Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 AMD1P1-201ENST00000457220 922 ntBASIC2.24□□□□□ -2.05
CLDN4O14493 RPL9P9-202ENST00000466501 579 ntBASIC2.24□□□□□ -2.05
CLDN4O14493 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.24□□□□□ -2.05
CLDN4O14493 AC015911.1-201ENST00000495111 156 ntBASIC2.24□□□□□ -2.05
CLDN4O14493 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC2.24□□□□□ -2.05
CLDN4O14493 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.24□□□□□ -2.05
CLDN4O14493 AC107222.1-201ENST00000510899 637 ntBASIC2.24□□□□□ -2.05
CLDN4O14493 RN7SKP256-201ENST00000517201 314 ntBASIC2.24□□□□□ -2.05
CLDN4O14493 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.24□□□□□ -2.05
CLDN4O14493 AC026371.1-201ENST00000551867 419 ntBASIC2.24□□□□□ -2.05
CLDN4O14493 AC007375.1-201ENST00000554513 578 ntBASIC2.24□□□□□ -2.05
CLDN4O14493 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC2.24□□□□□ -2.05
CLDN4O14493 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.24□□□□□ -2.05
CLDN4O14493 AL356157.2-201ENST00000605122 111 ntBASIC2.24□□□□□ -2.05
CLDN4O14493 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC2.24□□□□□ -2.05
CLDN4O14493 AC067747.1-201ENST00000608026 250 ntBASIC2.24□□□□□ -2.05
CLDN4O14493 AL137847.3-201ENST00000611521 109 ntBASIC2.24□□□□□ -2.05
CLDN4O14493 MIR6840-201ENST00000611937 71 ntBASIC2.24□□□□□ -2.05
CLDN4O14493 AC100810.6-201ENST00000638068 285 ntBASIC2.24□□□□□ -2.05
CLDN4O14493 AP000560.1-201ENST00000624150 1937 ntBASIC2.23□□□□□ -2.05
CLDN4O14493 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
CLDN4O14493 RNU6-1317P-201ENST00000364582 104 ntBASIC2.23□□□□□ -2.05
CLDN4O14493 SNORA25B-201ENST00000365507 128 ntBASIC2.23□□□□□ -2.05
CLDN4O14493 Y_RNA.505-201ENST00000384489 102 ntBASIC2.23□□□□□ -2.05
CLDN4O14493 MIR1277-201ENST00000408536 78 ntBASIC2.23□□□□□ -2.05
CLDN4O14493 RNA5SP425-201ENST00000410336 112 ntBASIC2.23□□□□□ -2.05
CLDN4O14493 RN7SKP61-201ENST00000410642 295 ntBASIC2.23□□□□□ -2.05
CLDN4O14493 Y_RNA.619-201ENST00000410951 90 ntBASIC2.23□□□□□ -2.05
CLDN4O14493 AL135786.1-201ENST00000415892 214 ntBASIC2.23□□□□□ -2.05
CLDN4O14493 MTND1P23-201ENST00000416931 372 ntBASIC2.23□□□□□ -2.05
CLDN4O14493 UBE2V1P4-201ENST00000425374 344 ntBASIC2.23□□□□□ -2.05
CLDN4O14493 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC2.23□□□□□ -2.05
CLDN4O14493 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC2.23□□□□□ -2.05
CLDN4O14493 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.23□□□□□ -2.05
CLDN4O14493 RNU7-66P-201ENST00000459469 62 ntBASIC2.23□□□□□ -2.05
CLDN4O14493 U8.21-201ENST00000459536 136 ntBASIC2.23□□□□□ -2.05
CLDN4O14493 AC018868.1-201ENST00000491307 315 ntBASIC2.23□□□□□ -2.05
CLDN4O14493 AC022447.4-201ENST00000504053 364 ntBASIC2.23□□□□□ -2.05
CLDN4O14493 FAM206BP-201ENST00000510179 541 ntBASIC2.23□□□□□ -2.05
CLDN4O14493 AC025465.4-201ENST00000513422 638 ntBASIC2.23□□□□□ -2.05
CLDN4O14493 SNORA4.4-201ENST00000515921 135 ntBASIC2.23□□□□□ -2.05
CLDN4O14493 SNORA31.16-201ENST00000516773 139 ntBASIC2.23□□□□□ -2.05
CLDN4O14493 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC2.23□□□□□ -2.05
CLDN4O14493 CYCSP26-201ENST00000534107 320 ntBASIC2.23□□□□□ -2.05
CLDN4O14493 AC100830.2-201ENST00000581636 240 ntBASIC2.23□□□□□ -2.05
CLDN4O14493 MIR3136-201ENST00000583498 78 ntBASIC2.23□□□□□ -2.05
CLDN4O14493 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC2.23□□□□□ -2.05
CLDN4O14493 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC2.23□□□□□ -2.05
CLDN4O14493 AP000907.4-201ENST00000604143 237 ntBASIC2.23□□□□□ -2.05
CLDN4O14493 AC103810.6-201ENST00000606708 136 ntBASIC2.23□□□□□ -2.05
CLDN4O14493 AC007014.2-201ENST00000615581 479 ntBASIC2.23□□□□□ -2.05
CLDN4O14493 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CLDN4O14493 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
CLDN4O14493 AC069528.2-201ENST00000624849 1991 ntBASIC2.22□□□□□ -2.05
CLDN4O14493 SNORA3A-201ENST00000364113 130 ntBASIC2.22□□□□□ -2.05
CLDN4O14493 U8.8-201ENST00000365399 135 ntBASIC2.22□□□□□ -2.05
CLDN4O14493 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CLDN4O14493 RNU6-128P-201ENST00000383976 107 ntBASIC2.22□□□□□ -2.05
CLDN4O14493 Y_RNA.504-201ENST00000384481 104 ntBASIC2.22□□□□□ -2.05
CLDN4O14493 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
CLDN4O14493 BTF3L4P2-201ENST00000392798 346 ntBASIC2.22□□□□□ -2.05
CLDN4O14493 RNA5SP118-201ENST00000410385 109 ntBASIC2.22□□□□□ -2.05
CLDN4O14493 Y_RNA.597-201ENST00000410463 100 ntBASIC2.22□□□□□ -2.05
CLDN4O14493 RNU6-325P-201ENST00000411132 105 ntBASIC2.22□□□□□ -2.05
CLDN4O14493 RNU2-32P-201ENST00000411193 191 ntBASIC2.22□□□□□ -2.05
CLDN4O14493 VN1R36P-201ENST00000414936 291 ntBASIC2.22□□□□□ -2.05
CLDN4O14493 Z98742.3-201ENST00000418637 326 ntBASIC2.22□□□□□ -2.05
CLDN4O14493 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.22□□□□□ -2.05
CLDN4O14493 MTND3P9-201ENST00000429526 346 ntBASIC2.22□□□□□ -2.05
CLDN4O14493 AL133396.1-201ENST00000432048 687 ntBASIC2.22□□□□□ -2.05
CLDN4O14493 IPO7P1-201ENST00000442031 636 ntBASIC2.22□□□□□ -2.05
CLDN4O14493 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.22□□□□□ -2.05
CLDN4O14493 RPS29P25-201ENST00000481709 171 ntBASIC2.22□□□□□ -2.05
CLDN4O14493 RPS29P21-201ENST00000496272 170 ntBASIC2.22□□□□□ -2.05
CLDN4O14493 TRBVA-201ENST00000498804 316 ntBASIC2.22□□□□□ -2.05
CLDN4O14493 AC016632.1-201ENST00000503994 196 ntBASIC2.22□□□□□ -2.05
CLDN4O14493 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC2.22□□□□□ -2.05
CLDN4O14493 SCOCP1-201ENST00000554676 349 ntBASIC2.22□□□□□ -2.05
CLDN4O14493 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.22□□□□□ -2.05
CLDN4O14493 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.22□□□□□ -2.05
CLDN4O14493 AC018889.1-201ENST00000605372 397 ntBASIC2.22□□□□□ -2.05
CLDN4O14493 AC009541.1-201ENST00000438279 2662 ntBASIC2.22□□□□□ -2.05
CLDN4O14493 AC092268.1-201ENST00000342691 405 ntBASIC2.21□□□□□ -2.06
CLDN4O14493 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.21□□□□□ -2.06
CLDN4O14493 RNU6-227P-201ENST00000362865 103 ntBASIC2.21□□□□□ -2.06
CLDN4O14493 Y_RNA.157-201ENST00000363638 102 ntBASIC2.21□□□□□ -2.06
CLDN4O14493 RNU4-56P-201ENST00000364700 142 ntBASIC2.21□□□□□ -2.06
CLDN4O14493 RNU6-546P-201ENST00000383991 107 ntBASIC2.21□□□□□ -2.06
CLDN4O14493 Y_RNA.414-201ENST00000384011 101 ntBASIC2.21□□□□□ -2.06
CLDN4O14493 RNU4-53P-201ENST00000410828 140 ntBASIC2.21□□□□□ -2.06
CLDN4O14493 AC009161.1-201ENST00000417306 376 ntBASIC2.21□□□□□ -2.06
CLDN4O14493 AC078809.1-201ENST00000427601 140 ntBASIC2.21□□□□□ -2.06
CLDN4O14493 MTCO3P18-201ENST00000440206 761 ntBASIC2.21□□□□□ -2.06
CLDN4O14493 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.21□□□□□ -2.06
CLDN4O14493 IFNA11P-201ENST00000446352 526 ntBASIC2.21□□□□□ -2.06
CLDN4O14493 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.21□□□□□ -2.06
CLDN4O14493 snoU13.23-201ENST00000458863 104 ntBASIC2.21□□□□□ -2.06
CLDN4O14493 RPS27P27-201ENST00000498779 255 ntBASIC2.21□□□□□ -2.06
CLDN4O14493 RNU6-965P-201ENST00000516721 96 ntBASIC2.21□□□□□ -2.06
CLDN4O14493 RNU6-667P-201ENST00000517186 102 ntBASIC2.21□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 82 ms