Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 RNU6-227P-201ENST00000362865 103 ntBASIC3.18□□□□□ -1.9
DKK3Q9UBP4 SNORD50.1-201ENST00000362987 71 ntBASIC3.18□□□□□ -1.9
DKK3Q9UBP4 VTRNA1-1-201ENST00000363120 99 ntBASIC3.18□□□□□ -1.9
DKK3Q9UBP4 Y_RNA.149-201ENST00000363558 117 ntBASIC3.18□□□□□ -1.9
DKK3Q9UBP4 Y_RNA.153-201ENST00000363615 91 ntBASIC3.18□□□□□ -1.9
DKK3Q9UBP4 Y_RNA.314-201ENST00000365114 102 ntBASIC3.18□□□□□ -1.9
DKK3Q9UBP4 Y_RNA.380-201ENST00000365663 111 ntBASIC3.18□□□□□ -1.9
DKK3Q9UBP4 RNU6-784P-201ENST00000384330 106 ntBASIC3.18□□□□□ -1.9
DKK3Q9UBP4 Y_RNA.533-201ENST00000384596 114 ntBASIC3.18□□□□□ -1.9
DKK3Q9UBP4 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
DKK3Q9UBP4 AC096644.2-201ENST00000429278 159 ntBASIC3.18□□□□□ -1.9
DKK3Q9UBP4 HMGN1P18-201ENST00000457642 277 ntBASIC3.18□□□□□ -1.9
DKK3Q9UBP4 AC006445.1-201ENST00000491925 405 ntBASIC3.18□□□□□ -1.9
DKK3Q9UBP4 AC093852.1-201ENST00000503587 266 ntBASIC3.18□□□□□ -1.9
DKK3Q9UBP4 AC105758.1-201ENST00000506038 399 ntBASIC3.18□□□□□ -1.9
DKK3Q9UBP4 AC022616.4-201ENST00000522985 181 ntBASIC3.18□□□□□ -1.9
DKK3Q9UBP4 AP004607.1-201ENST00000524456 203 ntBASIC3.18□□□□□ -1.9
DKK3Q9UBP4 AC004817.2-201ENST00000561794 651 ntBASIC3.18□□□□□ -1.9
DKK3Q9UBP4 MIR4503-201ENST00000582187 83 ntBASIC3.18□□□□□ -1.9
DKK3Q9UBP4 MIR3609-201ENST00000582661 80 ntBASIC3.18□□□□□ -1.9
DKK3Q9UBP4 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.18□□□□□ -1.9
DKK3Q9UBP4 AC009318.2-201ENST00000610917 651 ntBASIC3.18□□□□□ -1.9
DKK3Q9UBP4 MIR6134-201ENST00000617606 109 ntBASIC3.18□□□□□ -1.9
DKK3Q9UBP4 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.18□□□□□ -1.9
DKK3Q9UBP4 MIR4272-201ENST00000635924 64 ntBASIC3.18□□□□□ -1.9
DKK3Q9UBP4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
DKK3Q9UBP4 AC099654.7-201ENST00000635788 2127 ntBASIC3.17□□□□□ -1.9
DKK3Q9UBP4 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
DKK3Q9UBP4 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
DKK3Q9UBP4 RNU6-942P-201ENST00000363002 107 ntBASIC3.17□□□□□ -1.9
DKK3Q9UBP4 SNORD56.3-201ENST00000363507 71 ntBASIC3.17□□□□□ -1.9
DKK3Q9UBP4 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.17□□□□□ -1.9
DKK3Q9UBP4 Y_RNA.452-201ENST00000384202 108 ntBASIC3.17□□□□□ -1.9
DKK3Q9UBP4 RNU6-658P-201ENST00000384606 106 ntBASIC3.17□□□□□ -1.9
DKK3Q9UBP4 RNU6-823P-201ENST00000391042 103 ntBASIC3.17□□□□□ -1.9
DKK3Q9UBP4 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.17□□□□□ -1.9
DKK3Q9UBP4 AL353752.1-201ENST00000454946 260 ntBASIC3.17□□□□□ -1.9
DKK3Q9UBP4 AC010099.1-201ENST00000455434 375 ntBASIC3.17□□□□□ -1.9
DKK3Q9UBP4 RPL30P10-201ENST00000488148 337 ntBASIC3.17□□□□□ -1.9
DKK3Q9UBP4 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC3.17□□□□□ -1.9
DKK3Q9UBP4 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC3.17□□□□□ -1.9
DKK3Q9UBP4 SNORA43.2-201ENST00000516652 128 ntBASIC3.17□□□□□ -1.9
DKK3Q9UBP4 COX6CP5-201ENST00000527162 228 ntBASIC3.17□□□□□ -1.9
DKK3Q9UBP4 AC010186.2-204ENST00000537668 439 ntBASIC3.17□□□□□ -1.9
DKK3Q9UBP4 AC008269.2-201ENST00000561915 1105 ntBASIC3.17□□□□□ -1.9
DKK3Q9UBP4 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.17□□□□□ -1.9
DKK3Q9UBP4 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.17□□□□□ -1.9
DKK3Q9UBP4 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.17□□□□□ -1.9
DKK3Q9UBP4 RPL12P50-201ENST00000603116 116 ntBASIC3.17□□□□□ -1.9
DKK3Q9UBP4 Z98751.3-201ENST00000604447 521 ntBASIC3.17□□□□□ -1.9
DKK3Q9UBP4 AC138305.3-201ENST00000624988 240 ntBASIC3.17□□□□□ -1.9
DKK3Q9UBP4 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
DKK3Q9UBP4 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.17□□□□□ -1.9
DKK3Q9UBP4 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
DKK3Q9UBP4 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
DKK3Q9UBP4 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
DKK3Q9UBP4 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
DKK3Q9UBP4 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
DKK3Q9UBP4 U3.6-201ENST00000363622 211 ntBASIC3.16□□□□□ -1.9
DKK3Q9UBP4 SNORA5B-201ENST00000363786 132 ntBASIC3.16□□□□□ -1.9
DKK3Q9UBP4 Y_RNA.176-201ENST00000363815 109 ntBASIC3.16□□□□□ -1.9
DKK3Q9UBP4 RNU6-884P-201ENST00000363889 107 ntBASIC3.16□□□□□ -1.9
DKK3Q9UBP4 RNU6-105P-201ENST00000363909 104 ntBASIC3.16□□□□□ -1.9
DKK3Q9UBP4 RNU4-42P-201ENST00000364738 142 ntBASIC3.16□□□□□ -1.9
DKK3Q9UBP4 Y_RNA.389-201ENST00000383924 113 ntBASIC3.16□□□□□ -1.9
DKK3Q9UBP4 RNU1-109P-201ENST00000383960 147 ntBASIC3.16□□□□□ -1.9
DKK3Q9UBP4 Y_RNA.424-201ENST00000384063 103 ntBASIC3.16□□□□□ -1.9
DKK3Q9UBP4 Y_RNA.485-201ENST00000384395 102 ntBASIC3.16□□□□□ -1.9
DKK3Q9UBP4 MIR625-201ENST00000385047 85 ntBASIC3.16□□□□□ -1.9
DKK3Q9UBP4 NPS-201ENST00000398023 270 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
DKK3Q9UBP4 RNU6-101P-201ENST00000410323 104 ntBASIC3.16□□□□□ -1.9
DKK3Q9UBP4 AP000275.1-201ENST00000411943 390 ntBASIC3.16□□□□□ -1.9
DKK3Q9UBP4 AC073325.1-201ENST00000443714 542 ntTSL 4 BASIC3.16□□□□□ -1.9
DKK3Q9UBP4 AC124916.1-201ENST00000444020 547 ntBASIC3.16□□□□□ -1.9
DKK3Q9UBP4 AC079354.2-201ENST00000453523 154 ntBASIC3.16□□□□□ -1.9
DKK3Q9UBP4 U8.20-201ENST00000459445 131 ntBASIC3.16□□□□□ -1.9
DKK3Q9UBP4 S100A11P2-201ENST00000467589 312 ntBASIC3.16□□□□□ -1.9
DKK3Q9UBP4 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC3.16□□□□□ -1.9
DKK3Q9UBP4 SEM1P1-201ENST00000506694 209 ntBASIC3.16□□□□□ -1.9
DKK3Q9UBP4 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC3.16□□□□□ -1.9
DKK3Q9UBP4 NACAP3-201ENST00000552100 481 ntBASIC3.16□□□□□ -1.9
DKK3Q9UBP4 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC3.16□□□□□ -1.9
DKK3Q9UBP4 AL355297.3-201ENST00000604082 446 ntBASIC3.16□□□□□ -1.9
DKK3Q9UBP4 AC091903.1-201ENST00000624322 454 ntBASIC3.16□□□□□ -1.9
DKK3Q9UBP4 AC110079.1-202ENST00000635213 138 ntBASIC3.16□□□□□ -1.9
DKK3Q9UBP4 AC138915.1-201ENST00000565427 1685 ntBASIC3.15□□□□□ -1.9
DKK3Q9UBP4 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.15□□□□□ -1.9
DKK3Q9UBP4 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.15□□□□□ -1.91
DKK3Q9UBP4 Y_RNA.47-201ENST00000362697 108 ntBASIC3.15□□□□□ -1.91
DKK3Q9UBP4 SNORA80A-201ENST00000363922 136 ntBASIC3.15□□□□□ -1.91
DKK3Q9UBP4 RNU6-270P-201ENST00000364131 105 ntBASIC3.15□□□□□ -1.91
DKK3Q9UBP4 SNORD15B-201ENST00000384714 146 ntBASIC3.15□□□□□ -1.91
DKK3Q9UBP4 RPL21P3-201ENST00000395517 478 ntBASIC3.15□□□□□ -1.91
DKK3Q9UBP4 MTCYBP2-201ENST00000407745 171 ntBASIC3.15□□□□□ -1.91
DKK3Q9UBP4 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
DKK3Q9UBP4 MTND3P9-201ENST00000429526 346 ntBASIC3.15□□□□□ -1.91
DKK3Q9UBP4 CHEK2P4-201ENST00000450340 246 ntBASIC3.15□□□□□ -1.91
DKK3Q9UBP4 MTATP8P1-201ENST00000467115 207 ntBASIC3.15□□□□□ -1.91
DKK3Q9UBP4 SNORA31.18-201ENST00000517043 134 ntBASIC3.15□□□□□ -1.91
DKK3Q9UBP4 AC144568.1-201ENST00000520139 137 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms