Protein–RNA interactions for Protein: Q9P0J7

KCMF1, E3 ubiquitin-protein ligase KCMF1, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCMF1Q9P0J7 AC137590.2-201ENST00000619709 240 ntBASIC3.33□□□□□ -1.88
KCMF1Q9P0J7 AC078938.1-201ENST00000620993 318 ntBASIC3.33□□□□□ -1.88
KCMF1Q9P0J7 U4.6-201ENST00000621618 127 ntBASIC3.33□□□□□ -1.88
KCMF1Q9P0J7 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
KCMF1Q9P0J7 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
KCMF1Q9P0J7 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
KCMF1Q9P0J7 AC007256.1-201ENST00000392253 2765 ntBASIC3.33□□□□□ -1.88
KCMF1Q9P0J7 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.33□□□□□ -1.88
KCMF1Q9P0J7 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
KCMF1Q9P0J7 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.32□□□□□ -1.88
KCMF1Q9P0J7 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.32□□□□□ -1.88
KCMF1Q9P0J7 MFSD8-233ENST00000641482 4860 ntBASIC3.32□□□□□ -1.88
KCMF1Q9P0J7 RNA5SP361-201ENST00000362686 118 ntBASIC3.32□□□□□ -1.88
KCMF1Q9P0J7 RNU6-318P-201ENST00000384283 103 ntBASIC3.32□□□□□ -1.88
KCMF1Q9P0J7 RNU1-139P-201ENST00000391307 165 ntBASIC3.32□□□□□ -1.88
KCMF1Q9P0J7 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.32□□□□□ -1.88
KCMF1Q9P0J7 RNU2-25P-201ENST00000411041 191 ntBASIC3.32□□□□□ -1.88
KCMF1Q9P0J7 AL590135.1-201ENST00000422215 156 ntBASIC3.32□□□□□ -1.88
KCMF1Q9P0J7 AC019205.3-201ENST00000424573 156 ntBASIC3.32□□□□□ -1.88
KCMF1Q9P0J7 WARS2P1-201ENST00000429678 537 ntBASIC3.32□□□□□ -1.88
KCMF1Q9P0J7 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC3.32□□□□□ -1.88
KCMF1Q9P0J7 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.32□□□□□ -1.88
KCMF1Q9P0J7 RPL39P38-201ENST00000467018 153 ntBASIC3.32□□□□□ -1.88
KCMF1Q9P0J7 RPL7P49-201ENST00000471402 708 ntBASIC3.32□□□□□ -1.88
KCMF1Q9P0J7 AC107222.1-201ENST00000510899 637 ntBASIC3.32□□□□□ -1.88
KCMF1Q9P0J7 NDUFB9P3-201ENST00000521269 501 ntBASIC3.32□□□□□ -1.88
KCMF1Q9P0J7 AC021231.3-201ENST00000558497 370 ntBASIC3.32□□□□□ -1.88
KCMF1Q9P0J7 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.32□□□□□ -1.88
KCMF1Q9P0J7 MIR4425-201ENST00000580572 84 ntBASIC3.32□□□□□ -1.88
KCMF1Q9P0J7 MIR4300-201ENST00000581016 96 ntBASIC3.32□□□□□ -1.88
KCMF1Q9P0J7 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC3.32□□□□□ -1.88
KCMF1Q9P0J7 CENPF-206ENST00000614578 528 ntTSL 5 BASIC3.32□□□□□ -1.88
KCMF1Q9P0J7 AC005296.1-201ENST00000616145 209 ntBASIC3.32□□□□□ -1.88
KCMF1Q9P0J7 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC3.32□□□□□ -1.88
KCMF1Q9P0J7 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.31□□□□□ -1.88
KCMF1Q9P0J7 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
KCMF1Q9P0J7 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
KCMF1Q9P0J7 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
KCMF1Q9P0J7 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
KCMF1Q9P0J7 PLPPR4-201ENST00000370184 4505 ntTSL 5 BASIC3.31□□□□□ -1.88
KCMF1Q9P0J7 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.31□□□□□ -1.88
KCMF1Q9P0J7 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
KCMF1Q9P0J7 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
KCMF1Q9P0J7 RNU6-1159P-201ENST00000362933 107 ntBASIC3.31□□□□□ -1.88
KCMF1Q9P0J7 Y_RNA.84-201ENST00000363011 104 ntBASIC3.31□□□□□ -1.88
KCMF1Q9P0J7 RNU6-1285P-201ENST00000363480 105 ntBASIC3.31□□□□□ -1.88
KCMF1Q9P0J7 MT-TR-201ENST00000387439 65 ntBASIC3.31□□□□□ -1.88
KCMF1Q9P0J7 SNORD115-46-201ENST00000390982 71 ntBASIC3.31□□□□□ -1.88
KCMF1Q9P0J7 EI24P2-201ENST00000397776 1076 ntBASIC3.31□□□□□ -1.88
KCMF1Q9P0J7 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC3.31□□□□□ -1.88
KCMF1Q9P0J7 AC096920.1-201ENST00000423991 241 ntBASIC3.31□□□□□ -1.88
KCMF1Q9P0J7 PRSS3P4-201ENST00000453323 162 ntBASIC3.31□□□□□ -1.88
KCMF1Q9P0J7 RN7SL293P-201ENST00000481765 281 ntBASIC3.31□□□□□ -1.88
KCMF1Q9P0J7 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC3.31□□□□□ -1.88
KCMF1Q9P0J7 SNORA31.16-201ENST00000516773 139 ntBASIC3.31□□□□□ -1.88
KCMF1Q9P0J7 SNORD19.2-201ENST00000516978 73 ntBASIC3.31□□□□□ -1.88
KCMF1Q9P0J7 MIR3944-201ENST00000581277 108 ntBASIC3.31□□□□□ -1.88
KCMF1Q9P0J7 DLX6-AS1_2.1-201ENST00000613701 207 ntBASIC3.31□□□□□ -1.88
KCMF1Q9P0J7 AC084757.4-201ENST00000616350 526 ntBASIC3.31□□□□□ -1.88
KCMF1Q9P0J7 SDR42E1P4-201ENST00000620894 481 ntBASIC3.31□□□□□ -1.88
KCMF1Q9P0J7 AC022149.2-201ENST00000621061 203 ntBASIC3.31□□□□□ -1.88
KCMF1Q9P0J7 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.31□□□□□ -1.88
KCMF1Q9P0J7 AC010680.1-201ENST00000590024 3590 ntBASIC3.31□□□□□ -1.88
KCMF1Q9P0J7 AC007496.3-201ENST00000624987 3443 ntBASIC3.31□□□□□ -1.88
KCMF1Q9P0J7 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
KCMF1Q9P0J7 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
KCMF1Q9P0J7 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
KCMF1Q9P0J7 AC010889.1-201ENST00000566193 2666 ntBASIC3.3□□□□□ -1.88
KCMF1Q9P0J7 GPRC6A-202ENST00000368549 2622 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
KCMF1Q9P0J7 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
KCMF1Q9P0J7 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.3□□□□□ -1.88
KCMF1Q9P0J7 SNORA63.1-201ENST00000362493 131 ntBASIC3.3□□□□□ -1.88
KCMF1Q9P0J7 Y_RNA.60-201ENST00000362831 98 ntBASIC3.3□□□□□ -1.88
KCMF1Q9P0J7 snoU2_19.2-201ENST00000363024 80 ntBASIC3.3□□□□□ -1.88
KCMF1Q9P0J7 Y_RNA.257-201ENST00000364596 102 ntBASIC3.3□□□□□ -1.88
KCMF1Q9P0J7 RNU6-748P-201ENST00000384648 107 ntBASIC3.3□□□□□ -1.88
KCMF1Q9P0J7 MIR10B-201ENST00000385011 110 ntBASIC3.3□□□□□ -1.88
KCMF1Q9P0J7 MIR147B-201ENST00000390185 80 ntBASIC3.3□□□□□ -1.88
KCMF1Q9P0J7 RNA5SP213-201ENST00000391031 106 ntBASIC3.3□□□□□ -1.88
KCMF1Q9P0J7 RNU6-1093P-201ENST00000391194 107 ntBASIC3.3□□□□□ -1.88
KCMF1Q9P0J7 RNU6-1203P-201ENST00000410703 110 ntBASIC3.3□□□□□ -1.88
KCMF1Q9P0J7 AC138623.1-201ENST00000418060 216 ntBASIC3.3□□□□□ -1.88
KCMF1Q9P0J7 AC096638.1-201ENST00000444678 216 ntBASIC3.3□□□□□ -1.88
KCMF1Q9P0J7 CYCSP35-201ENST00000451978 304 ntBASIC3.3□□□□□ -1.88
KCMF1Q9P0J7 AP000705.1-201ENST00000454567 350 ntBASIC3.3□□□□□ -1.88
KCMF1Q9P0J7 AL031183.1-201ENST00000457667 207 ntBASIC3.3□□□□□ -1.88
KCMF1Q9P0J7 HMGB1P35-201ENST00000503360 598 ntBASIC3.3□□□□□ -1.88
KCMF1Q9P0J7 MTND1P19-201ENST00000511780 315 ntBASIC3.3□□□□□ -1.88
KCMF1Q9P0J7 RNU6-58P-201ENST00000517143 103 ntBASIC3.3□□□□□ -1.88
KCMF1Q9P0J7 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC3.3□□□□□ -1.88
KCMF1Q9P0J7 AC105137.2-201ENST00000569073 466 ntBASIC3.3□□□□□ -1.88
KCMF1Q9P0J7 AC012433.1-201ENST00000588916 398 ntBASIC3.3□□□□□ -1.88
KCMF1Q9P0J7 AL078605.1-201ENST00000603529 500 ntBASIC3.3□□□□□ -1.88
KCMF1Q9P0J7 AL138963.2-201ENST00000605137 226 ntBASIC3.3□□□□□ -1.88
KCMF1Q9P0J7 MIR7851-201ENST00000610611 160 ntBASIC3.3□□□□□ -1.88
KCMF1Q9P0J7 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC3.3□□□□□ -1.88
KCMF1Q9P0J7 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
KCMF1Q9P0J7 AC002543.1-201ENST00000299783 1954 ntBASIC3.3□□□□□ -1.88
KCMF1Q9P0J7 LINC02555-201ENST00000563933 1951 ntBASIC3.3□□□□□ -1.88
KCMF1Q9P0J7 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms