□ -2.02
CACNA1FO60840 MIR514A1-201ENST00000385133 98 ntBASIC2.42□□□□□ -2.02
CACNA1FO60840 RN7SKP158-201ENST00000410453 326 ntBASIC2.42□□□□□ -2.02
CACNA1FO60840 Y_RNA.605-201ENST00000410577 105 ntBASIC2.42□□□□□ -2.02
CACNA1FO60840 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC2.42□□□□□ -2.02
CACNA1FO60840 AL359672.1-201ENST00000442302 409 ntBASIC2.42□□□□□ -2.02
CACNA1FO60840 RNU6-953P-201ENST00000459154 107 ntBASIC2.42□□□□□ -2.02
CACNA1FO60840 RPS20P22-201ENST00000473700 357 ntBASIC2.42□□□□□ -2.02
CACNA1FO60840 RPS15AP34-201ENST00000487776 387 ntBASIC2.42□□□□□ -2.02
CACNA1FO60840 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC2.42□□□□□ -2.02
CACNA1FO60840 AC005741.1-201ENST00000511094 432 ntBASIC2.42□□□□□ -2.02
CACNA1FO60840 RNA5SP290-201ENST00000517133 127 ntBASIC2.42□□□□□ -2.02
CACNA1FO60840 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.42□□□□□ -2.02
CACNA1FO60840 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
CACNA1FO60840 AC126177.2-201ENST00000552154 452 ntTSL 3 BASIC2.42□□□□□ -2.02
CACNA1FO60840 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.42□□□□□ -2.02
CACNA1FO60840 AC006600.1-201ENST00000572529 153 ntBASIC2.42□□□□□ -2.02
CACNA1FO60840 AP002826.1-201ENST00000608835 315 ntBASIC2.42□□□□□ -2.02
CACNA1FO60840 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC2.42□□□□□ -2.02
CACNA1FO60840 AL161423.1-201ENST00000613700 262 ntBASIC2.42□□□□□ -2.02
CACNA1FO60840 AL159153.1-201ENST00000619688 317 ntBASIC2.42□□□□□ -2.02
CACNA1FO60840 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
CACNA1FO60840 MTND5P30-201ENST00000452896 1731 ntBASIC2.42□□□□□ -2.02
CACNA1FO60840 AC022336.2-201ENST00000568966 2538 ntBASIC2.42□□□□□ -2.02
CACNA1FO60840 AC138915.1-201ENST00000565427 1685 ntBASIC2.42□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms