Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 RNU6-655P-201ENST00000362858 107 ntBASIC2.5□□□□□ -2.01
HINT3Q9NQE9 SNORD50.1-201ENST00000362987 71 ntBASIC2.5□□□□□ -2.01
HINT3Q9NQE9 RNU6-1210P-201ENST00000363775 107 ntBASIC2.5□□□□□ -2.01
HINT3Q9NQE9 RNU6-1188P-201ENST00000363795 107 ntBASIC2.5□□□□□ -2.01
HINT3Q9NQE9 SET-203ENST00000372688 801 ntTSL 2 BASIC2.5□□□□□ -2.01
HINT3Q9NQE9 Y_RNA.504-201ENST00000384481 104 ntBASIC2.5□□□□□ -2.01
HINT3Q9NQE9 Y_RNA.509-201ENST00000384506 99 ntBASIC2.5□□□□□ -2.01
HINT3Q9NQE9 EIF4EP2-201ENST00000422816 654 ntBASIC2.5□□□□□ -2.01
HINT3Q9NQE9 MTND3P23-201ENST00000431980 347 ntBASIC2.5□□□□□ -2.01
HINT3Q9NQE9 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC2.5□□□□□ -2.01
HINT3Q9NQE9 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC2.5□□□□□ -2.01
HINT3Q9NQE9 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.5□□□□□ -2.01
HINT3Q9NQE9 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.5□□□□□ -2.01
HINT3Q9NQE9 RPL39P40-201ENST00000445481 146 ntBASIC2.5□□□□□ -2.01
HINT3Q9NQE9 AL121594.1-201ENST00000475906 575 ntBASIC2.5□□□□□ -2.01
HINT3Q9NQE9 RPS27AP9-201ENST00000477681 438 ntBASIC2.5□□□□□ -2.01
HINT3Q9NQE9 FO393415.2-201ENST00000480085 343 ntBASIC2.5□□□□□ -2.01
HINT3Q9NQE9 RPL7P42-201ENST00000481005 679 ntBASIC2.5□□□□□ -2.01
HINT3Q9NQE9 AC104564.1-201ENST00000493028 407 ntBASIC2.5□□□□□ -2.01
HINT3Q9NQE9 AIG1P1-201ENST00000503376 148 ntBASIC2.5□□□□□ -2.01
HINT3Q9NQE9 AC016632.1-201ENST00000503994 196 ntBASIC2.5□□□□□ -2.01
HINT3Q9NQE9 AC023141.11-201ENST00000508864 202 ntBASIC2.5□□□□□ -2.01
HINT3Q9NQE9 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC2.5□□□□□ -2.01
HINT3Q9NQE9 RNU2-53P-201ENST00000516257 147 ntBASIC2.5□□□□□ -2.01
HINT3Q9NQE9 RNU6-56P-201ENST00000516986 93 ntBASIC2.5□□□□□ -2.01
HINT3Q9NQE9 RNU6-1213P-201ENST00000517075 94 ntBASIC2.5□□□□□ -2.01
HINT3Q9NQE9 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.5□□□□□ -2.01
HINT3Q9NQE9 AC007375.1-201ENST00000554513 578 ntBASIC2.5□□□□□ -2.01
HINT3Q9NQE9 AC007347.1-201ENST00000563879 281 ntTSL 3 BASIC2.5□□□□□ -2.01
HINT3Q9NQE9 AC026462.3-202ENST00000564361 515 ntTSL 3 BASIC2.5□□□□□ -2.01
HINT3Q9NQE9 LARP7P3-201ENST00000579888 337 ntBASIC2.5□□□□□ -2.01
HINT3Q9NQE9 AC022035.1-201ENST00000579923 302 ntTSL 2 BASIC2.5□□□□□ -2.01
HINT3Q9NQE9 MIR4273-201ENST00000582824 84 ntBASIC2.5□□□□□ -2.01
HINT3Q9NQE9 MIR5690-201ENST00000583739 73 ntBASIC2.5□□□□□ -2.01
HINT3Q9NQE9 MTND4LP32-201ENST00000636111 270 ntBASIC2.5□□□□□ -2.01
HINT3Q9NQE9 AL669831.3-213ENST00000636676 183 ntBASIC2.5□□□□□ -2.01
HINT3Q9NQE9 AP000560.1-201ENST00000624150 1937 ntBASIC2.5□□□□□ -2.01
HINT3Q9NQE9 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC2.5□□□□□ -2.01
HINT3Q9NQE9 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.49□□□□□ -2.01
HINT3Q9NQE9 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC2.49□□□□□ -2.01
HINT3Q9NQE9 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HINT3Q9NQE9 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.49□□□□□ -2.01
HINT3Q9NQE9 AC092268.1-201ENST00000342691 405 ntBASIC2.49□□□□□ -2.01
HINT3Q9NQE9 Y_RNA.404-201ENST00000383978 102 ntBASIC2.49□□□□□ -2.01
HINT3Q9NQE9 MIR627-201ENST00000384979 97 ntBASIC2.49□□□□□ -2.01
HINT3Q9NQE9 U6atac.2-201ENST00000408644 118 ntBASIC2.49□□□□□ -2.01
HINT3Q9NQE9 EIF1AXP1-201ENST00000419267 435 ntBASIC2.49□□□□□ -2.01
HINT3Q9NQE9 AC008549.1-201ENST00000512900 643 ntBASIC2.49□□□□□ -2.01
HINT3Q9NQE9 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.49□□□□□ -2.01
HINT3Q9NQE9 RNU5F-2P-201ENST00000516066 82 ntBASIC2.49□□□□□ -2.01
HINT3Q9NQE9 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC2.49□□□□□ -2.01
HINT3Q9NQE9 AC027176.1-201ENST00000560204 514 ntBASIC2.49□□□□□ -2.01
HINT3Q9NQE9 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC2.49□□□□□ -2.01
HINT3Q9NQE9 AC009318.2-201ENST00000610917 651 ntBASIC2.49□□□□□ -2.01
HINT3Q9NQE9 AL359198.2-201ENST00000611836 194 ntBASIC2.49□□□□□ -2.01
HINT3Q9NQE9 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.49□□□□□ -2.01
HINT3Q9NQE9 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HINT3Q9NQE9 AC006386.2-201ENST00000624491 75 ntBASIC2.49□□□□□ -2.01
HINT3Q9NQE9 AC012005.1-201ENST00000624575 75 ntBASIC2.49□□□□□ -2.01
HINT3Q9NQE9 AL450472.1-202ENST00000637286 180 ntBASIC2.49□□□□□ -2.01
HINT3Q9NQE9 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
HINT3Q9NQE9 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.49□□□□□ -2.01
HINT3Q9NQE9 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
HINT3Q9NQE9 MTND4P27-201ENST00000450813 1354 ntBASIC2.49□□□□□ -2.01
HINT3Q9NQE9 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
HINT3Q9NQE9 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.48□□□□□ -2.01
HINT3Q9NQE9 Y_RNA.2-201ENST00000362330 96 ntBASIC2.48□□□□□ -2.01
HINT3Q9NQE9 Y_RNA.259-201ENST00000364619 101 ntBASIC2.48□□□□□ -2.01
HINT3Q9NQE9 RNU6-142P-201ENST00000384019 107 ntBASIC2.48□□□□□ -2.01
HINT3Q9NQE9 SNORD116-29-201ENST00000384516 83 ntBASIC2.48□□□□□ -2.01
HINT3Q9NQE9 SNORA26.3-201ENST00000391119 136 ntBASIC2.48□□□□□ -2.01
HINT3Q9NQE9 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.48□□□□□ -2.01
HINT3Q9NQE9 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.48□□□□□ -2.01
HINT3Q9NQE9 AL590135.1-201ENST00000422215 156 ntBASIC2.48□□□□□ -2.01
HINT3Q9NQE9 AC019205.3-201ENST00000424573 156 ntBASIC2.48□□□□□ -2.01
HINT3Q9NQE9 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.48□□□□□ -2.01
HINT3Q9NQE9 GPM6BP3-201ENST00000442797 145 ntBASIC2.48□□□□□ -2.01
HINT3Q9NQE9 AC016700.2-201ENST00000446011 156 ntBASIC2.48□□□□□ -2.01
HINT3Q9NQE9 AC079354.2-201ENST00000453523 154 ntBASIC2.48□□□□□ -2.01
HINT3Q9NQE9 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.48□□□□□ -2.01
HINT3Q9NQE9 SNORD19B-201ENST00000459623 84 ntBASIC2.48□□□□□ -2.01
HINT3Q9NQE9 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.48□□□□□ -2.01
HINT3Q9NQE9 AC073901.1-201ENST00000462471 408 ntBASIC2.48□□□□□ -2.01
HINT3Q9NQE9 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.48□□□□□ -2.01
HINT3Q9NQE9 AC140059.1-201ENST00000489238 361 ntBASIC2.48□□□□□ -2.01
HINT3Q9NQE9 AC015911.1-201ENST00000495111 156 ntBASIC2.48□□□□□ -2.01
HINT3Q9NQE9 AC005741.1-201ENST00000511094 432 ntBASIC2.48□□□□□ -2.01
HINT3Q9NQE9 RNU4ATAC7P-201ENST00000516280 125 ntBASIC2.48□□□□□ -2.01
HINT3Q9NQE9 Y_RNA.718-201ENST00000517110 102 ntBASIC2.48□□□□□ -2.01
HINT3Q9NQE9 MRPS36P4-201ENST00000534436 298 ntBASIC2.48□□□□□ -2.01
HINT3Q9NQE9 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC2.48□□□□□ -2.01
HINT3Q9NQE9 AC105245.1-201ENST00000581934 244 ntBASIC2.48□□□□□ -2.01
HINT3Q9NQE9 AC090616.3-201ENST00000582184 217 ntBASIC2.48□□□□□ -2.01
HINT3Q9NQE9 RPL30P11-203ENST00000598995 310 ntBASIC2.48□□□□□ -2.01
HINT3Q9NQE9 AC069294.1-201ENST00000608397 350 ntBASIC2.48□□□□□ -2.01
HINT3Q9NQE9 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.48□□□□□ -2.01
HINT3Q9NQE9 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
HINT3Q9NQE9 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.48□□□□□ -2.01
HINT3Q9NQE9 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
HINT3Q9NQE9 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.47□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 133.7 ms