Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 Y_RNA.235-201ENST00000364412 102 ntBASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 Y_RNA.291-201ENST00000364886 113 ntBASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 Y_RNA.306-201ENST00000365015 102 ntBASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 Y_RNA.308-201ENST00000365043 101 ntBASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 Y_RNA.312-201ENST00000365089 102 ntBASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 Y_RNA.322-201ENST00000365151 102 ntBASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 RNU6-1280P-201ENST00000365211 107 ntBASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 MIR184-201ENST00000384962 84 ntBASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 MIR549A-201ENST00000385268 96 ntBASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 U3.19-201ENST00000390893 196 ntBASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 RNU6-918P-201ENST00000391219 106 ntBASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 MTATP6P29-201ENST00000415057 132 ntBASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 AC002075.2-201ENST00000425207 252 ntBASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 AL591419.1-201ENST00000427423 339 ntBASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 AL353743.2-202ENST00000439544 473 ntTSL 3 BASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 AL136987.2-201ENST00000457321 684 ntTSL 3 BASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 Y_RNA.650-201ENST00000459002 102 ntBASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 SNORA27.4-201ENST00000516650 95 ntBASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 Y_RNA.777-201ENST00000516982 102 ntBASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 SNORA31.23-201ENST00000517219 133 ntBASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 AC008011.1-201ENST00000545989 227 ntBASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 MIR4282-201ENST00000583613 67 ntBASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 AL451007.1-201ENST00000595491 289 ntBASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 AC005176.2-201ENST00000596933 147 ntBASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 Y_RNA.771-201ENST00000598668 102 ntBASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 AL138963.2-201ENST00000605137 226 ntBASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 RMST_8.1-201ENST00000610287 165 ntBASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 Y_RNA.789-201ENST00000622480 102 ntBASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.29□□□□□ -1.88
SEC61A2Q9H9S3 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
SEC61A2Q9H9S3 BX322639.1-202ENST00000423987 2213 ntBASIC3.28□□□□□ -1.88
SEC61A2Q9H9S3 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.28□□□□□ -1.88
SEC61A2Q9H9S3 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SEC61A2Q9H9S3 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SEC61A2Q9H9S3 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.28□□□□□ -1.88
SEC61A2Q9H9S3 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC3.28□□□□□ -1.88
SEC61A2Q9H9S3 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SEC61A2Q9H9S3 RNU6-873P-201ENST00000363833 107 ntBASIC3.28□□□□□ -1.88
SEC61A2Q9H9S3 Y_RNA.233-201ENST00000364407 101 ntBASIC3.28□□□□□ -1.88
SEC61A2Q9H9S3 RNA5SP129-201ENST00000410276 118 ntBASIC3.28□□□□□ -1.88
SEC61A2Q9H9S3 RPL19P1-201ENST00000411635 428 ntBASIC3.28□□□□□ -1.88
SEC61A2Q9H9S3 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.28□□□□□ -1.88
SEC61A2Q9H9S3 AC024067.1-201ENST00000426199 223 ntBASIC3.28□□□□□ -1.88
SEC61A2Q9H9S3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC3.28□□□□□ -1.88
SEC61A2Q9H9S3 AP000705.1-201ENST00000454567 350 ntBASIC3.28□□□□□ -1.88
SEC61A2Q9H9S3 RPL21P104-201ENST00000464143 478 ntBASIC3.28□□□□□ -1.88
SEC61A2Q9H9S3 RPL30P12-201ENST00000474666 353 ntBASIC3.28□□□□□ -1.88
SEC61A2Q9H9S3 RPS27AP10-201ENST00000496103 208 ntBASIC3.28□□□□□ -1.88
SEC61A2Q9H9S3 AC016632.1-201ENST00000503994 196 ntBASIC3.28□□□□□ -1.88
SEC61A2Q9H9S3 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC3.28□□□□□ -1.88
SEC61A2Q9H9S3 RNU6-928P-201ENST00000516876 104 ntBASIC3.28□□□□□ -1.88
SEC61A2Q9H9S3 RN7SKP289-201ENST00000517244 295 ntBASIC3.28□□□□□ -1.88
SEC61A2Q9H9S3 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.28□□□□□ -1.88
SEC61A2Q9H9S3 CR383656.8-201ENST00000549046 145 ntBASIC3.28□□□□□ -1.88
SEC61A2Q9H9S3 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC3.28□□□□□ -1.88
SEC61A2Q9H9S3 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC3.28□□□□□ -1.88
SEC61A2Q9H9S3 AC055872.1-201ENST00000570978 278 ntBASIC3.28□□□□□ -1.88
SEC61A2Q9H9S3 MIR3186-201ENST00000577404 85 ntBASIC3.28□□□□□ -1.88
SEC61A2Q9H9S3 MIR5571-201ENST00000577998 113 ntBASIC3.28□□□□□ -1.88
SEC61A2Q9H9S3 MIR5047-201ENST00000579212 100 ntBASIC3.28□□□□□ -1.88
SEC61A2Q9H9S3 MZT1P2-201ENST00000604387 248 ntBASIC3.28□□□□□ -1.88
SEC61A2Q9H9S3 AC004832.4-201ENST00000608952 331 ntBASIC3.28□□□□□ -1.88
SEC61A2Q9H9S3 AL359198.2-201ENST00000611836 194 ntBASIC3.28□□□□□ -1.88
SEC61A2Q9H9S3 KCNQ1OT1_5.1-201ENST00000621902 226 ntBASIC3.28□□□□□ -1.88
SEC61A2Q9H9S3 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.28□□□□□ -1.88
SEC61A2Q9H9S3 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.28□□□□□ -1.88
SEC61A2Q9H9S3 CACNB4-260ENST00000637762 3800 ntTSL 5 BASIC3.27□□□□□ -1.89
SEC61A2Q9H9S3 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SEC61A2Q9H9S3 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SEC61A2Q9H9S3 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.27□□□□□ -1.89
SEC61A2Q9H9S3 AL589745.1-201ENST00000421190 3336 ntTSL 5 BASIC3.27□□□□□ -1.89
SEC61A2Q9H9S3 RNU6-50P-201ENST00000362356 103 ntBASIC3.27□□□□□ -1.89
SEC61A2Q9H9S3 RNU6-1141P-201ENST00000364520 107 ntBASIC3.27□□□□□ -1.89
SEC61A2Q9H9S3 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC3.27□□□□□ -1.89
SEC61A2Q9H9S3 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.27□□□□□ -1.89
SEC61A2Q9H9S3 SNORA57.3-201ENST00000411095 141 ntBASIC3.27□□□□□ -1.89
SEC61A2Q9H9S3 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.27□□□□□ -1.89
SEC61A2Q9H9S3 AC007395.1-201ENST00000451333 677 ntBASIC3.27□□□□□ -1.89
SEC61A2Q9H9S3 AP001324.2-201ENST00000461163 319 ntBASIC3.27□□□□□ -1.89
SEC61A2Q9H9S3 AL133162.1-201ENST00000463228 453 ntBASIC3.27□□□□□ -1.89
SEC61A2Q9H9S3 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.27□□□□□ -1.89
SEC61A2Q9H9S3 RNU6-966P-201ENST00000516479 104 ntBASIC3.27□□□□□ -1.89
SEC61A2Q9H9S3 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC3.27□□□□□ -1.89
SEC61A2Q9H9S3 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.27□□□□□ -1.89
SEC61A2Q9H9S3 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC3.27□□□□□ -1.89
SEC61A2Q9H9S3 AL356157.2-201ENST00000605122 111 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 160.3 ms