Protein–RNA interactions for Protein: Q9HD42

CHMP1A, Charged multivesicular body protein 1a, humanhuman

Predicted RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1AQ9HD42 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.3□□□□□ -2.04
CHMP1AQ9HD42 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
CHMP1AQ9HD42 Y_RNA.184-201ENST00000363884 108 ntBASIC2.3□□□□□ -2.04
CHMP1AQ9HD42 Y_RNA.303-201ENST00000364998 94 ntBASIC2.3□□□□□ -2.04
CHMP1AQ9HD42 MIR548K-201ENST00000408406 116 ntBASIC2.3□□□□□ -2.04
CHMP1AQ9HD42 RN7SKP32-201ENST00000410167 303 ntBASIC2.3□□□□□ -2.04
CHMP1AQ9HD42 Y_RNA.597-201ENST00000410463 100 ntBASIC2.3□□□□□ -2.04
CHMP1AQ9HD42 Z82205.1-201ENST00000428456 297 ntBASIC2.3□□□□□ -2.04
CHMP1AQ9HD42 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.3□□□□□ -2.04
CHMP1AQ9HD42 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC2.3□□□□□ -2.04
CHMP1AQ9HD42 FTH1P25-201ENST00000447665 469 ntBASIC2.3□□□□□ -2.04
CHMP1AQ9HD42 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.3□□□□□ -2.04
CHMP1AQ9HD42 AC145146.1-201ENST00000496370 254 ntBASIC2.3□□□□□ -2.04
CHMP1AQ9HD42 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC2.3□□□□□ -2.04
CHMP1AQ9HD42 RNA5SP402-201ENST00000517148 110 ntBASIC2.3□□□□□ -2.04
CHMP1AQ9HD42 PRELID2P1-201ENST00000552837 301 ntBASIC2.3□□□□□ -2.04
CHMP1AQ9HD42 AC021231.3-201ENST00000558497 370 ntBASIC2.3□□□□□ -2.04
CHMP1AQ9HD42 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC2.3□□□□□ -2.04
CHMP1AQ9HD42 Z98751.3-201ENST00000604447 521 ntBASIC2.3□□□□□ -2.04
CHMP1AQ9HD42 AC124303.1-201ENST00000605703 360 ntBASIC2.3□□□□□ -2.04
CHMP1AQ9HD42 UBE2E2-206ENST00000613545 282 ntTSL 5 BASIC2.3□□□□□ -2.04
CHMP1AQ9HD42 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC2.3□□□□□ -2.04
CHMP1AQ9HD42 DNAH14-210ENST00000439375 13548 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
CHMP1AQ9HD42 AC069528.2-201ENST00000624849 1991 ntBASIC2.3□□□□□ -2.04
CHMP1AQ9HD42 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.29□□□□□ -2.04
CHMP1AQ9HD42 DEUP1-201ENST00000298050 2664 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
CHMP1AQ9HD42 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CHMP1AQ9HD42 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.29□□□□□ -2.04
CHMP1AQ9HD42 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
CHMP1AQ9HD42 SNORA71.3-201ENST00000362582 128 ntBASIC2.29□□□□□ -2.04
CHMP1AQ9HD42 SNORD50.1-201ENST00000362987 71 ntBASIC2.29□□□□□ -2.04
CHMP1AQ9HD42 Y_RNA.166-201ENST00000363730 102 ntBASIC2.29□□□□□ -2.04
CHMP1AQ9HD42 SNORA38-201ENST00000363946 132 ntBASIC2.29□□□□□ -2.04
CHMP1AQ9HD42 Y_RNA.339-201ENST00000365325 102 ntBASIC2.29□□□□□ -2.04
CHMP1AQ9HD42 RNU6-784P-201ENST00000384330 106 ntBASIC2.29□□□□□ -2.04
CHMP1AQ9HD42 RNU1-148P-201ENST00000384472 162 ntBASIC2.29□□□□□ -2.04
CHMP1AQ9HD42 MTCYBP2-201ENST00000407745 171 ntBASIC2.29□□□□□ -2.04
CHMP1AQ9HD42 RNA5SP201-201ENST00000410316 124 ntBASIC2.29□□□□□ -2.04
CHMP1AQ9HD42 RNU2-48P-201ENST00000410694 191 ntBASIC2.29□□□□□ -2.04
CHMP1AQ9HD42 HMGN1P12-201ENST00000499125 195 ntBASIC2.29□□□□□ -2.04
CHMP1AQ9HD42 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.29□□□□□ -2.04
CHMP1AQ9HD42 AC021146.2-201ENST00000504736 556 ntBASIC2.29□□□□□ -2.04
CHMP1AQ9HD42 AC005741.1-201ENST00000511094 432 ntBASIC2.29□□□□□ -2.04
CHMP1AQ9HD42 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.29□□□□□ -2.04
CHMP1AQ9HD42 RNA5SP341-201ENST00000516261 117 ntBASIC2.29□□□□□ -2.04
CHMP1AQ9HD42 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC2.29□□□□□ -2.04
CHMP1AQ9HD42 MIR4429-201ENST00000580105 73 ntBASIC2.29□□□□□ -2.04
CHMP1AQ9HD42 MIR6075-201ENST00000620782 95 ntBASIC2.29□□□□□ -2.04
CHMP1AQ9HD42 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CHMP1AQ9HD42 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CHMP1AQ9HD42 RNU5B-2P-201ENST00000363036 113 ntBASIC2.28□□□□□ -2.04
CHMP1AQ9HD42 SNORD81.2-201ENST00000365153 76 ntBASIC2.28□□□□□ -2.04
CHMP1AQ9HD42 SNORA25B-201ENST00000365507 128 ntBASIC2.28□□□□□ -2.04
CHMP1AQ9HD42 SNORA29-201ENST00000384183 140 ntBASIC2.28□□□□□ -2.04
CHMP1AQ9HD42 SNORA80E-201ENST00000384744 137 ntBASIC2.28□□□□□ -2.04
CHMP1AQ9HD42 MIR561-201ENST00000385216 97 ntBASIC2.28□□□□□ -2.04
CHMP1AQ9HD42 SNORA46.1-201ENST00000391069 153 ntBASIC2.28□□□□□ -2.04
CHMP1AQ9HD42 SNORA12-201ENST00000391162 147 ntBASIC2.28□□□□□ -2.04
CHMP1AQ9HD42 MIR548F5-201ENST00000408421 86 ntBASIC2.28□□□□□ -2.04
CHMP1AQ9HD42 EEF1A1P41-201ENST00000414667 207 ntBASIC2.28□□□□□ -2.04
CHMP1AQ9HD42 EIF1AXP1-201ENST00000419267 435 ntBASIC2.28□□□□□ -2.04
CHMP1AQ9HD42 AC092017.2-201ENST00000427600 362 ntBASIC2.28□□□□□ -2.04
CHMP1AQ9HD42 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC2.28□□□□□ -2.04
CHMP1AQ9HD42 DAP3P1-201ENST00000441522 278 ntBASIC2.28□□□□□ -2.04
CHMP1AQ9HD42 AL353572.1-201ENST00000442490 417 ntBASIC2.28□□□□□ -2.04
CHMP1AQ9HD42 SRIP1-201ENST00000489235 288 ntBASIC2.28□□□□□ -2.04
CHMP1AQ9HD42 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC2.28□□□□□ -2.04
CHMP1AQ9HD42 RPS27P27-201ENST00000498779 255 ntBASIC2.28□□□□□ -2.04
CHMP1AQ9HD42 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.28□□□□□ -2.04
CHMP1AQ9HD42 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC2.28□□□□□ -2.04
CHMP1AQ9HD42 AC011092.2-201ENST00000533659 586 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CHMP1AQ9HD42 AC018630.3-201ENST00000542637 96 ntBASIC2.28□□□□□ -2.04
CHMP1AQ9HD42 AC022080.3-201ENST00000544433 482 ntBASIC2.28□□□□□ -2.04
CHMP1AQ9HD42 AC016256.1-201ENST00000547971 354 ntBASIC2.28□□□□□ -2.04
CHMP1AQ9HD42 AC121758.2-201ENST00000553271 193 ntBASIC2.28□□□□□ -2.04
CHMP1AQ9HD42 FGF7P1-201ENST00000582820 288 ntBASIC2.28□□□□□ -2.04
CHMP1AQ9HD42 MIR4635-201ENST00000583759 79 ntBASIC2.28□□□□□ -2.04
CHMP1AQ9HD42 POLR3GP2-201ENST00000588366 668 ntBASIC2.28□□□□□ -2.04
CHMP1AQ9HD42 MIR6128-201ENST00000615528 109 ntBASIC2.28□□□□□ -2.04
CHMP1AQ9HD42 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC2.28□□□□□ -2.04
CHMP1AQ9HD42 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.28□□□□□ -2.05
CHMP1AQ9HD42 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.27□□□□□ -2.05
CHMP1AQ9HD42 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.27□□□□□ -2.05
CHMP1AQ9HD42 RNU6-1059P-201ENST00000363752 98 ntBASIC2.27□□□□□ -2.05
CHMP1AQ9HD42 SNORD32B-201ENST00000364460 84 ntBASIC2.27□□□□□ -2.05
CHMP1AQ9HD42 RNU6-1286P-201ENST00000383871 107 ntBASIC2.27□□□□□ -2.05
CHMP1AQ9HD42 TRAJ34-201ENST00000390503 58 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CHMP1AQ9HD42 RNA5SP210-201ENST00000391034 120 ntBASIC2.27□□□□□ -2.05
CHMP1AQ9HD42 RNU2-32P-201ENST00000411193 191 ntBASIC2.27□□□□□ -2.05
CHMP1AQ9HD42 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.27□□□□□ -2.05
CHMP1AQ9HD42 AL139396.1-201ENST00000421137 167 ntBASIC2.27□□□□□ -2.05
CHMP1AQ9HD42 AC012306.1-201ENST00000423267 114 ntBASIC2.27□□□□□ -2.05
CHMP1AQ9HD42 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.27□□□□□ -2.05
CHMP1AQ9HD42 RAB6C-AS1-202ENST00000433431 123 ntBASIC2.27□□□□□ -2.05
CHMP1AQ9HD42 HMGB1P18-201ENST00000438801 619 ntBASIC2.27□□□□□ -2.05
CHMP1AQ9HD42 AC098614.3-201ENST00000438957 440 ntBASIC2.27□□□□□ -2.05
CHMP1AQ9HD42 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
CHMP1AQ9HD42 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC2.27□□□□□ -2.05
CHMP1AQ9HD42 AC079354.2-201ENST00000453523 154 ntBASIC2.27□□□□□ -2.05
CHMP1AQ9HD42 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms