Protein–RNA interactions for Protein: Q9NZI6

TFCP2L1, Transcription factor CP2-like protein 1, humanhuman

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFCP2L1Q9NZI6 TMEM167AP1-201ENST00000423409 219 ntBASIC3.17□□□□□ -1.9
TFCP2L1Q9NZI6 USMG5P1-201ENST00000425964 177 ntBASIC3.17□□□□□ -1.9
TFCP2L1Q9NZI6 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC3.17□□□□□ -1.9
TFCP2L1Q9NZI6 HMGN2P23-201ENST00000456759 269 ntBASIC3.17□□□□□ -1.9
TFCP2L1Q9NZI6 RPL9P9-202ENST00000466501 579 ntBASIC3.17□□□□□ -1.9
TFCP2L1Q9NZI6 RNU6-976P-201ENST00000516086 111 ntBASIC3.17□□□□□ -1.9
TFCP2L1Q9NZI6 SNORA9.3-201ENST00000516383 129 ntBASIC3.17□□□□□ -1.9
TFCP2L1Q9NZI6 RNU6-1282P-201ENST00000516735 96 ntBASIC3.17□□□□□ -1.9
TFCP2L1Q9NZI6 AC021269.2-201ENST00000532318 330 ntBASIC3.17□□□□□ -1.9
TFCP2L1Q9NZI6 AP001836.1-201ENST00000604675 523 ntBASIC3.17□□□□□ -1.9
TFCP2L1Q9NZI6 AC046143.2-201ENST00000609789 160 ntBASIC3.17□□□□□ -1.9
TFCP2L1Q9NZI6 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
TFCP2L1Q9NZI6 AL161431.1-201ENST00000618966 4205 ntBASIC3.16□□□□□ -1.9
TFCP2L1Q9NZI6 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
TFCP2L1Q9NZI6 Y_RNA.338-201ENST00000365320 114 ntBASIC3.16□□□□□ -1.9
TFCP2L1Q9NZI6 RNU6-658P-201ENST00000384606 106 ntBASIC3.16□□□□□ -1.9
TFCP2L1Q9NZI6 RNU6-174P-201ENST00000410406 106 ntBASIC3.16□□□□□ -1.9
TFCP2L1Q9NZI6 RNU6-293P-201ENST00000411259 106 ntBASIC3.16□□□□□ -1.9
TFCP2L1Q9NZI6 LINC01870-201ENST00000427042 390 ntTSL 3 BASIC3.16□□□□□ -1.9
TFCP2L1Q9NZI6 AL353997.1-201ENST00000432936 108 ntBASIC3.16□□□□□ -1.9
TFCP2L1Q9NZI6 AC098831.1-201ENST00000440661 216 ntBASIC3.16□□□□□ -1.9
TFCP2L1Q9NZI6 AC091153.2-202ENST00000441700 384 ntTSL 3 BASIC3.16□□□□□ -1.9
TFCP2L1Q9NZI6 AC025918.1-201ENST00000452467 383 ntTSL 3 BASIC3.16□□□□□ -1.9
TFCP2L1Q9NZI6 GSTA11P-201ENST00000452866 669 ntBASIC3.16□□□□□ -1.9
TFCP2L1Q9NZI6 RPS27P29-201ENST00000463110 252 ntBASIC3.16□□□□□ -1.9
TFCP2L1Q9NZI6 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.16□□□□□ -1.9
TFCP2L1Q9NZI6 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC3.16□□□□□ -1.9
TFCP2L1Q9NZI6 CBX3P8-201ENST00000532412 525 ntBASIC3.16□□□□□ -1.9
TFCP2L1Q9NZI6 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.16□□□□□ -1.9
TFCP2L1Q9NZI6 AC009314.1-201ENST00000603871 304 ntBASIC3.16□□□□□ -1.9
TFCP2L1Q9NZI6 MTND4LP5-201ENST00000605152 292 ntBASIC3.16□□□□□ -1.9
TFCP2L1Q9NZI6 AC006157.1-201ENST00000611750 366 ntBASIC3.16□□□□□ -1.9
TFCP2L1Q9NZI6 AC133104.2-201ENST00000615272 193 ntBASIC3.16□□□□□ -1.9
TFCP2L1Q9NZI6 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.16□□□□□ -1.9
TFCP2L1Q9NZI6 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.16□□□□□ -1.9
TFCP2L1Q9NZI6 AC091925.1-201ENST00000623204 462 ntBASIC3.16□□□□□ -1.9
TFCP2L1Q9NZI6 AC080128.1-201ENST00000474389 1917 ntBASIC3.16□□□□□ -1.9
TFCP2L1Q9NZI6 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.15□□□□□ -1.9
TFCP2L1Q9NZI6 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.15□□□□□ -1.9
TFCP2L1Q9NZI6 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC3.15□□□□□ -1.9
TFCP2L1Q9NZI6 Y_RNA.4-201ENST00000362333 112 ntBASIC3.15□□□□□ -1.91
TFCP2L1Q9NZI6 Y_RNA.252-201ENST00000364556 101 ntBASIC3.15□□□□□ -1.91
TFCP2L1Q9NZI6 RNU6-898P-201ENST00000365627 104 ntBASIC3.15□□□□□ -1.91
TFCP2L1Q9NZI6 RNU6-26P-201ENST00000383985 107 ntBASIC3.15□□□□□ -1.91
TFCP2L1Q9NZI6 MIR518D-201ENST00000385014 87 ntBASIC3.15□□□□□ -1.91
TFCP2L1Q9NZI6 RPS4XP3-201ENST00000398541 413 ntBASIC3.15□□□□□ -1.91
TFCP2L1Q9NZI6 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.15□□□□□ -1.91
TFCP2L1Q9NZI6 AC008267.5-201ENST00000424928 265 ntBASIC3.15□□□□□ -1.91
TFCP2L1Q9NZI6 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.15□□□□□ -1.91
TFCP2L1Q9NZI6 ARF4P2-201ENST00000430209 526 ntBASIC3.15□□□□□ -1.91
TFCP2L1Q9NZI6 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC3.15□□□□□ -1.91
TFCP2L1Q9NZI6 RPS12P2-201ENST00000439728 269 ntBASIC3.15□□□□□ -1.91
TFCP2L1Q9NZI6 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC3.15□□□□□ -1.91
TFCP2L1Q9NZI6 AC104389.3-201ENST00000445629 235 ntBASIC3.15□□□□□ -1.91
TFCP2L1Q9NZI6 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.15□□□□□ -1.91
TFCP2L1Q9NZI6 AC022447.4-201ENST00000504053 364 ntBASIC3.15□□□□□ -1.91
TFCP2L1Q9NZI6 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC3.15□□□□□ -1.91
TFCP2L1Q9NZI6 RNU6-988P-201ENST00000519081 107 ntBASIC3.15□□□□□ -1.91
TFCP2L1Q9NZI6 HTN3-202ENST00000526767 578 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.91
TFCP2L1Q9NZI6 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC3.15□□□□□ -1.91
TFCP2L1Q9NZI6 AC009163.5-201ENST00000575421 637 ntBASIC3.15□□□□□ -1.91
TFCP2L1Q9NZI6 MIR4680-201ENST00000580906 66 ntBASIC3.15□□□□□ -1.91
TFCP2L1Q9NZI6 HSPE1P7-201ENST00000604681 321 ntBASIC3.15□□□□□ -1.91
TFCP2L1Q9NZI6 AC005014.2-201ENST00000607795 599 ntBASIC3.15□□□□□ -1.91
TFCP2L1Q9NZI6 MIR6076-201ENST00000617521 113 ntBASIC3.15□□□□□ -1.91
TFCP2L1Q9NZI6 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
TFCP2L1Q9NZI6 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
TFCP2L1Q9NZI6 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.14□□□□□ -1.91
TFCP2L1Q9NZI6 U8.8-201ENST00000365399 135 ntBASIC3.14□□□□□ -1.91
TFCP2L1Q9NZI6 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.14□□□□□ -1.91
TFCP2L1Q9NZI6 RNU6-639P-201ENST00000384074 107 ntBASIC3.14□□□□□ -1.91
TFCP2L1Q9NZI6 RNU6-1032P-201ENST00000384100 107 ntBASIC3.14□□□□□ -1.91
TFCP2L1Q9NZI6 Y_RNA.459-201ENST00000384251 102 ntBASIC3.14□□□□□ -1.91
TFCP2L1Q9NZI6 RNU6-72P-201ENST00000384285 79 ntBASIC3.14□□□□□ -1.91
TFCP2L1Q9NZI6 AL513475.1-201ENST00000406602 315 ntBASIC3.14□□□□□ -1.91
TFCP2L1Q9NZI6 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.14□□□□□ -1.91
TFCP2L1Q9NZI6 RPL23AP50-201ENST00000434149 455 ntBASIC3.14□□□□□ -1.91
TFCP2L1Q9NZI6 RNU6-1037P-201ENST00000459571 107 ntBASIC3.14□□□□□ -1.91
TFCP2L1Q9NZI6 RPL23AP70-201ENST00000483361 460 ntBASIC3.14□□□□□ -1.91
TFCP2L1Q9NZI6 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC3.14□□□□□ -1.91
TFCP2L1Q9NZI6 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.14□□□□□ -1.91
TFCP2L1Q9NZI6 UBE2Q2P8-201ENST00000560644 102 ntBASIC3.14□□□□□ -1.91
TFCP2L1Q9NZI6 AC020895.1-201ENST00000595362 272 ntBASIC3.14□□□□□ -1.91
TFCP2L1Q9NZI6 AC136443.5-201ENST00000603741 370 ntBASIC3.14□□□□□ -1.91
TFCP2L1Q9NZI6 MAPK10-362ENST00000641864 4484 ntBASIC3.14□□□□□ -1.91
TFCP2L1Q9NZI6 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC3.14□□□□□ -1.91
TFCP2L1Q9NZI6 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
TFCP2L1Q9NZI6 RNU6-942P-201ENST00000363002 107 ntBASIC3.13□□□□□ -1.91
TFCP2L1Q9NZI6 Y_RNA.145-201ENST00000363527 102 ntBASIC3.13□□□□□ -1.91
TFCP2L1Q9NZI6 RNY3P11-201ENST00000364153 102 ntBASIC3.13□□□□□ -1.91
TFCP2L1Q9NZI6 RNU6-336P-201ENST00000364891 107 ntBASIC3.13□□□□□ -1.91
TFCP2L1Q9NZI6 Y_RNA.422-201ENST00000384054 114 ntBASIC3.13□□□□□ -1.91
TFCP2L1Q9NZI6 Y_RNA.533-201ENST00000384596 114 ntBASIC3.13□□□□□ -1.91
TFCP2L1Q9NZI6 SNORA1.3-201ENST00000384676 136 ntBASIC3.13□□□□□ -1.91
TFCP2L1Q9NZI6 Y_RNA.645-201ENST00000391229 102 ntBASIC3.13□□□□□ -1.91
TFCP2L1Q9NZI6 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.13□□□□□ -1.91
TFCP2L1Q9NZI6 CHEK2P4-201ENST00000450340 246 ntBASIC3.13□□□□□ -1.91
TFCP2L1Q9NZI6 AC013470.1-201ENST00000453438 462 ntBASIC3.13□□□□□ -1.91
TFCP2L1Q9NZI6 RPS29P27-201ENST00000463711 170 ntBASIC3.13□□□□□ -1.91
TFCP2L1Q9NZI6 RPL30P14-201ENST00000482744 348 ntBASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms