Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 AL450472.1-202ENST00000637286 180 ntBASIC3.35□□□□□ -1.87
COL4A3BPQ9Y5P4 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC3.35□□□□□ -1.87
COL4A3BPQ9Y5P4 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC3.35□□□□□ -1.87
COL4A3BPQ9Y5P4 AC000403.1-201ENST00000613696 3585 ntBASIC3.35□□□□□ -1.87
COL4A3BPQ9Y5P4 AC242426.3-202ENST00000607149 2397 ntTSL 5 BASIC3.34□□□□□ -1.87
COL4A3BPQ9Y5P4 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.34□□□□□ -1.87
COL4A3BPQ9Y5P4 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.87
COL4A3BPQ9Y5P4 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
COL4A3BPQ9Y5P4 TBC1D31-206ENST00000518805 2201 ntTSL 2 BASIC3.34□□□□□ -1.87
COL4A3BPQ9Y5P4 RNU6-842P-201ENST00000384269 107 ntBASIC3.34□□□□□ -1.87
COL4A3BPQ9Y5P4 Y_RNA.490-201ENST00000384413 102 ntBASIC3.34□□□□□ -1.87
COL4A3BPQ9Y5P4 MIR95-201ENST00000385072 81 ntBASIC3.34□□□□□ -1.87
COL4A3BPQ9Y5P4 SNORA75.4-201ENST00000391278 119 ntBASIC3.34□□□□□ -1.87
COL4A3BPQ9Y5P4 RNA5SP494-201ENST00000410653 129 ntBASIC3.34□□□□□ -1.87
COL4A3BPQ9Y5P4 USMG5P1-201ENST00000425964 177 ntBASIC3.34□□□□□ -1.87
COL4A3BPQ9Y5P4 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC3.34□□□□□ -1.87
COL4A3BPQ9Y5P4 AC117440.1-201ENST00000474107 571 ntBASIC3.34□□□□□ -1.87
COL4A3BPQ9Y5P4 AC021146.2-201ENST00000504736 556 ntBASIC3.34□□□□□ -1.87
COL4A3BPQ9Y5P4 SNORA48.11-201ENST00000517015 89 ntBASIC3.34□□□□□ -1.87
COL4A3BPQ9Y5P4 EIF4BP1-201ENST00000554881 351 ntBASIC3.34□□□□□ -1.87
COL4A3BPQ9Y5P4 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC3.34□□□□□ -1.87
COL4A3BPQ9Y5P4 PWRN1-203ENST00000564898 389 ntTSL 5 BASIC3.34□□□□□ -1.87
COL4A3BPQ9Y5P4 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.34□□□□□ -1.87
COL4A3BPQ9Y5P4 ZNF299P-201ENST00000406845 1804 ntBASIC3.34□□□□□ -1.87
COL4A3BPQ9Y5P4 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC3.34□□□□□ -1.87
COL4A3BPQ9Y5P4 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
COL4A3BPQ9Y5P4 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.34□□□□□ -1.88
COL4A3BPQ9Y5P4 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC3.34□□□□□ -1.88
COL4A3BPQ9Y5P4 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
COL4A3BPQ9Y5P4 RNU6-1159P-201ENST00000362933 107 ntBASIC3.33□□□□□ -1.88
COL4A3BPQ9Y5P4 RNU5B-2P-201ENST00000363036 113 ntBASIC3.33□□□□□ -1.88
COL4A3BPQ9Y5P4 RNA5SP125-201ENST00000364843 120 ntBASIC3.33□□□□□ -1.88
COL4A3BPQ9Y5P4 RNU4-9P-201ENST00000364951 139 ntBASIC3.33□□□□□ -1.88
COL4A3BPQ9Y5P4 MTCYBP4-201ENST00000401524 249 ntBASIC3.33□□□□□ -1.88
COL4A3BPQ9Y5P4 RNU4-14P-201ENST00000410858 122 ntBASIC3.33□□□□□ -1.88
COL4A3BPQ9Y5P4 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC3.33□□□□□ -1.88
COL4A3BPQ9Y5P4 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.33□□□□□ -1.88
COL4A3BPQ9Y5P4 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.33□□□□□ -1.88
COL4A3BPQ9Y5P4 FO393415.2-201ENST00000480085 343 ntBASIC3.33□□□□□ -1.88
COL4A3BPQ9Y5P4 RN7SL633P-201ENST00000488974 297 ntBASIC3.33□□□□□ -1.88
COL4A3BPQ9Y5P4 AC145146.1-201ENST00000496370 254 ntBASIC3.33□□□□□ -1.88
COL4A3BPQ9Y5P4 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.33□□□□□ -1.88
COL4A3BPQ9Y5P4 AC005741.1-201ENST00000511094 432 ntBASIC3.33□□□□□ -1.88
COL4A3BPQ9Y5P4 MIR5696-201ENST00000578474 85 ntBASIC3.33□□□□□ -1.88
COL4A3BPQ9Y5P4 AL078605.1-201ENST00000603529 500 ntBASIC3.33□□□□□ -1.88
COL4A3BPQ9Y5P4 RNU6ATAC35P-201ENST00000609276 444 ntBASIC3.33□□□□□ -1.88
COL4A3BPQ9Y5P4 MESTIT1_1.1-201ENST00000618871 140 ntBASIC3.33□□□□□ -1.88
COL4A3BPQ9Y5P4 AC007318.2-201ENST00000620999 243 ntBASIC3.33□□□□□ -1.88
COL4A3BPQ9Y5P4 AL359757.2-201ENST00000624309 274 ntBASIC3.33□□□□□ -1.88
COL4A3BPQ9Y5P4 SCARNA4-201ENST00000629045 128 ntBASIC3.33□□□□□ -1.88
COL4A3BPQ9Y5P4 AL669831.3-213ENST00000636676 183 ntBASIC3.33□□□□□ -1.88
COL4A3BPQ9Y5P4 AC112487.2-201ENST00000637950 304 ntBASIC3.33□□□□□ -1.88
COL4A3BPQ9Y5P4 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
COL4A3BPQ9Y5P4 AL035425.3-201ENST00000564206 4996 ntBASIC3.33□□□□□ -1.88
COL4A3BPQ9Y5P4 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.32□□□□□ -1.88
COL4A3BPQ9Y5P4 RNU6-1032P-201ENST00000384100 107 ntBASIC3.32□□□□□ -1.88
COL4A3BPQ9Y5P4 SNORA36A-201ENST00000384221 132 ntBASIC3.32□□□□□ -1.88
COL4A3BPQ9Y5P4 MTCYBP2-201ENST00000407745 171 ntBASIC3.32□□□□□ -1.88
COL4A3BPQ9Y5P4 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.32□□□□□ -1.88
COL4A3BPQ9Y5P4 MTCO2P27-201ENST00000420740 428 ntBASIC3.32□□□□□ -1.88
COL4A3BPQ9Y5P4 AC022018.1-201ENST00000430685 241 ntBASIC3.32□□□□□ -1.88
COL4A3BPQ9Y5P4 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.32□□□□□ -1.88
COL4A3BPQ9Y5P4 AC236972.2-201ENST00000434979 310 ntBASIC3.32□□□□□ -1.88
COL4A3BPQ9Y5P4 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC3.32□□□□□ -1.88
COL4A3BPQ9Y5P4 MRPS36P4-201ENST00000534436 298 ntBASIC3.32□□□□□ -1.88
COL4A3BPQ9Y5P4 LINC02293-201ENST00000548335 574 ntTSL 5 BASIC3.32□□□□□ -1.88
COL4A3BPQ9Y5P4 FRG2DP-202ENST00000566967 323 ntBASIC3.32□□□□□ -1.88
COL4A3BPQ9Y5P4 U4atac.1-201ENST00000618345 95 ntBASIC3.32□□□□□ -1.88
COL4A3BPQ9Y5P4 AC006386.2-201ENST00000624491 75 ntBASIC3.32□□□□□ -1.88
COL4A3BPQ9Y5P4 AC012005.1-201ENST00000624575 75 ntBASIC3.32□□□□□ -1.88
COL4A3BPQ9Y5P4 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
COL4A3BPQ9Y5P4 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL4A3BPQ9Y5P4 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
COL4A3BPQ9Y5P4 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
COL4A3BPQ9Y5P4 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
COL4A3BPQ9Y5P4 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.31□□□□□ -1.88
COL4A3BPQ9Y5P4 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
COL4A3BPQ9Y5P4 RNU4-15P-201ENST00000362613 141 ntBASIC3.31□□□□□ -1.88
COL4A3BPQ9Y5P4 RNU6-1188P-201ENST00000363795 107 ntBASIC3.31□□□□□ -1.88
COL4A3BPQ9Y5P4 SNORA38-201ENST00000363946 132 ntBASIC3.31□□□□□ -1.88
COL4A3BPQ9Y5P4 Y_RNA.259-201ENST00000364619 101 ntBASIC3.31□□□□□ -1.88
COL4A3BPQ9Y5P4 RNU6-1274P-201ENST00000384557 107 ntBASIC3.31□□□□□ -1.88
COL4A3BPQ9Y5P4 COTL1P1-201ENST00000422309 375 ntBASIC3.31□□□□□ -1.88
COL4A3BPQ9Y5P4 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC3.31□□□□□ -1.88
COL4A3BPQ9Y5P4 RNU7-26P-201ENST00000458980 63 ntBASIC3.31□□□□□ -1.88
COL4A3BPQ9Y5P4 Y_RNA.653-201ENST00000459091 95 ntBASIC3.31□□□□□ -1.88
COL4A3BPQ9Y5P4 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.31□□□□□ -1.88
COL4A3BPQ9Y5P4 RAB11AP2-201ENST00000545905 639 ntBASIC3.31□□□□□ -1.88
COL4A3BPQ9Y5P4 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.31□□□□□ -1.88
COL4A3BPQ9Y5P4 LARP7P3-201ENST00000579888 337 ntBASIC3.31□□□□□ -1.88
COL4A3BPQ9Y5P4 RPL23AP88-201ENST00000605759 454 ntBASIC3.31□□□□□ -1.88
COL4A3BPQ9Y5P4 AC005520.5-201ENST00000613926 164 ntBASIC3.31□□□□□ -1.88
COL4A3BPQ9Y5P4 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.31□□□□□ -1.88
COL4A3BPQ9Y5P4 MTND5P27-201ENST00000428871 1720 ntBASIC3.3□□□□□ -1.88
COL4A3BPQ9Y5P4 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC3.3□□□□□ -1.88
COL4A3BPQ9Y5P4 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
COL4A3BPQ9Y5P4 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC3.3□□□□□ -1.88
COL4A3BPQ9Y5P4 RNU4-73P-201ENST00000363164 141 ntBASIC3.3□□□□□ -1.88
COL4A3BPQ9Y5P4 MIR561-201ENST00000385216 97 ntBASIC3.3□□□□□ -1.88
COL4A3BPQ9Y5P4 MIR208B-201ENST00000401172 77 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 131.4 ms