Protein–RNA interactions for Protein: Q9NT62

ATG3, Ubiquitin-like-conjugating enzyme ATG3, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3Q9NT62 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC4.36□□□□□ -1.71
ATG3Q9NT62 AC244205.2-202ENST00000635781 342 ntBASIC4.36□□□□□ -1.71
ATG3Q9NT62 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ATG3Q9NT62 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC4.36□□□□□ -1.71
ATG3Q9NT62 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC4.36□□□□□ -1.71
ATG3Q9NT62 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
ATG3Q9NT62 SLC30A6-204ENST00000406369 4589 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
ATG3Q9NT62 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.36□□□□□ -1.71
ATG3Q9NT62 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ATG3Q9NT62 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.35□□□□□ -1.71
ATG3Q9NT62 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ATG3Q9NT62 AC135776.4-201ENST00000624300 1904 ntBASIC4.35□□□□□ -1.71
ATG3Q9NT62 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ATG3Q9NT62 Y_RNA.33-201ENST00000362591 102 ntBASIC4.35□□□□□ -1.71
ATG3Q9NT62 RNU5A-1-201ENST00000362698 116 ntBASIC4.35□□□□□ -1.71
ATG3Q9NT62 Y_RNA.123-201ENST00000363338 102 ntBASIC4.35□□□□□ -1.71
ATG3Q9NT62 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.35□□□□□ -1.71
ATG3Q9NT62 RNU6-318P-201ENST00000384283 103 ntBASIC4.35□□□□□ -1.71
ATG3Q9NT62 Y_RNA.500-201ENST00000384466 111 ntBASIC4.35□□□□□ -1.71
ATG3Q9NT62 RNU6-1035P-201ENST00000384477 107 ntBASIC4.35□□□□□ -1.71
ATG3Q9NT62 SNORD20-201ENST00000384550 80 ntBASIC4.35□□□□□ -1.71
ATG3Q9NT62 RNU4-47P-201ENST00000410876 114 ntBASIC4.35□□□□□ -1.71
ATG3Q9NT62 Y_RNA.623-201ENST00000411128 95 ntBASIC4.35□□□□□ -1.71
ATG3Q9NT62 MTATP6P4-201ENST00000427725 675 ntBASIC4.35□□□□□ -1.71
ATG3Q9NT62 AK3P2-201ENST00000507976 429 ntBASIC4.35□□□□□ -1.71
ATG3Q9NT62 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.35□□□□□ -1.71
ATG3Q9NT62 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC4.35□□□□□ -1.71
ATG3Q9NT62 Y_RNA.679-201ENST00000516416 91 ntBASIC4.35□□□□□ -1.71
ATG3Q9NT62 RNA5SP468-201ENST00000516782 93 ntBASIC4.35□□□□□ -1.71
ATG3Q9NT62 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC4.35□□□□□ -1.71
ATG3Q9NT62 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
ATG3Q9NT62 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
ATG3Q9NT62 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC4.35□□□□□ -1.71
ATG3Q9NT62 AC006386.2-201ENST00000624491 75 ntBASIC4.35□□□□□ -1.71
ATG3Q9NT62 AC012005.1-201ENST00000624575 75 ntBASIC4.35□□□□□ -1.71
ATG3Q9NT62 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC4.35□□□□□ -1.71
ATG3Q9NT62 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.35□□□□□ -1.71
ATG3Q9NT62 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC4.34□□□□□ -1.71
ATG3Q9NT62 AC073073.2-201ENST00000609827 2578 ntBASIC4.34□□□□□ -1.71
ATG3Q9NT62 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ATG3Q9NT62 RNU6-50P-201ENST00000362356 103 ntBASIC4.34□□□□□ -1.71
ATG3Q9NT62 Y_RNA.82-201ENST00000363000 102 ntBASIC4.34□□□□□ -1.71
ATG3Q9NT62 Y_RNA.92-201ENST00000363043 102 ntBASIC4.34□□□□□ -1.71
ATG3Q9NT62 Y_RNA.235-201ENST00000364412 102 ntBASIC4.34□□□□□ -1.71
ATG3Q9NT62 RNU6-283P-201ENST00000364788 107 ntBASIC4.34□□□□□ -1.71
ATG3Q9NT62 Y_RNA.306-201ENST00000365015 102 ntBASIC4.34□□□□□ -1.71
ATG3Q9NT62 Y_RNA.312-201ENST00000365089 102 ntBASIC4.34□□□□□ -1.71
ATG3Q9NT62 Y_RNA.322-201ENST00000365151 102 ntBASIC4.34□□□□□ -1.71
ATG3Q9NT62 Y_RNA.497-201ENST00000384447 98 ntBASIC4.34□□□□□ -1.71
ATG3Q9NT62 Y_RNA.569-201ENST00000384749 103 ntBASIC4.34□□□□□ -1.71
ATG3Q9NT62 Y_RNA.650-201ENST00000459002 102 ntBASIC4.34□□□□□ -1.71
ATG3Q9NT62 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC4.34□□□□□ -1.71
ATG3Q9NT62 RNU6-927P-201ENST00000516199 100 ntBASIC4.34□□□□□ -1.71
ATG3Q9NT62 Y_RNA.777-201ENST00000516982 102 ntBASIC4.34□□□□□ -1.71
ATG3Q9NT62 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC4.34□□□□□ -1.71
ATG3Q9NT62 ZNF192P1-203ENST00000565888 810 ntBASIC4.34□□□□□ -1.71
ATG3Q9NT62 MIR4513-201ENST00000581077 86 ntBASIC4.34□□□□□ -1.71
ATG3Q9NT62 AC060766.3-201ENST00000591442 263 ntBASIC4.34□□□□□ -1.71
ATG3Q9NT62 Y_RNA.771-201ENST00000598668 102 ntBASIC4.34□□□□□ -1.71
ATG3Q9NT62 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.34□□□□□ -1.71
ATG3Q9NT62 AL161629.2-201ENST00000615347 275 ntBASIC4.34□□□□□ -1.71
ATG3Q9NT62 Y_RNA.789-201ENST00000622480 102 ntBASIC4.34□□□□□ -1.71
ATG3Q9NT62 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
ATG3Q9NT62 RNF38-201ENST00000259605 5012 ntTSL 1 (best) BASIC4.34□□□□□ -1.72
ATG3Q9NT62 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ATG3Q9NT62 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.33□□□□□ -1.72
ATG3Q9NT62 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC4.33□□□□□ -1.72
ATG3Q9NT62 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ATG3Q9NT62 RNU6-395P-201ENST00000365662 106 ntBASIC4.33□□□□□ -1.72
ATG3Q9NT62 RNU6-1025P-201ENST00000410629 104 ntBASIC4.33□□□□□ -1.72
ATG3Q9NT62 MTCO1P5-201ENST00000433573 344 ntBASIC4.33□□□□□ -1.72
ATG3Q9NT62 AP001025.1-201ENST00000486139 332 ntBASIC4.33□□□□□ -1.72
ATG3Q9NT62 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC4.33□□□□□ -1.72
ATG3Q9NT62 AC010928.2-201ENST00000588017 287 ntBASIC4.33□□□□□ -1.72
ATG3Q9NT62 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC4.33□□□□□ -1.72
ATG3Q9NT62 SNORD113-5-201ENST00000607261 78 ntBASIC4.33□□□□□ -1.72
ATG3Q9NT62 AC005046.1-201ENST00000608515 625 ntBASIC4.33□□□□□ -1.72
ATG3Q9NT62 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ATG3Q9NT62 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
ATG3Q9NT62 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
ATG3Q9NT62 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC4.33□□□□□ -1.72
ATG3Q9NT62 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC4.33□□□□□ -1.72
ATG3Q9NT62 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
ATG3Q9NT62 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ATG3Q9NT62 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.32□□□□□ -1.72
ATG3Q9NT62 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
ATG3Q9NT62 AL672296.1-201ENST00000427780 2158 ntBASIC4.32□□□□□ -1.72
ATG3Q9NT62 SNORD14B-201ENST00000364533 90 ntBASIC4.32□□□□□ -1.72
ATG3Q9NT62 Y_RNA.308-201ENST00000365043 101 ntBASIC4.32□□□□□ -1.72
ATG3Q9NT62 SNORD116-18-201ENST00000383961 92 ntBASIC4.32□□□□□ -1.72
ATG3Q9NT62 Y_RNA.435-201ENST00000384095 112 ntBASIC4.32□□□□□ -1.72
ATG3Q9NT62 Y_RNA.446-201ENST00000384178 104 ntBASIC4.32□□□□□ -1.72
ATG3Q9NT62 RNU6-417P-201ENST00000384712 107 ntBASIC4.32□□□□□ -1.72
ATG3Q9NT62 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.32□□□□□ -1.72
ATG3Q9NT62 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC4.32□□□□□ -1.72
ATG3Q9NT62 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.32□□□□□ -1.72
ATG3Q9NT62 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC4.32□□□□□ -1.72
ATG3Q9NT62 RPL21P9-201ENST00000556149 474 ntBASIC4.32□□□□□ -1.72
ATG3Q9NT62 IGHVIII-44-202ENST00000636235 289 ntBASIC4.32□□□□□ -1.72
ATG3Q9NT62 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC4.32□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms