Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AC116165.2-201ENST00000616705 206 ntBASIC0.11□□□□□ -2.39
TCRBV3S1A0A5B6 RMST_7.1-201ENST00000621935 268 ntBASIC0.11□□□□□ -2.39
TCRBV3S1A0A5B6 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC0.11□□□□□ -2.39
TCRBV3S1A0A5B6 MIRLET7D-201ENST00000362263 87 ntBASIC0.1□□□□□ -2.39
TCRBV3S1A0A5B6 RNU6-349P-201ENST00000362402 107 ntBASIC0.1□□□□□ -2.39
TCRBV3S1A0A5B6 RNY1P10-201ENST00000363268 113 ntBASIC0.1□□□□□ -2.39
TCRBV3S1A0A5B6 RNU6-384P-201ENST00000364900 104 ntBASIC0.1□□□□□ -2.39
TCRBV3S1A0A5B6 SNORD31B-201ENST00000364977 69 ntBASIC0.1□□□□□ -2.39
TCRBV3S1A0A5B6 RNU6-354P-201ENST00000383862 107 ntBASIC0.1□□□□□ -2.39
TCRBV3S1A0A5B6 RNU6-610P-201ENST00000384264 107 ntBASIC0.1□□□□□ -2.39
TCRBV3S1A0A5B6 RPS3AP36-201ENST00000398190 775 ntBASIC0.1□□□□□ -2.39
TCRBV3S1A0A5B6 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC0.1□□□□□ -2.39
TCRBV3S1A0A5B6 C1DP2-201ENST00000418167 426 ntBASIC0.1□□□□□ -2.39
TCRBV3S1A0A5B6 MRPS36P1-201ENST00000421291 307 ntBASIC0.1□□□□□ -2.39
TCRBV3S1A0A5B6 AC073614.1-201ENST00000438690 650 ntBASIC0.1□□□□□ -2.39
TCRBV3S1A0A5B6 RPEP5-201ENST00000441137 268 ntBASIC0.1□□□□□ -2.39
TCRBV3S1A0A5B6 DAP3P1-201ENST00000441522 278 ntBASIC0.1□□□□□ -2.39
TCRBV3S1A0A5B6 AL353718.1-201ENST00000451028 517 ntBASIC0.1□□□□□ -2.39
TCRBV3S1A0A5B6 C1DP4-201ENST00000455429 424 ntBASIC0.1□□□□□ -2.39
TCRBV3S1A0A5B6 TPRKBP1-201ENST00000456243 481 ntBASIC0.1□□□□□ -2.39
TCRBV3S1A0A5B6 AL162395.1-201ENST00000457882 422 ntBASIC0.1□□□□□ -2.39
TCRBV3S1A0A5B6 RPS29P1-201ENST00000465274 159 ntBASIC0.1□□□□□ -2.39
TCRBV3S1A0A5B6 WDR78-207ENST00000488333 613 ntTSL 3 BASIC0.1□□□□□ -2.39
TCRBV3S1A0A5B6 HMGN1P12-201ENST00000499125 195 ntBASIC0.1□□□□□ -2.39
TCRBV3S1A0A5B6 AC112206.3-201ENST00000514578 389 ntBASIC0.1□□□□□ -2.39
TCRBV3S1A0A5B6 AC027338.1-201ENST00000514840 825 ntBASIC0.1□□□□□ -2.39
TCRBV3S1A0A5B6 MIR3912-201ENST00000577566 105 ntBASIC0.1□□□□□ -2.39
TCRBV3S1A0A5B6 AL034555.1-201ENST00000604816 211 ntBASIC0.1□□□□□ -2.39
TCRBV3S1A0A5B6 AL353149.1-201ENST00000610667 244 ntBASIC0.1□□□□□ -2.39
TCRBV3S1A0A5B6 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.1□□□□□ -2.39
TCRBV3S1A0A5B6 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC0.09□□□□□ -2.39
TCRBV3S1A0A5B6 AC090625.1-201ENST00000357130 210 ntBASIC0.09□□□□□ -2.4
TCRBV3S1A0A5B6 SNORA33-201ENST00000363664 130 ntBASIC0.09□□□□□ -2.4
TCRBV3S1A0A5B6 RNU6-505P-201ENST00000384427 107 ntBASIC0.09□□□□□ -2.4
TCRBV3S1A0A5B6 RNU6-950P-201ENST00000384651 107 ntBASIC0.09□□□□□ -2.4
TCRBV3S1A0A5B6 TRAJ41-201ENST00000390496 62 ntAPPRIS P1 BASIC0.09□□□□□ -2.4
TCRBV3S1A0A5B6 RNU6-278P-201ENST00000390945 109 ntBASIC0.09□□□□□ -2.4
TCRBV3S1A0A5B6 RNA5SP299-201ENST00000391203 116 ntBASIC0.09□□□□□ -2.4
TCRBV3S1A0A5B6 MIR1295A-201ENST00000408463 79 ntBASIC0.09□□□□□ -2.4
TCRBV3S1A0A5B6 TIMM9P2-201ENST00000419324 266 ntBASIC0.09□□□□□ -2.4
TCRBV3S1A0A5B6 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC0.09□□□□□ -2.4
TCRBV3S1A0A5B6 MTCO1P27-201ENST00000448269 226 ntBASIC0.09□□□□□ -2.4
TCRBV3S1A0A5B6 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC0.09□□□□□ -2.4
TCRBV3S1A0A5B6 MTCYBP1-201ENST00000454315 1119 ntBASIC0.09□□□□□ -2.4
TCRBV3S1A0A5B6 AC093899.1-201ENST00000457984 376 ntBASIC0.09□□□□□ -2.4
TCRBV3S1A0A5B6 AC104806.1-201ENST00000508720 308 ntBASIC0.09□□□□□ -2.4
TCRBV3S1A0A5B6 MTND3P5-201ENST00000512798 333 ntBASIC0.09□□□□□ -2.4
TCRBV3S1A0A5B6 FABP5P5-201ENST00000515537 406 ntBASIC0.09□□□□□ -2.4
TCRBV3S1A0A5B6 AC021231.3-201ENST00000558497 370 ntBASIC0.09□□□□□ -2.4
TCRBV3S1A0A5B6 MIR4781-201ENST00000585250 76 ntBASIC0.09□□□□□ -2.4
TCRBV3S1A0A5B6 AL929325.1-201ENST00000603096 117 ntBASIC0.09□□□□□ -2.4
TCRBV3S1A0A5B6 PRELID3BP2-201ENST00000605362 201 ntBASIC0.09□□□□□ -2.4
TCRBV3S1A0A5B6 GHRLOS.1-201ENST00000610995 70 ntBASIC0.09□□□□□ -2.4
TCRBV3S1A0A5B6 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC0.09□□□□□ -2.4
TCRBV3S1A0A5B6 AC024940.5-201ENST00000622889 474 ntBASIC0.09□□□□□ -2.4
TCRBV3S1A0A5B6 MIR338-201ENST00000636369 67 ntBASIC0.09□□□□□ -2.4
TCRBV3S1A0A5B6 RNU5A-8P-201ENST00000364102 114 ntBASIC0.08□□□□□ -2.4
TCRBV3S1A0A5B6 SNORD41-201ENST00000386967 70 ntBASIC0.08□□□□□ -2.4
TCRBV3S1A0A5B6 SNORA75.2-201ENST00000391138 150 ntBASIC0.08□□□□□ -2.4
TCRBV3S1A0A5B6 SNORA75.3-201ENST00000391231 150 ntBASIC0.08□□□□□ -2.4
TCRBV3S1A0A5B6 RPL21P1-201ENST00000399532 476 ntBASIC0.08□□□□□ -2.4
TCRBV3S1A0A5B6 MTCYBP2-201ENST00000407745 171 ntBASIC0.08□□□□□ -2.4
TCRBV3S1A0A5B6 MTCO1P17-201ENST00000411522 491 ntBASIC0.08□□□□□ -2.4
TCRBV3S1A0A5B6 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC0.08□□□□□ -2.4
TCRBV3S1A0A5B6 FABP5P4-201ENST00000437203 171 ntBASIC0.08□□□□□ -2.4
TCRBV3S1A0A5B6 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.08□□□□□ -2.4
TCRBV3S1A0A5B6 AL606662.1-201ENST00000445763 553 ntBASIC0.08□□□□□ -2.4
TCRBV3S1A0A5B6 AC022493.2-201ENST00000506122 481 ntBASIC0.08□□□□□ -2.4
TCRBV3S1A0A5B6 AC011406.1-201ENST00000512440 370 ntBASIC0.08□□□□□ -2.4
TCRBV3S1A0A5B6 RNU6-1098P-201ENST00000516772 96 ntBASIC0.08□□□□□ -2.4
TCRBV3S1A0A5B6 RNU6-677P-201ENST00000516914 101 ntBASIC0.08□□□□□ -2.4
TCRBV3S1A0A5B6 RNU6-856P-201ENST00000516959 98 ntBASIC0.08□□□□□ -2.4
TCRBV3S1A0A5B6 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.08□□□□□ -2.4
TCRBV3S1A0A5B6 AL353778.1-201ENST00000603149 408 ntBASIC0.08□□□□□ -2.4
TCRBV3S1A0A5B6 AL360219.1-201ENST00000610230 366 ntBASIC0.08□□□□□ -2.4
TCRBV3S1A0A5B6 CASC19-280ENST00000642102 1351 ntBASIC0.07□□□□□ -2.4
TCRBV3S1A0A5B6 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC0.07□□□□□ -2.4
TCRBV3S1A0A5B6 SNORD114-22-201ENST00000365423 72 ntBASIC0.07□□□□□ -2.4
TCRBV3S1A0A5B6 MIR544A-201ENST00000384855 91 ntBASIC0.07□□□□□ -2.4
TCRBV3S1A0A5B6 RPL22P18-201ENST00000417197 377 ntBASIC0.07□□□□□ -2.4
TCRBV3S1A0A5B6 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC0.07□□□□□ -2.4
TCRBV3S1A0A5B6 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC0.07□□□□□ -2.4
TCRBV3S1A0A5B6 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC0.07□□□□□ -2.4
TCRBV3S1A0A5B6 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC0.07□□□□□ -2.4
TCRBV3S1A0A5B6 AC007395.1-201ENST00000451333 677 ntBASIC0.07□□□□□ -2.4
TCRBV3S1A0A5B6 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC0.07□□□□□ -2.4
TCRBV3S1A0A5B6 RNU7-90P-201ENST00000459216 62 ntBASIC0.07□□□□□ -2.4
TCRBV3S1A0A5B6 AL049830.1-201ENST00000468034 425 ntBASIC0.07□□□□□ -2.4
TCRBV3S1A0A5B6 SNORA31.10-201ENST00000516482 106 ntBASIC0.07□□□□□ -2.4
TCRBV3S1A0A5B6 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC0.07□□□□□ -2.4
TCRBV3S1A0A5B6 AC109446.1-201ENST00000566172 220 ntBASIC0.07□□□□□ -2.4
TCRBV3S1A0A5B6 AL512347.1-201ENST00000566420 503 ntBASIC0.07□□□□□ -2.4
TCRBV3S1A0A5B6 MIR4711-201ENST00000578274 70 ntBASIC0.07□□□□□ -2.4
TCRBV3S1A0A5B6 HMGN1P30-201ENST00000589286 268 ntBASIC0.07□□□□□ -2.4
TCRBV3S1A0A5B6 AC110760.3-201ENST00000598794 467 ntBASIC0.07□□□□□ -2.4
TCRBV3S1A0A5B6 AC012507.3-201ENST00000603556 477 ntBASIC0.07□□□□□ -2.4
TCRBV3S1A0A5B6 AL138726.1-201ENST00000614873 333 ntBASIC0.07□□□□□ -2.4
TCRBV3S1A0A5B6 U3.9-201ENST00000363823 204 ntBASIC0.06□□□□□ -2.4
TCRBV3S1A0A5B6 RNU6-1327P-201ENST00000365302 105 ntBASIC0.06□□□□□ -2.4
TCRBV3S1A0A5B6 RNU6-142P-201ENST00000384019 107 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms