Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 Y_RNA.132-201ENST00000363421 102 ntBASIC2.63□□□□□ -1.99
SIX4Q9UIU6 RNU6-1280P-201ENST00000365211 107 ntBASIC2.63□□□□□ -1.99
SIX4Q9UIU6 RNU1-109P-201ENST00000383960 147 ntBASIC2.63□□□□□ -1.99
SIX4Q9UIU6 RNU6-890P-201ENST00000384121 107 ntBASIC2.63□□□□□ -1.99
SIX4Q9UIU6 RNU6-933P-201ENST00000384424 107 ntBASIC2.63□□□□□ -1.99
SIX4Q9UIU6 SNORD116-20-201ENST00000384529 92 ntBASIC2.63□□□□□ -1.99
SIX4Q9UIU6 RNU6-1106P-201ENST00000390845 107 ntBASIC2.63□□□□□ -1.99
SIX4Q9UIU6 AL513475.1-201ENST00000406602 315 ntBASIC2.63□□□□□ -1.99
SIX4Q9UIU6 RPL19P1-201ENST00000411635 428 ntBASIC2.63□□□□□ -1.99
SIX4Q9UIU6 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.63□□□□□ -1.99
SIX4Q9UIU6 DAP3P1-201ENST00000441522 278 ntBASIC2.63□□□□□ -1.99
SIX4Q9UIU6 ELOCP24-201ENST00000456370 334 ntBASIC2.63□□□□□ -1.99
SIX4Q9UIU6 AC093303.1-201ENST00000514549 295 ntBASIC2.63□□□□□ -1.99
SIX4Q9UIU6 RNA5SP384-201ENST00000516615 116 ntBASIC2.63□□□□□ -1.99
SIX4Q9UIU6 AC022634.1-201ENST00000520765 532 ntBASIC2.63□□□□□ -1.99
SIX4Q9UIU6 AP000889.1-201ENST00000530968 660 ntBASIC2.63□□□□□ -1.99
SIX4Q9UIU6 AC109446.1-201ENST00000566172 220 ntBASIC2.63□□□□□ -1.99
SIX4Q9UIU6 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.63□□□□□ -1.99
SIX4Q9UIU6 PISRT1.1-201ENST00000616930 107 ntBASIC2.63□□□□□ -1.99
SIX4Q9UIU6 AC007742.2-201ENST00000618226 398 ntBASIC2.63□□□□□ -1.99
SIX4Q9UIU6 DLEU2_6.2-201ENST00000620994 136 ntBASIC2.63□□□□□ -1.99
SIX4Q9UIU6 AC090971.5-201ENST00000621102 293 ntBASIC2.63□□□□□ -1.99
SIX4Q9UIU6 MIR3199-2-201ENST00000636243 86 ntBASIC2.63□□□□□ -1.99
SIX4Q9UIU6 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SIX4Q9UIU6 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.63□□□□□ -1.99
SIX4Q9UIU6 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.62□□□□□ -1.99
SIX4Q9UIU6 RNA5SP289-201ENST00000362332 137 ntBASIC2.62□□□□□ -1.99
SIX4Q9UIU6 RNU6-858P-201ENST00000362436 107 ntBASIC2.62□□□□□ -1.99
SIX4Q9UIU6 SNORD42.2-201ENST00000365570 69 ntBASIC2.62□□□□□ -1.99
SIX4Q9UIU6 RNU6-331P-201ENST00000384724 107 ntBASIC2.62□□□□□ -1.99
SIX4Q9UIU6 RPS29P13-201ENST00000402041 169 ntBASIC2.62□□□□□ -1.99
SIX4Q9UIU6 AL513477.1-202ENST00000417061 214 ntBASIC2.62□□□□□ -1.99
SIX4Q9UIU6 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.62□□□□□ -1.99
SIX4Q9UIU6 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.62□□□□□ -1.99
SIX4Q9UIU6 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC2.62□□□□□ -1.99
SIX4Q9UIU6 AL161651.1-201ENST00000440882 223 ntBASIC2.62□□□□□ -1.99
SIX4Q9UIU6 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC2.62□□□□□ -1.99
SIX4Q9UIU6 RPL23AP49-201ENST00000492925 468 ntBASIC2.62□□□□□ -1.99
SIX4Q9UIU6 RNU6-1170P-201ENST00000515974 106 ntBASIC2.62□□□□□ -1.99
SIX4Q9UIU6 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.62□□□□□ -1.99
SIX4Q9UIU6 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC2.62□□□□□ -1.99
SIX4Q9UIU6 AC004852.3-201ENST00000614131 326 ntBASIC2.62□□□□□ -1.99
SIX4Q9UIU6 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.62□□□□□ -1.99
SIX4Q9UIU6 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.62□□□□□ -1.99
SIX4Q9UIU6 CTSLP2-204ENST00000629029 392 ntBASIC2.62□□□□□ -1.99
SIX4Q9UIU6 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
SIX4Q9UIU6 AC016717.2-201ENST00000609089 5141 ntBASIC2.62□□□□□ -1.99
SIX4Q9UIU6 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
SIX4Q9UIU6 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.62□□□□□ -1.99
SIX4Q9UIU6 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.61□□□□□ -1.99
SIX4Q9UIU6 Y_RNA.2-201ENST00000362330 96 ntBASIC2.61□□□□□ -1.99
SIX4Q9UIU6 RNU6-527P-201ENST00000363425 104 ntBASIC2.61□□□□□ -1.99
SIX4Q9UIU6 Y_RNA.187-201ENST00000363918 113 ntBASIC2.61□□□□□ -1.99
SIX4Q9UIU6 U8.8-201ENST00000365399 135 ntBASIC2.61□□□□□ -1.99
SIX4Q9UIU6 MIR521-1-201ENST00000384902 87 ntBASIC2.61□□□□□ -1.99
SIX4Q9UIU6 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SIX4Q9UIU6 MTND3P9-201ENST00000429526 346 ntBASIC2.61□□□□□ -1.99
SIX4Q9UIU6 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.61□□□□□ -1.99
SIX4Q9UIU6 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
SIX4Q9UIU6 MTCYBP6-201ENST00000441810 138 ntBASIC2.61□□□□□ -1.99
SIX4Q9UIU6 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.61□□□□□ -1.99
SIX4Q9UIU6 Y_RNA.639-201ENST00000458981 102 ntBASIC2.61□□□□□ -1.99
SIX4Q9UIU6 MIR2053-201ENST00000459295 91 ntBASIC2.61□□□□□ -1.99
SIX4Q9UIU6 U8.21-201ENST00000459536 136 ntBASIC2.61□□□□□ -1.99
SIX4Q9UIU6 AKIRIN2P1-201ENST00000505898 352 ntBASIC2.61□□□□□ -1.99
SIX4Q9UIU6 SEM1P1-201ENST00000506694 209 ntBASIC2.61□□□□□ -1.99
SIX4Q9UIU6 AC097473.1-201ENST00000508142 408 ntBASIC2.61□□□□□ -1.99
SIX4Q9UIU6 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC2.61□□□□□ -1.99
SIX4Q9UIU6 RAC1P5-201ENST00000512182 576 ntBASIC2.61□□□□□ -1.99
SIX4Q9UIU6 RNU6-120P-201ENST00000516077 103 ntBASIC2.61□□□□□ -1.99
SIX4Q9UIU6 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.61□□□□□ -1.99
SIX4Q9UIU6 SCARNA16.2-201ENST00000516520 172 ntBASIC2.61□□□□□ -1.99
SIX4Q9UIU6 RNU6-612P-201ENST00000516909 102 ntBASIC2.61□□□□□ -1.99
SIX4Q9UIU6 ACA59.2-201ENST00000517061 156 ntBASIC2.61□□□□□ -1.99
SIX4Q9UIU6 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC2.61□□□□□ -1.99
SIX4Q9UIU6 AL080274.1-201ENST00000605565 220 ntBASIC2.61□□□□□ -1.99
SIX4Q9UIU6 AC103810.6-201ENST00000606708 136 ntBASIC2.61□□□□□ -1.99
SIX4Q9UIU6 AC110079.1-202ENST00000635213 138 ntBASIC2.61□□□□□ -1.99
SIX4Q9UIU6 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
SIX4Q9UIU6 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
SIX4Q9UIU6 Y_RNA.146-201ENST00000363549 102 ntBASIC2.6□□□□□ -1.99
SIX4Q9UIU6 RNU6-1227P-201ENST00000383981 107 ntBASIC2.6□□□□□ -1.99
SIX4Q9UIU6 RNU6-692P-201ENST00000384496 107 ntBASIC2.6□□□□□ -1.99
SIX4Q9UIU6 MIR1302-11-201ENST00000408051 138 ntBASIC2.6□□□□□ -1.99
SIX4Q9UIU6 MIR1302-9-201ENST00000408365 138 ntBASIC2.6□□□□□ -1.99
SIX4Q9UIU6 MIR1302-10-201ENST00000408734 138 ntBASIC2.6□□□□□ -1.99
SIX4Q9UIU6 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.6□□□□□ -1.99
SIX4Q9UIU6 USMG5P1-201ENST00000425964 177 ntBASIC2.6□□□□□ -1.99
SIX4Q9UIU6 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.6□□□□□ -1.99
SIX4Q9UIU6 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC2.6□□□□□ -1.99
SIX4Q9UIU6 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC2.6□□□□□ -1.99
SIX4Q9UIU6 AC006026.2-201ENST00000457376 180 ntBASIC2.6□□□□□ -1.99
SIX4Q9UIU6 RPS29P27-201ENST00000463711 170 ntBASIC2.6□□□□□ -1.99
SIX4Q9UIU6 AC008571.1-201ENST00000467232 300 ntBASIC2.6□□□□□ -1.99
SIX4Q9UIU6 MED28P2-201ENST00000475771 317 ntBASIC2.6□□□□□ -1.99
SIX4Q9UIU6 FO393415.2-201ENST00000480085 343 ntBASIC2.6□□□□□ -1.99
SIX4Q9UIU6 LINC01997-201ENST00000494900 429 ntTSL 2 BASIC2.6□□□□□ -1.99
SIX4Q9UIU6 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.6□□□□□ -1.99
SIX4Q9UIU6 SNORA31.18-201ENST00000517043 134 ntBASIC2.6□□□□□ -1.99
SIX4Q9UIU6 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms