Protein–RNA interactions for Protein: Q9Y5X1

SNX9, Sorting nexin-9, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX9Q9Y5X1 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.7□□□□□ -1.98
SNX9Q9Y5X1 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.69□□□□□ -1.98
SNX9Q9Y5X1 DLEU2_6.3-201ENST00000340052 136 ntBASIC2.69□□□□□ -1.98
SNX9Q9Y5X1 RNU6-1059P-201ENST00000363752 98 ntBASIC2.69□□□□□ -1.98
SNX9Q9Y5X1 RNU6-336P-201ENST00000364891 107 ntBASIC2.69□□□□□ -1.98
SNX9Q9Y5X1 RNU5E-7P-201ENST00000365290 117 ntBASIC2.69□□□□□ -1.98
SNX9Q9Y5X1 Y_RNA.404-201ENST00000383978 102 ntBASIC2.69□□□□□ -1.98
SNX9Q9Y5X1 RNU6-842P-201ENST00000384269 107 ntBASIC2.69□□□□□ -1.98
SNX9Q9Y5X1 RNU6-43P-201ENST00000384302 107 ntBASIC2.69□□□□□ -1.98
SNX9Q9Y5X1 Y_RNA.579-201ENST00000390939 94 ntBASIC2.69□□□□□ -1.98
SNX9Q9Y5X1 FTH1P15-201ENST00000406984 280 ntBASIC2.69□□□□□ -1.98
SNX9Q9Y5X1 RNU6-1050P-201ENST00000410388 107 ntBASIC2.69□□□□□ -1.98
SNX9Q9Y5X1 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC2.69□□□□□ -1.98
SNX9Q9Y5X1 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.69□□□□□ -1.98
SNX9Q9Y5X1 AL445687.1-201ENST00000439946 251 ntBASIC2.69□□□□□ -1.98
SNX9Q9Y5X1 MTCO3P10-201ENST00000455912 772 ntBASIC2.69□□□□□ -1.98
SNX9Q9Y5X1 ELOCP24-201ENST00000456370 334 ntBASIC2.69□□□□□ -1.98
SNX9Q9Y5X1 RPS29P27-201ENST00000463711 170 ntBASIC2.69□□□□□ -1.98
SNX9Q9Y5X1 RNU6-377P-201ENST00000515965 102 ntBASIC2.69□□□□□ -1.98
SNX9Q9Y5X1 AP004607.1-201ENST00000524456 203 ntBASIC2.69□□□□□ -1.98
SNX9Q9Y5X1 CR383656.8-201ENST00000549046 145 ntBASIC2.69□□□□□ -1.98
SNX9Q9Y5X1 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.69□□□□□ -1.98
SNX9Q9Y5X1 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.69□□□□□ -1.98
SNX9Q9Y5X1 MIR3117-201ENST00000584034 78 ntBASIC2.69□□□□□ -1.98
SNX9Q9Y5X1 AC011494.1-201ENST00000596454 237 ntBASIC2.69□□□□□ -1.98
SNX9Q9Y5X1 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
SNX9Q9Y5X1 AL133215.3-201ENST00000609801 448 ntBASIC2.69□□□□□ -1.98
SNX9Q9Y5X1 AC084781.2-201ENST00000615568 161 ntBASIC2.69□□□□□ -1.98
SNX9Q9Y5X1 AC126177.8-201ENST00000618339 1015 ntBASIC2.69□□□□□ -1.98
SNX9Q9Y5X1 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.69□□□□□ -1.98
SNX9Q9Y5X1 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.69□□□□□ -1.98
SNX9Q9Y5X1 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.69□□□□□ -1.98
SNX9Q9Y5X1 MTND4P23-201ENST00000447723 1363 ntBASIC2.69□□□□□ -1.98
SNX9Q9Y5X1 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
SNX9Q9Y5X1 ZNF271P-202ENST00000465539 1970 ntBASIC2.69□□□□□ -1.98
SNX9Q9Y5X1 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
SNX9Q9Y5X1 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
SNX9Q9Y5X1 DDIAS-201ENST00000329143 3367 ntAPPRIS P2 TSL 1 (best) BASIC2.68□□□□□ -1.98
SNX9Q9Y5X1 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
SNX9Q9Y5X1 RNA5SP393-201ENST00000363423 117 ntBASIC2.68□□□□□ -1.98
SNX9Q9Y5X1 SNORD42.2-201ENST00000365570 69 ntBASIC2.68□□□□□ -1.98
SNX9Q9Y5X1 RNU6-310P-201ENST00000384655 107 ntBASIC2.68□□□□□ -1.98
SNX9Q9Y5X1 MIR518C-201ENST00000384822 101 ntBASIC2.68□□□□□ -1.98
SNX9Q9Y5X1 MIR517A-201ENST00000385001 87 ntBASIC2.68□□□□□ -1.98
SNX9Q9Y5X1 MTCYBP4-201ENST00000401524 249 ntBASIC2.68□□□□□ -1.98
SNX9Q9Y5X1 Y_RNA.594-201ENST00000410373 140 ntBASIC2.68□□□□□ -1.98
SNX9Q9Y5X1 Y_RNA.646-201ENST00000410980 101 ntBASIC2.68□□□□□ -1.98
SNX9Q9Y5X1 AL354751.2-201ENST00000415471 210 ntBASIC2.68□□□□□ -1.98
SNX9Q9Y5X1 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.68□□□□□ -1.98
SNX9Q9Y5X1 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.68□□□□□ -1.98
SNX9Q9Y5X1 AC236972.2-201ENST00000434979 310 ntBASIC2.68□□□□□ -1.98
SNX9Q9Y5X1 RPS15AP5-201ENST00000436276 388 ntBASIC2.68□□□□□ -1.98
SNX9Q9Y5X1 MTCYBP6-201ENST00000441810 138 ntBASIC2.68□□□□□ -1.98
SNX9Q9Y5X1 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC2.68□□□□□ -1.98
SNX9Q9Y5X1 AC007677.1-201ENST00000445757 515 ntBASIC2.68□□□□□ -1.98
SNX9Q9Y5X1 AC107626.1-201ENST00000471084 183 ntBASIC2.68□□□□□ -1.98
SNX9Q9Y5X1 AC128713.1-201ENST00000471495 306 ntBASIC2.68□□□□□ -1.98
SNX9Q9Y5X1 RPL23AP94-201ENST00000512518 302 ntBASIC2.68□□□□□ -1.98
SNX9Q9Y5X1 SCARNA11.3-201ENST00000517276 130 ntBASIC2.68□□□□□ -1.98
SNX9Q9Y5X1 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.68□□□□□ -1.98
SNX9Q9Y5X1 MIR5092-201ENST00000583139 88 ntBASIC2.68□□□□□ -1.98
SNX9Q9Y5X1 AC130469.1-201ENST00000597256 388 ntTSL 5 BASIC2.68□□□□□ -1.98
SNX9Q9Y5X1 AC009314.1-201ENST00000603871 304 ntBASIC2.68□□□□□ -1.98
SNX9Q9Y5X1 AC019193.3-201ENST00000609144 554 ntBASIC2.68□□□□□ -1.98
SNX9Q9Y5X1 USP12-203ENST00000620323 349 ntTSL 3 BASIC2.68□□□□□ -1.98
SNX9Q9Y5X1 IGHVIII-44-202ENST00000636235 289 ntBASIC2.68□□□□□ -1.98
SNX9Q9Y5X1 AL669831.3-213ENST00000636676 183 ntBASIC2.68□□□□□ -1.98
SNX9Q9Y5X1 KPNA2P1-201ENST00000458289 1591 ntBASIC2.68□□□□□ -1.98
SNX9Q9Y5X1 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.68□□□□□ -1.98
SNX9Q9Y5X1 RNU4-82P-201ENST00000362443 140 ntBASIC2.67□□□□□ -1.98
SNX9Q9Y5X1 Y_RNA.138-201ENST00000363462 102 ntBASIC2.67□□□□□ -1.98
SNX9Q9Y5X1 RNU6-105P-201ENST00000363909 104 ntBASIC2.67□□□□□ -1.98
SNX9Q9Y5X1 RNU6-1317P-201ENST00000364582 104 ntBASIC2.67□□□□□ -1.98
SNX9Q9Y5X1 Y_RNA.315-201ENST00000365117 102 ntBASIC2.67□□□□□ -1.98
SNX9Q9Y5X1 Y_RNA.431-201ENST00000384086 102 ntBASIC2.67□□□□□ -1.98
SNX9Q9Y5X1 SNORA75.4-201ENST00000391278 119 ntBASIC2.67□□□□□ -1.98
SNX9Q9Y5X1 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.67□□□□□ -1.98
SNX9Q9Y5X1 AC009963.1-201ENST00000417265 157 ntBASIC2.67□□□□□ -1.98
SNX9Q9Y5X1 MTCO2P27-201ENST00000420740 428 ntBASIC2.67□□□□□ -1.98
SNX9Q9Y5X1 TOMM20P4-201ENST00000427861 435 ntBASIC2.67□□□□□ -1.98
SNX9Q9Y5X1 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.67□□□□□ -1.98
SNX9Q9Y5X1 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.67□□□□□ -1.98
SNX9Q9Y5X1 AL133396.1-201ENST00000432048 687 ntBASIC2.67□□□□□ -1.98
SNX9Q9Y5X1 AL513328.1-201ENST00000446460 224 ntBASIC2.67□□□□□ -1.98
SNX9Q9Y5X1 PCMTD1P1-201ENST00000455560 355 ntBASIC2.67□□□□□ -1.98
SNX9Q9Y5X1 RPL9P9-202ENST00000466501 579 ntBASIC2.67□□□□□ -1.98
SNX9Q9Y5X1 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.67□□□□□ -1.98
SNX9Q9Y5X1 RNU6ATAC13P-201ENST00000516152 131 ntBASIC2.67□□□□□ -1.98
SNX9Q9Y5X1 RNU1-54P-201ENST00000517181 120 ntBASIC2.67□□□□□ -1.98
SNX9Q9Y5X1 AC109329.2-201ENST00000519658 482 ntBASIC2.67□□□□□ -1.98
SNX9Q9Y5X1 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.67□□□□□ -1.98
SNX9Q9Y5X1 MIR4446-201ENST00000578505 67 ntBASIC2.67□□□□□ -1.98
SNX9Q9Y5X1 AC091152.3-201ENST00000604227 325 ntBASIC2.67□□□□□ -1.98
SNX9Q9Y5X1 AL353621.2-201ENST00000605340 133 ntBASIC2.67□□□□□ -1.98
SNX9Q9Y5X1 AC009229.3-201ENST00000608056 282 ntBASIC2.67□□□□□ -1.98
SNX9Q9Y5X1 MIR7515-201ENST00000637837 67 ntBASIC2.67□□□□□ -1.98
SNX9Q9Y5X1 AC099654.10-201ENST00000640395 161 ntBASIC2.67□□□□□ -1.98
SNX9Q9Y5X1 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
SNX9Q9Y5X1 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.67□□□□□ -1.98
SNX9Q9Y5X1 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 110.9 ms