Protein–RNA interactions for Protein: Q9Y5X4

NR2E3, Photoreceptor-specific nuclear receptor, humanhuman

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR2E3Q9Y5X4 AC091179.1-201ENST00000461606 579 ntBASIC3.36□□□□□ -1.87
NR2E3Q9Y5X4 AC133134.1-201ENST00000466800 359 ntBASIC3.36□□□□□ -1.87
NR2E3Q9Y5X4 RPS26P21-201ENST00000475397 348 ntBASIC3.36□□□□□ -1.87
NR2E3Q9Y5X4 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.36□□□□□ -1.87
NR2E3Q9Y5X4 AC022493.2-201ENST00000506122 481 ntBASIC3.36□□□□□ -1.87
NR2E3Q9Y5X4 RNA5SP385-201ENST00000515947 110 ntBASIC3.36□□□□□ -1.87
NR2E3Q9Y5X4 SNORA64.4-201ENST00000516632 81 ntBASIC3.36□□□□□ -1.87
NR2E3Q9Y5X4 Y_RNA.720-201ENST00000517166 92 ntBASIC3.36□□□□□ -1.87
NR2E3Q9Y5X4 AC245166.1-201ENST00000521012 253 ntBASIC3.36□□□□□ -1.87
NR2E3Q9Y5X4 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC3.36□□□□□ -1.87
NR2E3Q9Y5X4 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.36□□□□□ -1.87
NR2E3Q9Y5X4 SNORD53-201ENST00000579969 78 ntBASIC3.36□□□□□ -1.87
NR2E3Q9Y5X4 AC091152.3-201ENST00000604227 325 ntBASIC3.36□□□□□ -1.87
NR2E3Q9Y5X4 TTK-211ENST00000627129 240 ntTSL 5 BASIC3.36□□□□□ -1.87
NR2E3Q9Y5X4 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
NR2E3Q9Y5X4 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC3.36□□□□□ -1.87
NR2E3Q9Y5X4 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC3.35□□□□□ -1.87
NR2E3Q9Y5X4 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.35□□□□□ -1.87
NR2E3Q9Y5X4 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.35□□□□□ -1.87
NR2E3Q9Y5X4 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
NR2E3Q9Y5X4 Y_RNA.2-201ENST00000362330 96 ntBASIC3.35□□□□□ -1.87
NR2E3Q9Y5X4 RNU6-490P-201ENST00000362985 107 ntBASIC3.35□□□□□ -1.87
NR2E3Q9Y5X4 Y_RNA.158-201ENST00000363651 101 ntBASIC3.35□□□□□ -1.87
NR2E3Q9Y5X4 Y_RNA.459-201ENST00000384251 102 ntBASIC3.35□□□□□ -1.87
NR2E3Q9Y5X4 RNU6-19P-201ENST00000384718 107 ntBASIC3.35□□□□□ -1.87
NR2E3Q9Y5X4 MIR767-201ENST00000390228 109 ntBASIC3.35□□□□□ -1.87
NR2E3Q9Y5X4 MRPL42P3-201ENST00000401492 326 ntBASIC3.35□□□□□ -1.87
NR2E3Q9Y5X4 AL356057.3-201ENST00000402607 340 ntBASIC3.35□□□□□ -1.87
NR2E3Q9Y5X4 RNA5SP229-201ENST00000410809 99 ntBASIC3.35□□□□□ -1.87
NR2E3Q9Y5X4 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC3.35□□□□□ -1.87
NR2E3Q9Y5X4 AC074117.2-201ENST00000417130 397 ntBASIC3.35□□□□□ -1.87
NR2E3Q9Y5X4 MRPS18CP6-201ENST00000423587 223 ntBASIC3.35□□□□□ -1.87
NR2E3Q9Y5X4 BX276092.3-201ENST00000424182 230 ntBASIC3.35□□□□□ -1.87
NR2E3Q9Y5X4 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.35□□□□□ -1.87
NR2E3Q9Y5X4 HMGN1P18-201ENST00000457642 277 ntBASIC3.35□□□□□ -1.87
NR2E3Q9Y5X4 MTND5P22-201ENST00000458380 195 ntBASIC3.35□□□□□ -1.87
NR2E3Q9Y5X4 AC008571.1-201ENST00000467232 300 ntBASIC3.35□□□□□ -1.87
NR2E3Q9Y5X4 RNU5F-8P-201ENST00000515941 111 ntBASIC3.35□□□□□ -1.87
NR2E3Q9Y5X4 ACA59.1-201ENST00000515966 143 ntBASIC3.35□□□□□ -1.87
NR2E3Q9Y5X4 RNU6-612P-201ENST00000516909 102 ntBASIC3.35□□□□□ -1.87
NR2E3Q9Y5X4 SNORA31.18-201ENST00000517043 134 ntBASIC3.35□□□□□ -1.87
NR2E3Q9Y5X4 AC109446.1-201ENST00000566172 220 ntBASIC3.35□□□□□ -1.87
NR2E3Q9Y5X4 AP000942.4-201ENST00000604811 241 ntBASIC3.35□□□□□ -1.87
NR2E3Q9Y5X4 AC083806.3-201ENST00000614016 455 ntBASIC3.35□□□□□ -1.87
NR2E3Q9Y5X4 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC3.35□□□□□ -1.87
NR2E3Q9Y5X4 AC090617.7-201ENST00000623952 126 ntBASIC3.35□□□□□ -1.87
NR2E3Q9Y5X4 AC243829.7-201ENST00000633081 225 ntBASIC3.35□□□□□ -1.87
NR2E3Q9Y5X4 MTND5P16-201ENST00000460269 1703 ntBASIC3.35□□□□□ -1.87
NR2E3Q9Y5X4 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NR2E3Q9Y5X4 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
NR2E3Q9Y5X4 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.34□□□□□ -1.87
NR2E3Q9Y5X4 AC091564.4-201ENST00000533934 2194 ntBASIC3.34□□□□□ -1.87
NR2E3Q9Y5X4 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
NR2E3Q9Y5X4 RNU6-799P-201ENST00000363567 107 ntBASIC3.34□□□□□ -1.87
NR2E3Q9Y5X4 U8.8-201ENST00000365399 135 ntBASIC3.34□□□□□ -1.87
NR2E3Q9Y5X4 RNU6-487P-201ENST00000365430 104 ntBASIC3.34□□□□□ -1.87
NR2E3Q9Y5X4 RNU6-843P-201ENST00000384454 104 ntBASIC3.34□□□□□ -1.87
NR2E3Q9Y5X4 RNU6-748P-201ENST00000384648 107 ntBASIC3.34□□□□□ -1.87
NR2E3Q9Y5X4 MIR568-201ENST00000385036 95 ntBASIC3.34□□□□□ -1.87
NR2E3Q9Y5X4 RNU1-101P-201ENST00000391171 127 ntBASIC3.34□□□□□ -1.87
NR2E3Q9Y5X4 Y_RNA.645-201ENST00000391229 102 ntBASIC3.34□□□□□ -1.87
NR2E3Q9Y5X4 RNU6-985P-201ENST00000410182 104 ntBASIC3.34□□□□□ -1.87
NR2E3Q9Y5X4 RNU6-1245P-201ENST00000411130 106 ntBASIC3.34□□□□□ -1.87
NR2E3Q9Y5X4 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC3.34□□□□□ -1.87
NR2E3Q9Y5X4 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC3.34□□□□□ -1.87
NR2E3Q9Y5X4 AC011816.1-201ENST00000441346 546 ntBASIC3.34□□□□□ -1.87
NR2E3Q9Y5X4 AC012308.1-201ENST00000451232 178 ntBASIC3.34□□□□□ -1.87
NR2E3Q9Y5X4 ANXA2P1-201ENST00000505539 926 ntBASIC3.34□□□□□ -1.87
NR2E3Q9Y5X4 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.34□□□□□ -1.87
NR2E3Q9Y5X4 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.34□□□□□ -1.87
NR2E3Q9Y5X4 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.34□□□□□ -1.87
NR2E3Q9Y5X4 RNU1-143P-201ENST00000516296 146 ntBASIC3.34□□□□□ -1.87
NR2E3Q9Y5X4 AP005902.1-201ENST00000521358 186 ntBASIC3.34□□□□□ -1.87
NR2E3Q9Y5X4 AP002884.4-201ENST00000527589 594 ntTSL 3 BASIC3.34□□□□□ -1.87
NR2E3Q9Y5X4 DEFB122-202ENST00000569013 197 ntBASIC3.34□□□□□ -1.87
NR2E3Q9Y5X4 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.34□□□□□ -1.87
NR2E3Q9Y5X4 U1.23-201ENST00000610293 146 ntBASIC3.34□□□□□ -1.87
NR2E3Q9Y5X4 MIR8076-201ENST00000611401 83 ntBASIC3.34□□□□□ -1.87
NR2E3Q9Y5X4 RNU1-68P-201ENST00000615382 146 ntBASIC3.34□□□□□ -1.87
NR2E3Q9Y5X4 U1.39-201ENST00000621562 146 ntBASIC3.34□□□□□ -1.87
NR2E3Q9Y5X4 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
NR2E3Q9Y5X4 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NR2E3Q9Y5X4 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NR2E3Q9Y5X4 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
NR2E3Q9Y5X4 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NR2E3Q9Y5X4 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC3.33□□□□□ -1.88
NR2E3Q9Y5X4 SNORD56.3-201ENST00000363507 71 ntBASIC3.33□□□□□ -1.88
NR2E3Q9Y5X4 Y_RNA.144-201ENST00000363521 113 ntBASIC3.33□□□□□ -1.88
NR2E3Q9Y5X4 RNA5SP139-201ENST00000364340 117 ntBASIC3.33□□□□□ -1.88
NR2E3Q9Y5X4 BMS1P22-201ENST00000414726 313 ntBASIC3.33□□□□□ -1.88
NR2E3Q9Y5X4 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC3.33□□□□□ -1.88
NR2E3Q9Y5X4 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.33□□□□□ -1.88
NR2E3Q9Y5X4 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.33□□□□□ -1.88
NR2E3Q9Y5X4 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.33□□□□□ -1.88
NR2E3Q9Y5X4 AC022447.4-201ENST00000504053 364 ntBASIC3.33□□□□□ -1.88
NR2E3Q9Y5X4 MTND4LP22-201ENST00000508209 276 ntBASIC3.33□□□□□ -1.88
NR2E3Q9Y5X4 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC3.33□□□□□ -1.88
NR2E3Q9Y5X4 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
NR2E3Q9Y5X4 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.33□□□□□ -1.88
NR2E3Q9Y5X4 AL391813.1-201ENST00000603098 260 ntBASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms