Protein–RNA interactions for Protein: O15116

LSM1, U6 snRNA-associated Sm-like protein LSm1, humanhuman

Known RBP Predictions only

Length 133 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1O15116 AL513185.2-201ENST00000425543 193 ntBASIC1.36□□□□□ -2.19
LSM1O15116 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC1.36□□□□□ -2.19
LSM1O15116 MTND5P25-201ENST00000430499 799 ntBASIC1.36□□□□□ -2.19
LSM1O15116 AC099677.2-201ENST00000436385 175 ntBASIC1.36□□□□□ -2.19
LSM1O15116 AC016700.2-201ENST00000446011 156 ntBASIC1.36□□□□□ -2.19
LSM1O15116 AC015983.2-201ENST00000446053 472 ntTSL 3 BASIC1.36□□□□□ -2.19
LSM1O15116 SNORD13-201ENST00000459299 104 ntBASIC1.36□□□□□ -2.19
LSM1O15116 AC099513.1-201ENST00000490423 301 ntBASIC1.36□□□□□ -2.19
LSM1O15116 AC015911.1-201ENST00000495111 156 ntBASIC1.36□□□□□ -2.19
LSM1O15116 NAF1-205ENST00000509434 385 ntTSL 3 BASIC1.36□□□□□ -2.19
LSM1O15116 MTCO3P7-201ENST00000510008 774 ntBASIC1.36□□□□□ -2.19
LSM1O15116 MTND1P22-201ENST00000510572 951 ntBASIC1.36□□□□□ -2.19
LSM1O15116 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC1.36□□□□□ -2.19
LSM1O15116 RNA5SP445-201ENST00000515889 115 ntBASIC1.36□□□□□ -2.19
LSM1O15116 RNU6-902P-201ENST00000517212 91 ntBASIC1.36□□□□□ -2.19
LSM1O15116 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC1.36□□□□□ -2.19
LSM1O15116 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC1.36□□□□□ -2.19
LSM1O15116 RRN3P3-201ENST00000549207 578 ntBASIC1.36□□□□□ -2.19
LSM1O15116 MIR5094-201ENST00000578766 85 ntBASIC1.36□□□□□ -2.19
LSM1O15116 MIR3682-201ENST00000581338 84 ntBASIC1.36□□□□□ -2.19
LSM1O15116 AL590229.1-201ENST00000603497 542 ntBASIC1.36□□□□□ -2.19
LSM1O15116 PCGEM1.1-201ENST00000613431 131 ntBASIC1.36□□□□□ -2.19
LSM1O15116 AC079248.2-201ENST00000623779 326 ntBASIC1.36□□□□□ -2.19
LSM1O15116 U6.114-201ENST00000636407 96 ntBASIC1.36□□□□□ -2.19
LSM1O15116 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
LSM1O15116 AC025539.1-201ENST00000515343 4019 ntTSL 2 BASIC1.35□□□□□ -2.19
LSM1O15116 SNORA32.2-201ENST00000384049 122 ntBASIC1.35□□□□□ -2.19
LSM1O15116 AL031577.2-201ENST00000404133 280 ntBASIC1.35□□□□□ -2.19
LSM1O15116 RNU4-46P-201ENST00000410818 138 ntBASIC1.35□□□□□ -2.19
LSM1O15116 RNU6-195P-201ENST00000411352 109 ntBASIC1.35□□□□□ -2.19
LSM1O15116 MTCO2P34-201ENST00000421994 607 ntBASIC1.35□□□□□ -2.19
LSM1O15116 AC139712.2-201ENST00000424302 339 ntBASIC1.35□□□□□ -2.19
LSM1O15116 AC245047.4-201ENST00000433189 144 ntBASIC1.35□□□□□ -2.19
LSM1O15116 AC015922.2-201ENST00000435593 184 ntBASIC1.35□□□□□ -2.19
LSM1O15116 ZNF736P12Y-201ENST00000443152 1243 ntBASIC1.35□□□□□ -2.19
LSM1O15116 RPS27AP8-201ENST00000452665 445 ntBASIC1.35□□□□□ -2.19
LSM1O15116 RNU7-182P-201ENST00000459009 62 ntBASIC1.35□□□□□ -2.19
LSM1O15116 TOMM22P6-201ENST00000465035 409 ntBASIC1.35□□□□□ -2.19
LSM1O15116 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC1.35□□□□□ -2.19
LSM1O15116 AC108078.1-201ENST00000508073 725 ntBASIC1.35□□□□□ -2.19
LSM1O15116 LRRC34P2-201ENST00000514850 553 ntBASIC1.35□□□□□ -2.19
LSM1O15116 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC1.35□□□□□ -2.19
LSM1O15116 RNU2-69P-201ENST00000516061 100 ntBASIC1.35□□□□□ -2.19
LSM1O15116 RN7SKP265-201ENST00000516448 223 ntBASIC1.35□□□□□ -2.19
LSM1O15116 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC1.35□□□□□ -2.19
LSM1O15116 AC092138.2-201ENST00000563811 428 ntTSL 5 BASIC1.35□□□□□ -2.19
LSM1O15116 AC015720.1-201ENST00000565251 277 ntBASIC1.35□□□□□ -2.19
LSM1O15116 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC1.35□□□□□ -2.19
LSM1O15116 AC234772.3-201ENST00000602277 528 ntBASIC1.35□□□□□ -2.19
LSM1O15116 AL645939.4-201ENST00000604495 135 ntBASIC1.35□□□□□ -2.19
LSM1O15116 Z99289.3-201ENST00000605586 594 ntBASIC1.35□□□□□ -2.19
LSM1O15116 AC005858.4-201ENST00000623191 700 ntBASIC1.35□□□□□ -2.19
LSM1O15116 AC068787.1-201ENST00000623908 691 ntBASIC1.35□□□□□ -2.19
LSM1O15116 AC233981.2-201ENST00000611524 1614 ntBASIC1.35□□□□□ -2.19
LSM1O15116 OR4C11-202ENST00000641580 2737 ntAPPRIS P1 BASIC1.35□□□□□ -2.19
LSM1O15116 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC1.34□□□□□ -2.19
LSM1O15116 AC092268.1-201ENST00000342691 405 ntBASIC1.34□□□□□ -2.19
LSM1O15116 RNY4P34-201ENST00000364779 95 ntBASIC1.34□□□□□ -2.19
LSM1O15116 RNU6-1029P-201ENST00000384109 107 ntBASIC1.34□□□□□ -2.19
LSM1O15116 RNU2-41P-201ENST00000410991 178 ntBASIC1.34□□□□□ -2.19
LSM1O15116 AL161935.2-201ENST00000414627 60 ntBASIC1.34□□□□□ -2.19
LSM1O15116 MTCO3P41-201ENST00000414801 328 ntBASIC1.34□□□□□ -2.19
LSM1O15116 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.34□□□□□ -2.19
LSM1O15116 JTBP1-201ENST00000441314 247 ntBASIC1.34□□□□□ -2.19
LSM1O15116 SNRPEP8-201ENST00000442866 260 ntBASIC1.34□□□□□ -2.19
LSM1O15116 AC016925.1-201ENST00000458303 298 ntBASIC1.34□□□□□ -2.19
LSM1O15116 RPS26P55-201ENST00000471178 356 ntBASIC1.34□□□□□ -2.19
LSM1O15116 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC1.34□□□□□ -2.19
LSM1O15116 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.34□□□□□ -2.19
LSM1O15116 AC078795.3-201ENST00000602913 472 ntBASIC1.34□□□□□ -2.19
LSM1O15116 AP001596.2-201ENST00000608410 312 ntBASIC1.34□□□□□ -2.19
LSM1O15116 AC005520.5-201ENST00000613926 164 ntBASIC1.34□□□□□ -2.19
LSM1O15116 ST7-OT4_2.1-201ENST00000619089 172 ntBASIC1.34□□□□□ -2.19
LSM1O15116 uc_338.11-201ENST00000619132 160 ntBASIC1.34□□□□□ -2.19
LSM1O15116 SEPT14P19-203ENST00000633205 211 ntBASIC1.34□□□□□ -2.19
LSM1O15116 AC091812.1-201ENST00000432235 1948 ntBASIC1.34□□□□□ -2.2
LSM1O15116 AC245060.5-201ENST00000610778 3293 ntBASIC1.34□□□□□ -2.2
LSM1O15116 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
LSM1O15116 RNU1-76P-201ENST00000362903 159 ntBASIC1.33□□□□□ -2.2
LSM1O15116 RNU6-553P-201ENST00000364047 96 ntBASIC1.33□□□□□ -2.2
LSM1O15116 SNORD31B-201ENST00000364977 69 ntBASIC1.33□□□□□ -2.2
LSM1O15116 Y_RNA.480-201ENST00000384364 102 ntBASIC1.33□□□□□ -2.2
LSM1O15116 RNU6-1127P-201ENST00000384580 107 ntBASIC1.33□□□□□ -2.2
LSM1O15116 MIR1-2-201ENST00000384961 85 ntBASIC1.33□□□□□ -2.2
LSM1O15116 RNU6-360P-201ENST00000390944 104 ntBASIC1.33□□□□□ -2.2
LSM1O15116 SNORA16.2-201ENST00000390991 127 ntBASIC1.33□□□□□ -2.2
LSM1O15116 HMGN1P14-201ENST00000412459 517 ntBASIC1.33□□□□□ -2.2
LSM1O15116 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC1.33□□□□□ -2.2
LSM1O15116 AC013410.2-201ENST00000422627 201 ntBASIC1.33□□□□□ -2.2
LSM1O15116 SNRPGP13-201ENST00000442212 177 ntBASIC1.33□□□□□ -2.2
LSM1O15116 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC1.33□□□□□ -2.2
LSM1O15116 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC1.33□□□□□ -2.2
LSM1O15116 AC079382.1-201ENST00000493346 557 ntBASIC1.33□□□□□ -2.2
LSM1O15116 RNA5SP437-201ENST00000517249 129 ntBASIC1.33□□□□□ -2.2
LSM1O15116 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC1.33□□□□□ -2.2
LSM1O15116 AC109446.1-201ENST00000566172 220 ntBASIC1.33□□□□□ -2.2
LSM1O15116 MIR4703-201ENST00000577728 79 ntBASIC1.33□□□□□ -2.2
LSM1O15116 MIR3923-201ENST00000579521 83 ntBASIC1.33□□□□□ -2.2
LSM1O15116 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
LSM1O15116 AC136475.10-201ENST00000620253 385 ntBASIC1.33□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 122 ms