Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.14□□□□□ -1.75
FNDC3AQ9Y2H6 MIR3136-201ENST00000583498 78 ntBASIC4.14□□□□□ -1.75
FNDC3AQ9Y2H6 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
FNDC3AQ9Y2H6 CR392039.5-201ENST00000623201 510 ntBASIC4.14□□□□□ -1.75
FNDC3AQ9Y2H6 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.14□□□□□ -1.75
FNDC3AQ9Y2H6 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
FNDC3AQ9Y2H6 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
FNDC3AQ9Y2H6 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC4.14□□□□□ -1.75
FNDC3AQ9Y2H6 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.14□□□□□ -1.75
FNDC3AQ9Y2H6 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 CEP57L1-223ENST00000523787 2522 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 RNU1-62P-201ENST00000362599 164 ntBASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 RNU6-324P-201ENST00000363957 106 ntBASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 RNU6-81P-201ENST00000365608 104 ntBASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 RNU6-19P-201ENST00000384718 107 ntBASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 MIR186-201ENST00000384988 86 ntBASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 RNU2-2P-201ENST00000410396 191 ntBASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 AC096649.2-201ENST00000416186 393 ntBASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 AC006011.1-201ENST00000442758 349 ntBASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 AL133547.1-201ENST00000448546 220 ntBASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 RNA5SP246-201ENST00000458909 119 ntBASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 AC010469.1-201ENST00000463864 576 ntBASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 AL356575.1-201ENST00000603008 283 ntBASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 AC091152.3-201ENST00000604227 325 ntBASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 SNRPGP20-201ENST00000604477 205 ntBASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 RNU2-4P-201ENST00000606190 192 ntBASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 U2.15-201ENST00000611544 191 ntBASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 U2.16-201ENST00000613119 191 ntBASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 U2.12-201ENST00000613778 191 ntBASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 U2.9-201ENST00000615427 191 ntBASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 U2.11-201ENST00000616345 191 ntBASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 U2.2-201ENST00000616535 191 ntBASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 U2.3-201ENST00000617785 191 ntBASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 U2.19-201ENST00000618602 191 ntBASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 RNU2-1-201ENST00000618664 191 ntBASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 U2.6-201ENST00000619225 191 ntBASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 U2.5-201ENST00000619465 191 ntBASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 U2.10-201ENST00000620268 191 ntBASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 MIR6500-201ENST00000622700 86 ntBASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 AC018692.3-201ENST00000623929 123 ntBASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 AC016588.2-201ENST00000632484 3021 ntBASIC4.13□□□□□ -1.75
FNDC3AQ9Y2H6 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC4.12□□□□□ -1.75
FNDC3AQ9Y2H6 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
FNDC3AQ9Y2H6 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
FNDC3AQ9Y2H6 Y_RNA.40-201ENST00000362645 93 ntBASIC4.12□□□□□ -1.75
FNDC3AQ9Y2H6 MIR200C-201ENST00000384980 68 ntBASIC4.12□□□□□ -1.75
FNDC3AQ9Y2H6 MIR320B2-201ENST00000408479 138 ntBASIC4.12□□□□□ -1.75
FNDC3AQ9Y2H6 RNU2-49P-201ENST00000410666 184 ntBASIC4.12□□□□□ -1.75
FNDC3AQ9Y2H6 PTGES3P4-201ENST00000426243 356 ntBASIC4.12□□□□□ -1.75
FNDC3AQ9Y2H6 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.12□□□□□ -1.75
FNDC3AQ9Y2H6 AL353748.1-201ENST00000440753 474 ntBASIC4.12□□□□□ -1.75
FNDC3AQ9Y2H6 AL500522.2-201ENST00000448562 343 ntBASIC4.12□□□□□ -1.75
FNDC3AQ9Y2H6 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC4.12□□□□□ -1.75
FNDC3AQ9Y2H6 RPL29P14-201ENST00000495837 428 ntBASIC4.12□□□□□ -1.75
FNDC3AQ9Y2H6 SUMO2P18-201ENST00000518873 252 ntBASIC4.12□□□□□ -1.75
FNDC3AQ9Y2H6 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.12□□□□□ -1.75
FNDC3AQ9Y2H6 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC4.12□□□□□ -1.75
FNDC3AQ9Y2H6 MIR5685-201ENST00000579080 79 ntBASIC4.12□□□□□ -1.75
FNDC3AQ9Y2H6 AL034555.1-201ENST00000604816 211 ntBASIC4.12□□□□□ -1.75
FNDC3AQ9Y2H6 AL137843.1-201ENST00000605078 385 ntBASIC4.12□□□□□ -1.75
FNDC3AQ9Y2H6 AC005520.5-201ENST00000613926 164 ntBASIC4.12□□□□□ -1.75
FNDC3AQ9Y2H6 AC012442.3-202ENST00000636742 206 ntBASIC4.12□□□□□ -1.75
FNDC3AQ9Y2H6 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
FNDC3AQ9Y2H6 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
FNDC3AQ9Y2H6 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.12□□□□□ -1.75
FNDC3AQ9Y2H6 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
FNDC3AQ9Y2H6 CCNH-206ENST00000508855 2391 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
FNDC3AQ9Y2H6 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
FNDC3AQ9Y2H6 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
FNDC3AQ9Y2H6 SNORD46.1-201ENST00000364139 104 ntBASIC4.11□□□□□ -1.75
FNDC3AQ9Y2H6 SNORA1.3-201ENST00000384676 136 ntBASIC4.11□□□□□ -1.75
FNDC3AQ9Y2H6 RNU6ATAC19P-201ENST00000408096 110 ntBASIC4.11□□□□□ -1.75
FNDC3AQ9Y2H6 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC4.11□□□□□ -1.75
FNDC3AQ9Y2H6 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC4.11□□□□□ -1.75
FNDC3AQ9Y2H6 Y_RNA.637-201ENST00000459424 114 ntBASIC4.11□□□□□ -1.75
FNDC3AQ9Y2H6 RNU6-436P-201ENST00000516171 114 ntBASIC4.11□□□□□ -1.75
FNDC3AQ9Y2H6 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC4.11□□□□□ -1.75
FNDC3AQ9Y2H6 MIR3944-201ENST00000581277 108 ntBASIC4.11□□□□□ -1.75
FNDC3AQ9Y2H6 AC008739.3-201ENST00000603262 127 ntBASIC4.11□□□□□ -1.75
FNDC3AQ9Y2H6 AL133393.1-201ENST00000603277 287 ntBASIC4.11□□□□□ -1.75
FNDC3AQ9Y2H6 AC006380.1-201ENST00000603598 186 ntBASIC4.11□□□□□ -1.75
FNDC3AQ9Y2H6 MIR432-201ENST00000606207 94 ntBASIC4.11□□□□□ -1.75
FNDC3AQ9Y2H6 MIR7151-201ENST00000617477 60 ntBASIC4.11□□□□□ -1.75
FNDC3AQ9Y2H6 MIR7702-201ENST00000621931 59 ntBASIC4.11□□□□□ -1.75
FNDC3AQ9Y2H6 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC4.11□□□□□ -1.75
FNDC3AQ9Y2H6 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
FNDC3AQ9Y2H6 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
FNDC3AQ9Y2H6 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
FNDC3AQ9Y2H6 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
FNDC3AQ9Y2H6 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
FNDC3AQ9Y2H6 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 105.6 ms