Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC008489.1-201ENST00000524271 483 ntBASIC5.2□□□□□ -1.58
PDZRN3Q9UPQ7 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC5.2□□□□□ -1.58
PDZRN3Q9UPQ7 GALP-203ENST00000590002 150 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PDZRN3Q9UPQ7 AC004467.1-201ENST00000615678 330 ntBASIC5.2□□□□□ -1.58
PDZRN3Q9UPQ7 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC5.2□□□□□ -1.58
PDZRN3Q9UPQ7 MIR7702-201ENST00000621931 59 ntBASIC5.2□□□□□ -1.58
PDZRN3Q9UPQ7 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC5.2□□□□□ -1.58
PDZRN3Q9UPQ7 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC5.2□□□□□ -1.58
PDZRN3Q9UPQ7 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PDZRN3Q9UPQ7 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PDZRN3Q9UPQ7 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PDZRN3Q9UPQ7 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PDZRN3Q9UPQ7 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PDZRN3Q9UPQ7 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDZRN3Q9UPQ7 CEP70-211ENST00000484888 1993 ntAPPRIS P3 TSL 5 BASIC5.19□□□□□ -1.58
PDZRN3Q9UPQ7 SNORA60-201ENST00000362396 134 ntBASIC5.19□□□□□ -1.58
PDZRN3Q9UPQ7 Y_RNA.163-201ENST00000363702 113 ntBASIC5.19□□□□□ -1.58
PDZRN3Q9UPQ7 U8.10-201ENST00000384260 133 ntBASIC5.19□□□□□ -1.58
PDZRN3Q9UPQ7 MIR1255A-201ENST00000408338 113 ntBASIC5.19□□□□□ -1.58
PDZRN3Q9UPQ7 MLLT10P1-201ENST00000418346 262 ntBASIC5.19□□□□□ -1.58
PDZRN3Q9UPQ7 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC5.19□□□□□ -1.58
PDZRN3Q9UPQ7 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC5.19□□□□□ -1.58
PDZRN3Q9UPQ7 AC090774.1-201ENST00000435925 246 ntBASIC5.19□□□□□ -1.58
PDZRN3Q9UPQ7 AL135790.2-201ENST00000437701 267 ntBASIC5.19□□□□□ -1.58
PDZRN3Q9UPQ7 RPL39P29-201ENST00000447779 157 ntBASIC5.19□□□□□ -1.58
PDZRN3Q9UPQ7 AC025445.1-201ENST00000502728 300 ntBASIC5.19□□□□□ -1.58
PDZRN3Q9UPQ7 AC010265.1-201ENST00000513509 211 ntBASIC5.19□□□□□ -1.58
PDZRN3Q9UPQ7 RN7SKP19-201ENST00000516016 252 ntBASIC5.19□□□□□ -1.58
PDZRN3Q9UPQ7 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.19□□□□□ -1.58
PDZRN3Q9UPQ7 AC091178.2-201ENST00000584401 117 ntBASIC5.19□□□□□ -1.58
PDZRN3Q9UPQ7 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC5.19□□□□□ -1.58
PDZRN3Q9UPQ7 AC091932.3-201ENST00000624223 323 ntBASIC5.19□□□□□ -1.58
PDZRN3Q9UPQ7 MIR4496-201ENST00000635896 61 ntBASIC5.19□□□□□ -1.58
PDZRN3Q9UPQ7 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
PDZRN3Q9UPQ7 AC087190.4-201ENST00000574616 8334 ntBASIC5.19□□□□□ -1.58
PDZRN3Q9UPQ7 ZNF28-203ENST00000438150 5171 ntTSL 2 BASIC5.19□□□□□ -1.58
PDZRN3Q9UPQ7 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
PDZRN3Q9UPQ7 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC5.19□□□□□ -1.58
PDZRN3Q9UPQ7 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC5.18□□□□□ -1.58
PDZRN3Q9UPQ7 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC5.18□□□□□ -1.58
PDZRN3Q9UPQ7 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
PDZRN3Q9UPQ7 UBE2L2-201ENST00000254302 429 ntBASIC5.18□□□□□ -1.58
PDZRN3Q9UPQ7 U3.9-201ENST00000363823 204 ntBASIC5.18□□□□□ -1.58
PDZRN3Q9UPQ7 Y_RNA.329-201ENST00000365209 107 ntBASIC5.18□□□□□ -1.58
PDZRN3Q9UPQ7 Y_RNA.346-201ENST00000365385 112 ntBASIC5.18□□□□□ -1.58
PDZRN3Q9UPQ7 U3.15-201ENST00000365398 212 ntBASIC5.18□□□□□ -1.58
PDZRN3Q9UPQ7 Y_RNA.466-201ENST00000384294 113 ntBASIC5.18□□□□□ -1.58
PDZRN3Q9UPQ7 MIR487A-201ENST00000385009 80 ntBASIC5.18□□□□□ -1.58
PDZRN3Q9UPQ7 MIR301A-201ENST00000385261 86 ntBASIC5.18□□□□□ -1.58
PDZRN3Q9UPQ7 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC5.18□□□□□ -1.58
PDZRN3Q9UPQ7 AP001043.2-201ENST00000434589 288 ntTSL 3 BASIC5.18□□□□□ -1.58
PDZRN3Q9UPQ7 RPS26P15-201ENST00000488067 348 ntBASIC5.18□□□□□ -1.58
PDZRN3Q9UPQ7 AC055733.2-201ENST00000504737 340 ntTSL 2 BASIC5.18□□□□□ -1.58
PDZRN3Q9UPQ7 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC5.18□□□□□ -1.58
PDZRN3Q9UPQ7 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC5.18□□□□□ -1.58
PDZRN3Q9UPQ7 AC019176.2-201ENST00000611579 315 ntBASIC5.18□□□□□ -1.58
PDZRN3Q9UPQ7 AC009831.4-201ENST00000620744 325 ntBASIC5.18□□□□□ -1.58
PDZRN3Q9UPQ7 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC5.18□□□□□ -1.58
PDZRN3Q9UPQ7 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
PDZRN3Q9UPQ7 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
PDZRN3Q9UPQ7 AL353743.1-202ENST00000431724 1695 ntBASIC5.18□□□□□ -1.58
PDZRN3Q9UPQ7 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC5.17□□□□□ -1.58
PDZRN3Q9UPQ7 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDZRN3Q9UPQ7 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDZRN3Q9UPQ7 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
PDZRN3Q9UPQ7 RNY1P10-201ENST00000363268 113 ntBASIC5.17□□□□□ -1.58
PDZRN3Q9UPQ7 Y_RNA.220-201ENST00000364244 109 ntBASIC5.17□□□□□ -1.58
PDZRN3Q9UPQ7 RNU6-597P-201ENST00000365620 102 ntBASIC5.17□□□□□ -1.58
PDZRN3Q9UPQ7 RNU6-440P-201ENST00000390882 105 ntBASIC5.17□□□□□ -1.58
PDZRN3Q9UPQ7 RNU6-788P-201ENST00000390967 104 ntBASIC5.17□□□□□ -1.58
PDZRN3Q9UPQ7 RNU2-54P-201ENST00000410299 190 ntBASIC5.17□□□□□ -1.58
PDZRN3Q9UPQ7 SNORA57.3-201ENST00000411095 141 ntBASIC5.17□□□□□ -1.58
PDZRN3Q9UPQ7 AL158156.1-201ENST00000422509 473 ntBASIC5.17□□□□□ -1.58
PDZRN3Q9UPQ7 AL691449.1-201ENST00000426570 421 ntBASIC5.17□□□□□ -1.58
PDZRN3Q9UPQ7 AC010095.1-201ENST00000443543 144 ntBASIC5.17□□□□□ -1.58
PDZRN3Q9UPQ7 RNU6-58P-201ENST00000517143 103 ntBASIC5.17□□□□□ -1.58
PDZRN3Q9UPQ7 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC5.17□□□□□ -1.58
PDZRN3Q9UPQ7 PRELID2P1-201ENST00000552837 301 ntBASIC5.17□□□□□ -1.58
PDZRN3Q9UPQ7 AC022655.2-201ENST00000577280 318 ntBASIC5.17□□□□□ -1.58
PDZRN3Q9UPQ7 AL121772.2-201ENST00000614331 297 ntBASIC5.17□□□□□ -1.58
PDZRN3Q9UPQ7 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
PDZRN3Q9UPQ7 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PDZRN3Q9UPQ7 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC5.17□□□□□ -1.58
PDZRN3Q9UPQ7 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
PDZRN3Q9UPQ7 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
PDZRN3Q9UPQ7 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDZRN3Q9UPQ7 Y_RNA.120-201ENST00000363304 110 ntBASIC5.16□□□□□ -1.58
PDZRN3Q9UPQ7 RNU6-137P-201ENST00000363680 108 ntBASIC5.16□□□□□ -1.58
PDZRN3Q9UPQ7 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
PDZRN3Q9UPQ7 AL606845.1-201ENST00000404881 255 ntBASIC5.16□□□□□ -1.58
PDZRN3Q9UPQ7 SNORA3C-201ENST00000408792 125 ntBASIC5.16□□□□□ -1.58
PDZRN3Q9UPQ7 RPL26P27-201ENST00000414397 437 ntBASIC5.16□□□□□ -1.58
PDZRN3Q9UPQ7 AC092447.6-201ENST00000414578 210 ntBASIC5.16□□□□□ -1.58
PDZRN3Q9UPQ7 AC136628.3-201ENST00000521868 290 ntBASIC5.16□□□□□ -1.58
PDZRN3Q9UPQ7 AC084851.1-201ENST00000529105 249 ntBASIC5.16□□□□□ -1.58
PDZRN3Q9UPQ7 CYCSP30-201ENST00000546447 172 ntBASIC5.16□□□□□ -1.58
PDZRN3Q9UPQ7 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC5.16□□□□□ -1.58
PDZRN3Q9UPQ7 AC120024.3-201ENST00000603167 156 ntBASIC5.16□□□□□ -1.58
PDZRN3Q9UPQ7 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
PDZRN3Q9UPQ7 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms