Protein–RNA interactions for Protein: Q9H9Y6

POLR1B, DNA-directed RNA polymerase I subunit RPA2, humanhuman

Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1BQ9H9Y6 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC2.56□□□□□ -2
POLR1BQ9H9Y6 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC2.56□□□□□ -2
POLR1BQ9H9Y6 AC023906.2-201ENST00000558343 462 ntTSL 3 BASIC2.56□□□□□ -2
POLR1BQ9H9Y6 CPDP1-201ENST00000579660 283 ntBASIC2.56□□□□□ -2
POLR1BQ9H9Y6 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.56□□□□□ -2
POLR1BQ9H9Y6 MIR3136-201ENST00000583498 78 ntBASIC2.56□□□□□ -2
POLR1BQ9H9Y6 AC011712.1-201ENST00000588959 234 ntBASIC2.56□□□□□ -2
POLR1BQ9H9Y6 AC060766.3-201ENST00000591442 263 ntBASIC2.56□□□□□ -2
POLR1BQ9H9Y6 AC009248.2-201ENST00000619826 254 ntBASIC2.56□□□□□ -2
POLR1BQ9H9Y6 AC080100.1-201ENST00000624239 5356 ntBASIC2.56□□□□□ -2
POLR1BQ9H9Y6 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
POLR1BQ9H9Y6 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
POLR1BQ9H9Y6 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.56□□□□□ -2
POLR1BQ9H9Y6 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC2.56□□□□□ -2
POLR1BQ9H9Y6 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.56□□□□□ -2
POLR1BQ9H9Y6 NAALADL2-203ENST00000454872 9865 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
POLR1BQ9H9Y6 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
POLR1BQ9H9Y6 AC092268.1-201ENST00000342691 405 ntBASIC2.55□□□□□ -2
POLR1BQ9H9Y6 Y_RNA.40-201ENST00000362645 93 ntBASIC2.55□□□□□ -2
POLR1BQ9H9Y6 RNU6-1252P-201ENST00000363054 104 ntBASIC2.55□□□□□ -2
POLR1BQ9H9Y6 SNORD116-11-201ENST00000383882 92 ntBASIC2.55□□□□□ -2
POLR1BQ9H9Y6 RNU6-1072P-201ENST00000384703 107 ntBASIC2.55□□□□□ -2
POLR1BQ9H9Y6 RNU6-443P-201ENST00000384780 107 ntBASIC2.55□□□□□ -2
POLR1BQ9H9Y6 BTF3L4P2-201ENST00000392798 346 ntBASIC2.55□□□□□ -2
POLR1BQ9H9Y6 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.55□□□□□ -2
POLR1BQ9H9Y6 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.55□□□□□ -2
POLR1BQ9H9Y6 IFNA20P-201ENST00000436840 528 ntBASIC2.55□□□□□ -2
POLR1BQ9H9Y6 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.55□□□□□ -2
POLR1BQ9H9Y6 AMD1P1-201ENST00000457220 922 ntBASIC2.55□□□□□ -2
POLR1BQ9H9Y6 RPS27P27-201ENST00000498779 255 ntBASIC2.55□□□□□ -2
POLR1BQ9H9Y6 AF213884.2-201ENST00000510417 903 ntBASIC2.55□□□□□ -2
POLR1BQ9H9Y6 AC025465.4-201ENST00000513422 638 ntBASIC2.55□□□□□ -2
POLR1BQ9H9Y6 SNORA31.15-201ENST00000516771 132 ntBASIC2.55□□□□□ -2
POLR1BQ9H9Y6 ZNF658B-202ENST00000615961 3375 ntBASIC2.55□□□□□ -2
POLR1BQ9H9Y6 AC009233.1-201ENST00000616477 371 ntBASIC2.55□□□□□ -2
POLR1BQ9H9Y6 CASC19-280ENST00000642102 1351 ntBASIC2.55□□□□□ -2
POLR1BQ9H9Y6 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
POLR1BQ9H9Y6 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.55□□□□□ -2
POLR1BQ9H9Y6 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.55□□□□□ -2
POLR1BQ9H9Y6 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
POLR1BQ9H9Y6 SNORA32.2-201ENST00000384049 122 ntBASIC2.54□□□□□ -2
POLR1BQ9H9Y6 RNU6-933P-201ENST00000384424 107 ntBASIC2.54□□□□□ -2
POLR1BQ9H9Y6 AL356057.3-201ENST00000402607 340 ntBASIC2.54□□□□□ -2
POLR1BQ9H9Y6 SNORA3.2-201ENST00000408221 125 ntBASIC2.54□□□□□ -2
POLR1BQ9H9Y6 RN7SKP192-201ENST00000411291 327 ntBASIC2.54□□□□□ -2
POLR1BQ9H9Y6 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC2.54□□□□□ -2
POLR1BQ9H9Y6 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.54□□□□□ -2
POLR1BQ9H9Y6 AC244670.1-201ENST00000436879 112 ntBASIC2.54□□□□□ -2
POLR1BQ9H9Y6 AC005154.1-208ENST00000440438 353 ntTSL 5 BASIC2.54□□□□□ -2
POLR1BQ9H9Y6 AL161788.1-201ENST00000441805 169 ntBASIC2.54□□□□□ -2
POLR1BQ9H9Y6 AL031659.1-201ENST00000447075 539 ntBASIC2.54□□□□□ -2
POLR1BQ9H9Y6 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC2.54□□□□□ -2
POLR1BQ9H9Y6 RNU7-26P-201ENST00000458980 63 ntBASIC2.54□□□□□ -2
POLR1BQ9H9Y6 RNU6-329P-201ENST00000459618 107 ntBASIC2.54□□□□□ -2
POLR1BQ9H9Y6 AC016632.1-201ENST00000503994 196 ntBASIC2.54□□□□□ -2
POLR1BQ9H9Y6 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC2.54□□□□□ -2
POLR1BQ9H9Y6 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.54□□□□□ -2
POLR1BQ9H9Y6 RNU4-49P-201ENST00000516080 140 ntBASIC2.54□□□□□ -2
POLR1BQ9H9Y6 AC107953.1-201ENST00000522216 297 ntBASIC2.54□□□□□ -2
POLR1BQ9H9Y6 AC023442.3-201ENST00000532199 495 ntTSL 2 BASIC2.54□□□□□ -2
POLR1BQ9H9Y6 AC016256.1-201ENST00000547971 354 ntBASIC2.54□□□□□ -2
POLR1BQ9H9Y6 IMMP1LP2-201ENST00000552954 492 ntBASIC2.54□□□□□ -2
POLR1BQ9H9Y6 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.54□□□□□ -2
POLR1BQ9H9Y6 AP001094.1-201ENST00000579805 193 ntBASIC2.54□□□□□ -2
POLR1BQ9H9Y6 MIR4524B-201ENST00000581569 115 ntBASIC2.54□□□□□ -2
POLR1BQ9H9Y6 MIR4658-201ENST00000584344 65 ntBASIC2.54□□□□□ -2
POLR1BQ9H9Y6 MIR3942-201ENST00000585264 109 ntBASIC2.54□□□□□ -2
POLR1BQ9H9Y6 AL713866.2-201ENST00000603579 219 ntBASIC2.54□□□□□ -2
POLR1BQ9H9Y6 AL670379.2-201ENST00000604983 252 ntBASIC2.54□□□□□ -2
POLR1BQ9H9Y6 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.54□□□□□ -2
POLR1BQ9H9Y6 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.54□□□□□ -2
POLR1BQ9H9Y6 U4atac.1-201ENST00000618345 95 ntBASIC2.54□□□□□ -2
POLR1BQ9H9Y6 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.54□□□□□ -2
POLR1BQ9H9Y6 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.54□□□□□ -2
POLR1BQ9H9Y6 ZNF271P-202ENST00000465539 1970 ntBASIC2.54□□□□□ -2
POLR1BQ9H9Y6 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.53□□□□□ -2
POLR1BQ9H9Y6 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
POLR1BQ9H9Y6 RNA5SP393-201ENST00000363423 117 ntBASIC2.53□□□□□ -2
POLR1BQ9H9Y6 RNU6-95P-201ENST00000384697 107 ntBASIC2.53□□□□□ -2
POLR1BQ9H9Y6 MIR29B2-201ENST00000385055 81 ntBASIC2.53□□□□□ -2
POLR1BQ9H9Y6 MT-TL1-201ENST00000386347 75 ntBASIC2.53□□□□□ -2
POLR1BQ9H9Y6 SNORA26.3-201ENST00000391119 136 ntBASIC2.53□□□□□ -2
POLR1BQ9H9Y6 RNU6-325P-201ENST00000411132 105 ntBASIC2.53□□□□□ -2
POLR1BQ9H9Y6 HMGN2P35-201ENST00000412164 270 ntBASIC2.53□□□□□ -2
POLR1BQ9H9Y6 EIF1AXP1-201ENST00000419267 435 ntBASIC2.53□□□□□ -2
POLR1BQ9H9Y6 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.53□□□□□ -2
POLR1BQ9H9Y6 USP9YP28-201ENST00000435142 589 ntBASIC2.53□□□□□ -2
POLR1BQ9H9Y6 snoU13.15-201ENST00000459407 104 ntBASIC2.53□□□□□ -2
POLR1BQ9H9Y6 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.53□□□□□ -2
POLR1BQ9H9Y6 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC2.53□□□□□ -2
POLR1BQ9H9Y6 CKS1BP2-201ENST00000497342 240 ntBASIC2.53□□□□□ -2
POLR1BQ9H9Y6 MTCO2P30-201ENST00000503662 364 ntBASIC2.53□□□□□ -2
POLR1BQ9H9Y6 RNA5SP282-201ENST00000516355 108 ntBASIC2.53□□□□□ -2
POLR1BQ9H9Y6 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.53□□□□□ -2
POLR1BQ9H9Y6 HSPE1P4-201ENST00000550617 308 ntBASIC2.53□□□□□ -2
POLR1BQ9H9Y6 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC2.53□□□□□ -2
POLR1BQ9H9Y6 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.53□□□□□ -2
POLR1BQ9H9Y6 AL138963.2-201ENST00000605137 226 ntBASIC2.53□□□□□ -2
POLR1BQ9H9Y6 AC018889.1-201ENST00000605372 397 ntBASIC2.53□□□□□ -2
POLR1BQ9H9Y6 AL133215.3-201ENST00000609801 448 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms