Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 Y_RNA.116-201ENST00000363292 103 ntBASIC0.59□□□□□ -2.31
TRAV1-1A0A0B4J248 RNU5E-10P-201ENST00000363506 118 ntBASIC0.59□□□□□ -2.31
TRAV1-1A0A0B4J248 SNORA32.2-201ENST00000384049 122 ntBASIC0.59□□□□□ -2.31
TRAV1-1A0A0B4J248 MIR19B1-201ENST00000384829 87 ntBASIC0.59□□□□□ -2.31
TRAV1-1A0A0B4J248 RNU2-3P-201ENST00000410144 191 ntBASIC0.59□□□□□ -2.31
TRAV1-1A0A0B4J248 RNA5SP201-201ENST00000410316 124 ntBASIC0.59□□□□□ -2.31
TRAV1-1A0A0B4J248 AC114491.1-201ENST00000416095 246 ntBASIC0.59□□□□□ -2.31
TRAV1-1A0A0B4J248 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC0.59□□□□□ -2.31
TRAV1-1A0A0B4J248 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC0.59□□□□□ -2.31
TRAV1-1A0A0B4J248 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC0.59□□□□□ -2.31
TRAV1-1A0A0B4J248 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.59□□□□□ -2.31
TRAV1-1A0A0B4J248 AC243964.1-201ENST00000441814 261 ntBASIC0.59□□□□□ -2.31
TRAV1-1A0A0B4J248 AC132479.1-201ENST00000449160 144 ntBASIC0.59□□□□□ -2.31
TRAV1-1A0A0B4J248 ATP5J2P3-201ENST00000451550 258 ntBASIC0.59□□□□□ -2.31
TRAV1-1A0A0B4J248 AC016925.1-201ENST00000458303 298 ntBASIC0.59□□□□□ -2.31
TRAV1-1A0A0B4J248 snoU13.30-201ENST00000458951 104 ntBASIC0.59□□□□□ -2.31
TRAV1-1A0A0B4J248 MTCO3P28-201ENST00000513351 515 ntBASIC0.59□□□□□ -2.31
TRAV1-1A0A0B4J248 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC0.59□□□□□ -2.31
TRAV1-1A0A0B4J248 RNU4ATAC11P-201ENST00000515939 126 ntBASIC0.59□□□□□ -2.31
TRAV1-1A0A0B4J248 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC0.59□□□□□ -2.31
TRAV1-1A0A0B4J248 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC0.59□□□□□ -2.31
TRAV1-1A0A0B4J248 AL442163.3-201ENST00000554110 156 ntBASIC0.59□□□□□ -2.31
TRAV1-1A0A0B4J248 AC008015.1-201ENST00000555505 465 ntBASIC0.59□□□□□ -2.31
TRAV1-1A0A0B4J248 LINC02290-203ENST00000556662 577 ntTSL 4 BASIC0.59□□□□□ -2.31
TRAV1-1A0A0B4J248 AP005136.1-201ENST00000579765 429 ntBASIC0.59□□□□□ -2.31
TRAV1-1A0A0B4J248 AL590229.1-201ENST00000603497 542 ntBASIC0.59□□□□□ -2.31
TRAV1-1A0A0B4J248 MIR3976-201ENST00000606807 139 ntBASIC0.59□□□□□ -2.31
TRAV1-1A0A0B4J248 BX284668.6-201ENST00000606899 438 ntBASIC0.59□□□□□ -2.31
TRAV1-1A0A0B4J248 AL138955.1-201ENST00000622881 1040 ntBASIC0.59□□□□□ -2.31
TRAV1-1A0A0B4J248 AC008163.1-202ENST00000636004 2889 ntBASIC0.59□□□□□ -2.32
TRAV1-1A0A0B4J248 AL159152.1-201ENST00000635019 2587 ntBASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 RNU6-105P-201ENST00000363909 104 ntBASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 SNORD31B-201ENST00000364977 69 ntBASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 RNU5E-7P-201ENST00000365290 117 ntBASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 AL135923.1-201ENST00000413066 196 ntTSL 3 BASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 MTND5P15-201ENST00000434246 349 ntBASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 AC069257.2-201ENST00000441819 155 ntBASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 SNRPFP3-201ENST00000457792 225 ntBASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 snoU13.27-201ENST00000459278 104 ntBASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 AC007547.1-201ENST00000462177 490 ntBASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 AC104982.1-201ENST00000478775 574 ntBASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 AP000797.1-201ENST00000478870 387 ntBASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 AL163195.1-201ENST00000496941 348 ntBASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 KRTAP13-6P-201ENST00000508999 371 ntBASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 FABP5P5-201ENST00000515537 406 ntBASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 RNU6-123P-201ENST00000516163 102 ntBASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 RN7SKP88-201ENST00000516847 250 ntBASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 AC022616.6-201ENST00000520479 119 ntBASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 MTATP6P15-201ENST00000527233 835 ntBASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 AP003171.1-201ENST00000532770 266 ntTSL 2 BASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 AP002453.2-201ENST00000533503 320 ntBASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 HSPE1P4-201ENST00000550617 308 ntBASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 FAM106DP-201ENST00000586416 501 ntBASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 AL391646.1-201ENST00000603860 190 ntBASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 AC121334.2-201ENST00000605387 271 ntBASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 AL158032.1-201ENST00000605401 106 ntBASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 AC211469.2-201ENST00000605461 205 ntBASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 7SK.8-201ENST00000612110 250 ntBASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 7SK.11-201ENST00000615477 250 ntBASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 7SK.13-201ENST00000622040 250 ntBASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 SNORD98-201ENST00000636377 67 ntBASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 MIR6866-201ENST00000638146 69 ntBASIC0.58□□□□□ -2.32
TRAV1-1A0A0B4J248 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC0.57□□□□□ -2.32
TRAV1-1A0A0B4J248 SNORD56.2-201ENST00000363242 71 ntBASIC0.57□□□□□ -2.32
TRAV1-1A0A0B4J248 SNORD114-27-201ENST00000363766 70 ntBASIC0.57□□□□□ -2.32
TRAV1-1A0A0B4J248 RNU4-1-201ENST00000363925 141 ntBASIC0.57□□□□□ -2.32
TRAV1-1A0A0B4J248 RNU6-438P-201ENST00000365561 103 ntBASIC0.57□□□□□ -2.32
TRAV1-1A0A0B4J248 MIR100-201ENST00000385259 80 ntBASIC0.57□□□□□ -2.32
TRAV1-1A0A0B4J248 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
TRAV1-1A0A0B4J248 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.57□□□□□ -2.32
TRAV1-1A0A0B4J248 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.57□□□□□ -2.32
TRAV1-1A0A0B4J248 RNU6-607P-201ENST00000411283 108 ntBASIC0.57□□□□□ -2.32
TRAV1-1A0A0B4J248 AC006461.1-201ENST00000412637 326 ntBASIC0.57□□□□□ -2.32
TRAV1-1A0A0B4J248 CYCSP33-201ENST00000414485 327 ntBASIC0.57□□□□□ -2.32
TRAV1-1A0A0B4J248 AL606490.4-201ENST00000423117 127 ntBASIC0.57□□□□□ -2.32
TRAV1-1A0A0B4J248 CALM2P2-201ENST00000428512 440 ntBASIC0.57□□□□□ -2.32
TRAV1-1A0A0B4J248 MTCO3P29-201ENST00000432119 779 ntBASIC0.57□□□□□ -2.32
TRAV1-1A0A0B4J248 AC011891.1-201ENST00000437088 432 ntTSL 3 BASIC0.57□□□□□ -2.32
TRAV1-1A0A0B4J248 MTND3P1-201ENST00000441336 220 ntBASIC0.57□□□□□ -2.32
TRAV1-1A0A0B4J248 snoU13.18-201ENST00000459483 104 ntBASIC0.57□□□□□ -2.32
TRAV1-1A0A0B4J248 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC0.57□□□□□ -2.32
TRAV1-1A0A0B4J248 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC0.57□□□□□ -2.32
TRAV1-1A0A0B4J248 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC0.57□□□□□ -2.32
TRAV1-1A0A0B4J248 LINC02220-201ENST00000510065 270 ntTSL 5 BASIC0.57□□□□□ -2.32
TRAV1-1A0A0B4J248 RNA5SP337-201ENST00000517007 109 ntBASIC0.57□□□□□ -2.32
TRAV1-1A0A0B4J248 RNA5SP503-201ENST00000517047 117 ntBASIC0.57□□□□□ -2.32
TRAV1-1A0A0B4J248 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC0.57□□□□□ -2.32
TRAV1-1A0A0B4J248 AC011604.1-201ENST00000545978 196 ntBASIC0.57□□□□□ -2.32
TRAV1-1A0A0B4J248 AC087883.1-201ENST00000551882 391 ntBASIC0.57□□□□□ -2.32
TRAV1-1A0A0B4J248 AC004817.2-201ENST00000561794 651 ntBASIC0.57□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 131.7 ms