Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC-0.2□□□□□ -2.44
LINC01558Q9Y6Z2 AC244505.5-201ENST00000443639 207 ntBASIC-0.2□□□□□ -2.44
LINC01558Q9Y6Z2 MTND1P31-201ENST00000449206 961 ntBASIC-0.2□□□□□ -2.44
LINC01558Q9Y6Z2 AC007395.1-201ENST00000451333 677 ntBASIC-0.2□□□□□ -2.44
LINC01558Q9Y6Z2 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC-0.2□□□□□ -2.44
LINC01558Q9Y6Z2 AC016925.1-201ENST00000458303 298 ntBASIC-0.2□□□□□ -2.44
LINC01558Q9Y6Z2 AC104563.1-201ENST00000476147 376 ntBASIC-0.2□□□□□ -2.44
LINC01558Q9Y6Z2 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC-0.2□□□□□ -2.44
LINC01558Q9Y6Z2 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC-0.2□□□□□ -2.44
LINC01558Q9Y6Z2 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC-0.2□□□□□ -2.44
LINC01558Q9Y6Z2 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC-0.2□□□□□ -2.44
LINC01558Q9Y6Z2 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC-0.2□□□□□ -2.44
LINC01558Q9Y6Z2 AL357312.1-201ENST00000603879 298 ntBASIC-0.2□□□□□ -2.44
LINC01558Q9Y6Z2 AP000676.3-201ENST00000623299 569 ntBASIC-0.2□□□□□ -2.44
LINC01558Q9Y6Z2 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC-0.2□□□□□ -2.44
LINC01558Q9Y6Z2 RNU6-1284P-201ENST00000363701 100 ntBASIC-0.21□□□□□ -2.44
LINC01558Q9Y6Z2 RNU4-76P-201ENST00000364509 141 ntBASIC-0.21□□□□□ -2.44
LINC01558Q9Y6Z2 Y_RNA.327-201ENST00000365201 102 ntBASIC-0.21□□□□□ -2.44
LINC01558Q9Y6Z2 SNORA75B-201ENST00000384053 137 ntBASIC-0.21□□□□□ -2.44
LINC01558Q9Y6Z2 RNU6-701P-201ENST00000384059 107 ntBASIC-0.21□□□□□ -2.44
LINC01558Q9Y6Z2 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC-0.21□□□□□ -2.44
LINC01558Q9Y6Z2 AL592431.2-201ENST00000422198 171 ntTSL 3 BASIC-0.21□□□□□ -2.44
LINC01558Q9Y6Z2 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.21□□□□□ -2.44
LINC01558Q9Y6Z2 MRPL42P4-201ENST00000453267 443 ntBASIC-0.21□□□□□ -2.44
LINC01558Q9Y6Z2 AC245047.8-201ENST00000456455 284 ntBASIC-0.21□□□□□ -2.44
LINC01558Q9Y6Z2 RNU7-59P-201ENST00000459101 61 ntBASIC-0.21□□□□□ -2.44
LINC01558Q9Y6Z2 RNU6-953P-201ENST00000459154 107 ntBASIC-0.21□□□□□ -2.44
LINC01558Q9Y6Z2 CCNG1-203ENST00000504553 732 ntTSL 3 BASIC-0.21□□□□□ -2.44
LINC01558Q9Y6Z2 RNU6-856P-201ENST00000516959 98 ntBASIC-0.21□□□□□ -2.44
LINC01558Q9Y6Z2 SCARNA16.5-201ENST00000517114 183 ntBASIC-0.21□□□□□ -2.44
LINC01558Q9Y6Z2 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC-0.21□□□□□ -2.44
LINC01558Q9Y6Z2 AC044913.1-201ENST00000557200 430 ntBASIC-0.21□□□□□ -2.44
LINC01558Q9Y6Z2 AC022523.2-201ENST00000561045 150 ntBASIC-0.21□□□□□ -2.44
LINC01558Q9Y6Z2 MIR1273C-201ENST00000578669 77 ntBASIC-0.21□□□□□ -2.44
LINC01558Q9Y6Z2 MIR4293-201ENST00000584305 78 ntBASIC-0.21□□□□□ -2.44
LINC01558Q9Y6Z2 AL391813.2-201ENST00000609113 322 ntBASIC-0.21□□□□□ -2.44
LINC01558Q9Y6Z2 MIR924-201ENST00000638017 53 ntBASIC-0.21□□□□□ -2.44
LINC01558Q9Y6Z2 SNORD31B-201ENST00000364977 69 ntBASIC-0.22□□□□□ -2.44
LINC01558Q9Y6Z2 RNU6-395P-201ENST00000365662 106 ntBASIC-0.22□□□□□ -2.44
LINC01558Q9Y6Z2 RNU6-16P-201ENST00000384385 107 ntBASIC-0.22□□□□□ -2.44
LINC01558Q9Y6Z2 MIR653-201ENST00000385279 96 ntBASIC-0.22□□□□□ -2.44
LINC01558Q9Y6Z2 DEFB133-201ENST00000398721 186 ntAPPRIS P1 TSL 1 (best) BASIC-0.22□□□□□ -2.44
LINC01558Q9Y6Z2 Y_RNA.623-201ENST00000411128 95 ntBASIC-0.22□□□□□ -2.44
LINC01558Q9Y6Z2 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC-0.22□□□□□ -2.44
LINC01558Q9Y6Z2 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC-0.22□□□□□ -2.44
LINC01558Q9Y6Z2 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC-0.22□□□□□ -2.44
LINC01558Q9Y6Z2 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC-0.22□□□□□ -2.44
LINC01558Q9Y6Z2 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC-0.22□□□□□ -2.44
LINC01558Q9Y6Z2 RNU1-86P-201ENST00000516108 154 ntBASIC-0.22□□□□□ -2.44
LINC01558Q9Y6Z2 RNU1-107P-201ENST00000516617 154 ntBASIC-0.22□□□□□ -2.44
LINC01558Q9Y6Z2 RNU6-64P-201ENST00000517119 105 ntBASIC-0.22□□□□□ -2.44
LINC01558Q9Y6Z2 AC069113.3-201ENST00000521019 150 ntBASIC-0.22□□□□□ -2.44
LINC01558Q9Y6Z2 AC027419.1-201ENST00000522976 328 ntBASIC-0.22□□□□□ -2.44
LINC01558Q9Y6Z2 SLC2A13P1-201ENST00000531560 322 ntBASIC-0.22□□□□□ -2.44
LINC01558Q9Y6Z2 HIGD1AP17-201ENST00000554576 276 ntBASIC-0.22□□□□□ -2.44
LINC01558Q9Y6Z2 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC-0.22□□□□□ -2.44
LINC01558Q9Y6Z2 MIR4290-201ENST00000583807 95 ntBASIC-0.22□□□□□ -2.44
LINC01558Q9Y6Z2 AL034555.1-201ENST00000604816 211 ntBASIC-0.22□□□□□ -2.44
LINC01558Q9Y6Z2 CTHRC1P1-201ENST00000605383 469 ntBASIC-0.22□□□□□ -2.44
LINC01558Q9Y6Z2 AL136317.1-201ENST00000612653 226 ntBASIC-0.22□□□□□ -2.44
LINC01558Q9Y6Z2 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC-0.22□□□□□ -2.44
LINC01558Q9Y6Z2 AC136475.10-201ENST00000620253 385 ntBASIC-0.22□□□□□ -2.44
LINC01558Q9Y6Z2 SCARNA4-202ENST00000625402 129 ntBASIC-0.22□□□□□ -2.44
LINC01558Q9Y6Z2 RNA5SP214-201ENST00000363378 118 ntBASIC-0.23□□□□□ -2.45
LINC01558Q9Y6Z2 Y_RNA.500-201ENST00000384466 111 ntBASIC-0.23□□□□□ -2.45
LINC01558Q9Y6Z2 RNU6-45P-201ENST00000384471 107 ntBASIC-0.23□□□□□ -2.45
LINC01558Q9Y6Z2 AL451046.2-201ENST00000403074 277 ntBASIC-0.23□□□□□ -2.45
LINC01558Q9Y6Z2 FCF1P10-201ENST00000407590 479 ntBASIC-0.23□□□□□ -2.45
LINC01558Q9Y6Z2 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC-0.23□□□□□ -2.45
LINC01558Q9Y6Z2 AC027644.1-201ENST00000419595 298 ntBASIC-0.23□□□□□ -2.45
LINC01558Q9Y6Z2 MTCO2P34-201ENST00000421994 607 ntBASIC-0.23□□□□□ -2.45
LINC01558Q9Y6Z2 AC010154.1-201ENST00000425857 269 ntBASIC-0.23□□□□□ -2.45
LINC01558Q9Y6Z2 AC073261.1-201ENST00000429409 121 ntBASIC-0.23□□□□□ -2.45
LINC01558Q9Y6Z2 SEPT7P5-201ENST00000434048 306 ntBASIC-0.23□□□□□ -2.45
LINC01558Q9Y6Z2 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC-0.23□□□□□ -2.45
LINC01558Q9Y6Z2 AC104332.1-201ENST00000440471 797 ntBASIC-0.23□□□□□ -2.45
LINC01558Q9Y6Z2 AC006026.2-201ENST00000457376 180 ntBASIC-0.23□□□□□ -2.45
LINC01558Q9Y6Z2 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC-0.23□□□□□ -2.45
LINC01558Q9Y6Z2 SNORA43.2-201ENST00000516652 128 ntBASIC-0.23□□□□□ -2.45
LINC01558Q9Y6Z2 MTND4LP26-201ENST00000518144 282 ntBASIC-0.23□□□□□ -2.45
LINC01558Q9Y6Z2 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC-0.23□□□□□ -2.45
LINC01558Q9Y6Z2 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC-0.23□□□□□ -2.45
LINC01558Q9Y6Z2 AC131055.1-201ENST00000584626 316 ntBASIC-0.23□□□□□ -2.45
LINC01558Q9Y6Z2 RPL21P136-201ENST00000605378 396 ntBASIC-0.23□□□□□ -2.45
LINC01558Q9Y6Z2 MIR6810-201ENST00000622701 70 ntBASIC-0.23□□□□□ -2.45
LINC01558Q9Y6Z2 AL603839.4-201ENST00000624658 1005 ntBASIC-0.23□□□□□ -2.45
LINC01558Q9Y6Z2 MIR338-201ENST00000636369 67 ntBASIC-0.23□□□□□ -2.45
LINC01558Q9Y6Z2 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC-0.23□□□□□ -2.45
LINC01558Q9Y6Z2 CDR1-202ENST00000625883 1485 ntBASIC-0.23□□□□□ -2.45
LINC01558Q9Y6Z2 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC-0.24□□□□□ -2.45
LINC01558Q9Y6Z2 SNORA33-201ENST00000363664 130 ntBASIC-0.24□□□□□ -2.45
LINC01558Q9Y6Z2 RNU6-744P-201ENST00000365557 107 ntBASIC-0.24□□□□□ -2.45
LINC01558Q9Y6Z2 RNU4-48P-201ENST00000365559 182 ntBASIC-0.24□□□□□ -2.45
LINC01558Q9Y6Z2 RNU6-1316P-201ENST00000384242 108 ntBASIC-0.24□□□□□ -2.45
LINC01558Q9Y6Z2 RNU6-1122P-201ENST00000384449 107 ntBASIC-0.24□□□□□ -2.45
LINC01558Q9Y6Z2 RNA5SP109-201ENST00000391010 116 ntBASIC-0.24□□□□□ -2.45
LINC01558Q9Y6Z2 RNA5SP213-201ENST00000391031 106 ntBASIC-0.24□□□□□ -2.45
LINC01558Q9Y6Z2 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC-0.24□□□□□ -2.45
LINC01558Q9Y6Z2 NCOA7-AS1-201ENST00000429007 501 ntTSL 3 BASIC-0.24□□□□□ -2.45
LINC01558Q9Y6Z2 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.24□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 173.1 ms