Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 Y_RNA.524-201ENST00000384564 100 ntBASIC3.21□□□□□ -1.9
PCDHGA12O60330 Y_RNA.561-201ENST00000384694 100 ntBASIC3.21□□□□□ -1.9
PCDHGA12O60330 U6atac.2-201ENST00000408644 118 ntBASIC3.21□□□□□ -1.9
PCDHGA12O60330 MCFD2P1-201ENST00000417812 300 ntBASIC3.21□□□□□ -1.9
PCDHGA12O60330 AL590556.1-201ENST00000423231 483 ntBASIC3.21□□□□□ -1.9
PCDHGA12O60330 AIMP1P2-201ENST00000425294 312 ntBASIC3.21□□□□□ -1.9
PCDHGA12O60330 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDHGA12O60330 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.21□□□□□ -1.9
PCDHGA12O60330 RN7SL863P-201ENST00000462370 296 ntBASIC3.21□□□□□ -1.9
PCDHGA12O60330 RPL23AP67-201ENST00000465341 474 ntBASIC3.21□□□□□ -1.9
PCDHGA12O60330 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC3.21□□□□□ -1.9
PCDHGA12O60330 AL670379.2-201ENST00000604983 252 ntBASIC3.21□□□□□ -1.9
PCDHGA12O60330 AC006157.1-201ENST00000611750 366 ntBASIC3.21□□□□□ -1.9
PCDHGA12O60330 AC099654.10-201ENST00000640395 161 ntBASIC3.21□□□□□ -1.9
PCDHGA12O60330 PHF6-205ENST00000625464 4434 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
PCDHGA12O60330 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.21□□□□□ -1.9
PCDHGA12O60330 RNU5F-3P-201ENST00000363767 117 ntBASIC3.2□□□□□ -1.9
PCDHGA12O60330 SNORA33.2-201ENST00000365413 134 ntBASIC3.2□□□□□ -1.9
PCDHGA12O60330 RNU6-639P-201ENST00000384074 107 ntBASIC3.2□□□□□ -1.9
PCDHGA12O60330 RNU6-17P-201ENST00000384245 107 ntBASIC3.2□□□□□ -1.9
PCDHGA12O60330 RNU6-18P-201ENST00000384527 107 ntBASIC3.2□□□□□ -1.9
PCDHGA12O60330 SNORA44-201ENST00000384584 132 ntBASIC3.2□□□□□ -1.9
PCDHGA12O60330 SNORA69.1-201ENST00000390904 137 ntBASIC3.2□□□□□ -1.9
PCDHGA12O60330 Y_RNA.605-201ENST00000410577 105 ntBASIC3.2□□□□□ -1.9
PCDHGA12O60330 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.2□□□□□ -1.9
PCDHGA12O60330 EIF4EP4-201ENST00000424916 578 ntBASIC3.2□□□□□ -1.9
PCDHGA12O60330 RPL23AP22-201ENST00000437556 453 ntBASIC3.2□□□□□ -1.9
PCDHGA12O60330 AC107083.1-201ENST00000439643 279 ntBASIC3.2□□□□□ -1.9
PCDHGA12O60330 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC3.2□□□□□ -1.9
PCDHGA12O60330 MTND4P19-201ENST00000446659 478 ntBASIC3.2□□□□□ -1.9
PCDHGA12O60330 OR2AQ1P-201ENST00000451972 200 ntBASIC3.2□□□□□ -1.9
PCDHGA12O60330 RPS3P1-201ENST00000456781 192 ntBASIC3.2□□□□□ -1.9
PCDHGA12O60330 HMGN1P18-201ENST00000457642 277 ntBASIC3.2□□□□□ -1.9
PCDHGA12O60330 AL121594.1-201ENST00000475906 575 ntBASIC3.2□□□□□ -1.9
PCDHGA12O60330 RNU6-911P-201ENST00000516523 104 ntBASIC3.2□□□□□ -1.9
PCDHGA12O60330 SCARNA3-201ENST00000517097 143 ntBASIC3.2□□□□□ -1.9
PCDHGA12O60330 RNU4ATAC17P-201ENST00000517272 120 ntBASIC3.2□□□□□ -1.9
PCDHGA12O60330 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.2□□□□□ -1.9
PCDHGA12O60330 MIR3616-201ENST00000584070 92 ntBASIC3.2□□□□□ -1.9
PCDHGA12O60330 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC3.2□□□□□ -1.9
PCDHGA12O60330 AC092447.9-201ENST00000603395 144 ntBASIC3.2□□□□□ -1.9
PCDHGA12O60330 Z98751.3-201ENST00000604447 521 ntBASIC3.2□□□□□ -1.9
PCDHGA12O60330 AL034555.1-201ENST00000604816 211 ntBASIC3.2□□□□□ -1.9
PCDHGA12O60330 AC016925.2-201ENST00000605108 242 ntBASIC3.2□□□□□ -1.9
PCDHGA12O60330 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.2□□□□□ -1.9
PCDHGA12O60330 AC018692.3-201ENST00000623929 123 ntBASIC3.2□□□□□ -1.9
PCDHGA12O60330 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.2□□□□□ -1.9
PCDHGA12O60330 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
PCDHGA12O60330 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
PCDHGA12O60330 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDHGA12O60330 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
PCDHGA12O60330 Y_RNA.31-201ENST00000362574 102 ntBASIC3.19□□□□□ -1.9
PCDHGA12O60330 Y_RNA.80-201ENST00000362996 102 ntBASIC3.19□□□□□ -1.9
PCDHGA12O60330 Y_RNA.364-201ENST00000365532 101 ntBASIC3.19□□□□□ -1.9
PCDHGA12O60330 SNORA22B-201ENST00000383876 138 ntBASIC3.19□□□□□ -1.9
PCDHGA12O60330 SNORA48.8-201ENST00000391324 134 ntBASIC3.19□□□□□ -1.9
PCDHGA12O60330 AC126124.2-201ENST00000413542 321 ntBASIC3.19□□□□□ -1.9
PCDHGA12O60330 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDHGA12O60330 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDHGA12O60330 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDHGA12O60330 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.19□□□□□ -1.9
PCDHGA12O60330 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDHGA12O60330 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC3.19□□□□□ -1.9
PCDHGA12O60330 RPS27P29-201ENST00000463110 252 ntBASIC3.19□□□□□ -1.9
PCDHGA12O60330 CENPBD1P1-201ENST00000464061 469 ntBASIC3.19□□□□□ -1.9
PCDHGA12O60330 RNU6-120P-201ENST00000516077 103 ntBASIC3.19□□□□□ -1.9
PCDHGA12O60330 RNA5SP54-201ENST00000516951 92 ntBASIC3.19□□□□□ -1.9
PCDHGA12O60330 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.19□□□□□ -1.9
PCDHGA12O60330 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
PCDHGA12O60330 CBX3P7-201ENST00000532876 502 ntBASIC3.19□□□□□ -1.9
PCDHGA12O60330 AC022080.3-201ENST00000544433 482 ntBASIC3.19□□□□□ -1.9
PCDHGA12O60330 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.19□□□□□ -1.9
PCDHGA12O60330 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDHGA12O60330 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.19□□□□□ -1.9
PCDHGA12O60330 MIR7106-201ENST00000612419 65 ntBASIC3.19□□□□□ -1.9
PCDHGA12O60330 AC005520.5-201ENST00000613926 164 ntBASIC3.19□□□□□ -1.9
PCDHGA12O60330 Clostridiales-1.2-201ENST00000636724 160 ntBASIC3.19□□□□□ -1.9
PCDHGA12O60330 AL450472.1-202ENST00000637286 180 ntBASIC3.19□□□□□ -1.9
PCDHGA12O60330 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
PCDHGA12O60330 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
PCDHGA12O60330 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PCDHGA12O60330 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PCDHGA12O60330 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PCDHGA12O60330 AC138915.1-201ENST00000565427 1685 ntBASIC3.18□□□□□ -1.9
PCDHGA12O60330 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.18□□□□□ -1.9
PCDHGA12O60330 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.18□□□□□ -1.9
PCDHGA12O60330 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PCDHGA12O60330 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.18□□□□□ -1.9
PCDHGA12O60330 RNY1P14-201ENST00000384426 108 ntBASIC3.18□□□□□ -1.9
PCDHGA12O60330 Y_RNA.526-201ENST00000384572 110 ntBASIC3.18□□□□□ -1.9
PCDHGA12O60330 RNU6-541P-201ENST00000384709 110 ntBASIC3.18□□□□□ -1.9
PCDHGA12O60330 MIR32-201ENST00000384965 70 ntBASIC3.18□□□□□ -1.9
PCDHGA12O60330 MIR320B2-201ENST00000408479 138 ntBASIC3.18□□□□□ -1.9
PCDHGA12O60330 MTCO3P19-201ENST00000415864 321 ntBASIC3.18□□□□□ -1.9
PCDHGA12O60330 RPL23AP58-201ENST00000440453 469 ntBASIC3.18□□□□□ -1.9
PCDHGA12O60330 AF186996.7-201ENST00000492781 209 ntBASIC3.18□□□□□ -1.9
PCDHGA12O60330 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.18□□□□□ -1.9
PCDHGA12O60330 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC3.18□□□□□ -1.9
PCDHGA12O60330 SNORA64.4-201ENST00000516632 81 ntBASIC3.18□□□□□ -1.9
PCDHGA12O60330 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms