Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC097372.5-201ENST00000623665 376 ntBASIC2.39□□□□□ -2.03
SIX2Q9NPC8 AC006026.1-201ENST00000444025 1803 ntBASIC2.39□□□□□ -2.03
SIX2Q9NPC8 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.39□□□□□ -2.03
SIX2Q9NPC8 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SIX2Q9NPC8 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC2.38□□□□□ -2.03
SIX2Q9NPC8 HAUS6P2-201ENST00000433254 2404 ntBASIC2.38□□□□□ -2.03
SIX2Q9NPC8 RNU6-527P-201ENST00000363425 104 ntBASIC2.38□□□□□ -2.03
SIX2Q9NPC8 RNU6-1188P-201ENST00000363795 107 ntBASIC2.38□□□□□ -2.03
SIX2Q9NPC8 RNU6-933P-201ENST00000384424 107 ntBASIC2.38□□□□□ -2.03
SIX2Q9NPC8 RNU6-843P-201ENST00000384454 104 ntBASIC2.38□□□□□ -2.03
SIX2Q9NPC8 SNORA80E-201ENST00000384744 137 ntBASIC2.38□□□□□ -2.03
SIX2Q9NPC8 AL513475.1-201ENST00000406602 315 ntBASIC2.38□□□□□ -2.03
SIX2Q9NPC8 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC2.38□□□□□ -2.03
SIX2Q9NPC8 MTND4P28-201ENST00000426217 387 ntBASIC2.38□□□□□ -2.03
SIX2Q9NPC8 AC009414.1-201ENST00000427200 443 ntBASIC2.38□□□□□ -2.03
SIX2Q9NPC8 USP9YP30-201ENST00000430729 455 ntBASIC2.38□□□□□ -2.03
SIX2Q9NPC8 AL133396.1-201ENST00000432048 687 ntBASIC2.38□□□□□ -2.03
SIX2Q9NPC8 AL591043.1-201ENST00000432461 424 ntBASIC2.38□□□□□ -2.03
SIX2Q9NPC8 AC236972.2-201ENST00000434979 310 ntBASIC2.38□□□□□ -2.03
SIX2Q9NPC8 DAP3P1-201ENST00000441522 278 ntBASIC2.38□□□□□ -2.03
SIX2Q9NPC8 UBE2V1P7-201ENST00000446395 340 ntBASIC2.38□□□□□ -2.03
SIX2Q9NPC8 KPNA2P1-201ENST00000458289 1591 ntBASIC2.38□□□□□ -2.03
SIX2Q9NPC8 U8.21-201ENST00000459536 136 ntBASIC2.38□□□□□ -2.03
SIX2Q9NPC8 SNORA31.18-201ENST00000517043 134 ntBASIC2.38□□□□□ -2.03
SIX2Q9NPC8 Y_RNA.718-201ENST00000517110 102 ntBASIC2.38□□□□□ -2.03
SIX2Q9NPC8 SNORA31.23-201ENST00000517219 133 ntBASIC2.38□□□□□ -2.03
SIX2Q9NPC8 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC2.38□□□□□ -2.03
SIX2Q9NPC8 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.38□□□□□ -2.03
SIX2Q9NPC8 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.38□□□□□ -2.03
SIX2Q9NPC8 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC2.38□□□□□ -2.03
SIX2Q9NPC8 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.38□□□□□ -2.03
SIX2Q9NPC8 AP000654.2-201ENST00000605633 586 ntBASIC2.38□□□□□ -2.03
SIX2Q9NPC8 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC2.38□□□□□ -2.03
SIX2Q9NPC8 AC022140.2-201ENST00000623500 188 ntBASIC2.38□□□□□ -2.03
SIX2Q9NPC8 MTND4LP32-201ENST00000636111 270 ntBASIC2.38□□□□□ -2.03
SIX2Q9NPC8 MIR3529-201ENST00000637713 78 ntBASIC2.38□□□□□ -2.03
SIX2Q9NPC8 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.37□□□□□ -2.03
SIX2Q9NPC8 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.37□□□□□ -2.03
SIX2Q9NPC8 SNORD56.1-201ENST00000362913 68 ntBASIC2.37□□□□□ -2.03
SIX2Q9NPC8 RNU6-694P-201ENST00000364071 147 ntBASIC2.37□□□□□ -2.03
SIX2Q9NPC8 RNA5SP139-201ENST00000364340 117 ntBASIC2.37□□□□□ -2.03
SIX2Q9NPC8 Y_RNA.259-201ENST00000364619 101 ntBASIC2.37□□□□□ -2.03
SIX2Q9NPC8 Y_RNA.813-201ENST00000364639 102 ntBASIC2.37□□□□□ -2.03
SIX2Q9NPC8 RNU6-487P-201ENST00000365430 104 ntBASIC2.37□□□□□ -2.03
SIX2Q9NPC8 Y_RNA.473-201ENST00000384333 102 ntBASIC2.37□□□□□ -2.03
SIX2Q9NPC8 RNU6-790P-201ENST00000384479 105 ntBASIC2.37□□□□□ -2.03
SIX2Q9NPC8 RNY4P36-201ENST00000391116 96 ntBASIC2.37□□□□□ -2.03
SIX2Q9NPC8 RNA5SP354-201ENST00000391247 136 ntBASIC2.37□□□□□ -2.03
SIX2Q9NPC8 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SIX2Q9NPC8 MTCYBP4-201ENST00000401524 249 ntBASIC2.37□□□□□ -2.03
SIX2Q9NPC8 Y_RNA.594-201ENST00000410373 140 ntBASIC2.37□□□□□ -2.03
SIX2Q9NPC8 RNU6-1304P-201ENST00000411374 106 ntBASIC2.37□□□□□ -2.03
SIX2Q9NPC8 HMGN2P35-201ENST00000412164 270 ntBASIC2.37□□□□□ -2.03
SIX2Q9NPC8 RPS20P15-201ENST00000412792 311 ntBASIC2.37□□□□□ -2.03
SIX2Q9NPC8 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.37□□□□□ -2.03
SIX2Q9NPC8 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SIX2Q9NPC8 AC243964.1-201ENST00000441814 261 ntBASIC2.37□□□□□ -2.03
SIX2Q9NPC8 AC007969.2-201ENST00000441891 191 ntBASIC2.37□□□□□ -2.03
SIX2Q9NPC8 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC2.37□□□□□ -2.03
SIX2Q9NPC8 FTH1P25-201ENST00000447665 469 ntBASIC2.37□□□□□ -2.03
SIX2Q9NPC8 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.37□□□□□ -2.03
SIX2Q9NPC8 AP001025.1-201ENST00000486139 332 ntBASIC2.37□□□□□ -2.03
SIX2Q9NPC8 RAC1P5-201ENST00000512182 576 ntBASIC2.37□□□□□ -2.03
SIX2Q9NPC8 RNU5F-8P-201ENST00000515941 111 ntBASIC2.37□□□□□ -2.03
SIX2Q9NPC8 Y_RNA.670-201ENST00000516255 105 ntBASIC2.37□□□□□ -2.03
SIX2Q9NPC8 RNU6-612P-201ENST00000516909 102 ntBASIC2.37□□□□□ -2.03
SIX2Q9NPC8 Y_RNA.708-201ENST00000516950 96 ntBASIC2.37□□□□□ -2.03
SIX2Q9NPC8 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC2.37□□□□□ -2.03
SIX2Q9NPC8 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC2.37□□□□□ -2.03
SIX2Q9NPC8 PRELID2P1-201ENST00000552837 301 ntBASIC2.37□□□□□ -2.03
SIX2Q9NPC8 AC011494.1-201ENST00000596454 237 ntBASIC2.37□□□□□ -2.03
SIX2Q9NPC8 AL355877.2-201ENST00000603670 358 ntBASIC2.37□□□□□ -2.03
SIX2Q9NPC8 MIR3976-201ENST00000606807 139 ntBASIC2.37□□□□□ -2.03
SIX2Q9NPC8 RNU6ATAC35P-201ENST00000609276 444 ntBASIC2.37□□□□□ -2.03
SIX2Q9NPC8 DLEU2_5.1-201ENST00000615567 84 ntBASIC2.37□□□□□ -2.03
SIX2Q9NPC8 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SIX2Q9NPC8 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.37□□□□□ -2.03
SIX2Q9NPC8 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SIX2Q9NPC8 AL365361.1-201ENST00000566942 3481 ntBASIC2.37□□□□□ -2.03
SIX2Q9NPC8 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.36□□□□□ -2.03
SIX2Q9NPC8 RBBP8P1-201ENST00000449447 1844 ntBASIC2.36□□□□□ -2.03
SIX2Q9NPC8 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SIX2Q9NPC8 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
SIX2Q9NPC8 RNU6-1059P-201ENST00000363752 98 ntBASIC2.36□□□□□ -2.03
SIX2Q9NPC8 Y_RNA.460-201ENST00000384255 102 ntBASIC2.36□□□□□ -2.03
SIX2Q9NPC8 RNU6-622P-201ENST00000384272 103 ntBASIC2.36□□□□□ -2.03
SIX2Q9NPC8 RNU6-1050P-201ENST00000410388 107 ntBASIC2.36□□□□□ -2.03
SIX2Q9NPC8 MTCO2P27-201ENST00000420740 428 ntBASIC2.36□□□□□ -2.03
SIX2Q9NPC8 AF228730.4-201ENST00000421457 183 ntBASIC2.36□□□□□ -2.03
SIX2Q9NPC8 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC2.36□□□□□ -2.03
SIX2Q9NPC8 AC004383.1-201ENST00000438135 289 ntBASIC2.36□□□□□ -2.03
SIX2Q9NPC8 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.36□□□□□ -2.03
SIX2Q9NPC8 AC124916.1-201ENST00000444020 547 ntBASIC2.36□□□□□ -2.03
SIX2Q9NPC8 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2.36□□□□□ -2.03
SIX2Q9NPC8 RPS29P27-201ENST00000463711 170 ntBASIC2.36□□□□□ -2.03
SIX2Q9NPC8 AC107626.1-201ENST00000471084 183 ntBASIC2.36□□□□□ -2.03
SIX2Q9NPC8 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC2.36□□□□□ -2.03
SIX2Q9NPC8 AP005902.1-201ENST00000521358 186 ntBASIC2.36□□□□□ -2.03
SIX2Q9NPC8 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC2.36□□□□□ -2.03
SIX2Q9NPC8 POC1B-211ENST00000549504 581 ntTSL 5 BASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms