Protein–RNA interactions for Protein: Q9BXA9

SALL3, Sal-like protein 3, humanhuman

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL3Q9BXA9 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
SALL3Q9BXA9 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
SALL3Q9BXA9 SNORA5B-201ENST00000363786 132 ntBASIC3.35□□□□□ -1.87
SALL3Q9BXA9 Y_RNA.214-201ENST00000364201 112 ntBASIC3.35□□□□□ -1.87
SALL3Q9BXA9 AL138827.1-201ENST00000402666 306 ntBASIC3.35□□□□□ -1.87
SALL3Q9BXA9 MIR1290-201ENST00000408735 78 ntBASIC3.35□□□□□ -1.87
SALL3Q9BXA9 RNA5SP21-201ENST00000410917 96 ntBASIC3.35□□□□□ -1.87
SALL3Q9BXA9 MTCO3P19-201ENST00000415864 321 ntBASIC3.35□□□□□ -1.87
SALL3Q9BXA9 AL356867.1-201ENST00000429623 299 ntBASIC3.35□□□□□ -1.87
SALL3Q9BXA9 PCNPP5-201ENST00000452246 481 ntBASIC3.35□□□□□ -1.87
SALL3Q9BXA9 AP002884.2-201ENST00000471647 395 ntBASIC3.35□□□□□ -1.87
SALL3Q9BXA9 HMGB3P17-201ENST00000504195 649 ntBASIC3.35□□□□□ -1.87
SALL3Q9BXA9 AC097462.2-201ENST00000504623 481 ntBASIC3.35□□□□□ -1.87
SALL3Q9BXA9 RNU6-388P-201ENST00000517012 105 ntBASIC3.35□□□□□ -1.87
SALL3Q9BXA9 RNU6-389P-201ENST00000517048 105 ntBASIC3.35□□□□□ -1.87
SALL3Q9BXA9 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.35□□□□□ -1.87
SALL3Q9BXA9 AC125232.2-201ENST00000592457 143 ntBASIC3.35□□□□□ -1.87
SALL3Q9BXA9 U6.104-201ENST00000637979 90 ntBASIC3.35□□□□□ -1.87
SALL3Q9BXA9 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.35□□□□□ -1.87
SALL3Q9BXA9 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SALL3Q9BXA9 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.87
SALL3Q9BXA9 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.34□□□□□ -1.87
SALL3Q9BXA9 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SALL3Q9BXA9 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
SALL3Q9BXA9 OR56A5-201ENST00000340110 738 ntBASIC3.34□□□□□ -1.87
SALL3Q9BXA9 RNU4-50P-201ENST00000364361 141 ntBASIC3.34□□□□□ -1.87
SALL3Q9BXA9 RNU6-384P-201ENST00000364900 104 ntBASIC3.34□□□□□ -1.87
SALL3Q9BXA9 Y_RNA.396-201ENST00000383949 103 ntBASIC3.34□□□□□ -1.87
SALL3Q9BXA9 Y_RNA.447-201ENST00000384184 113 ntBASIC3.34□□□□□ -1.87
SALL3Q9BXA9 RNU6-472P-201ENST00000384299 107 ntBASIC3.34□□□□□ -1.87
SALL3Q9BXA9 Y_RNA.552-201ENST00000384665 112 ntBASIC3.34□□□□□ -1.87
SALL3Q9BXA9 RNU6-713P-201ENST00000384761 107 ntBASIC3.34□□□□□ -1.87
SALL3Q9BXA9 SAR1AP2-201ENST00000392696 594 ntBASIC3.34□□□□□ -1.87
SALL3Q9BXA9 RNU6ATAC23P-201ENST00000408448 123 ntBASIC3.34□□□□□ -1.87
SALL3Q9BXA9 RNU6-1025P-201ENST00000410629 104 ntBASIC3.34□□□□□ -1.87
SALL3Q9BXA9 SNORD56-201ENST00000413522 71 ntBASIC3.34□□□□□ -1.87
SALL3Q9BXA9 MTCO3P8-201ENST00000453691 755 ntBASIC3.34□□□□□ -1.87
SALL3Q9BXA9 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC3.34□□□□□ -1.87
SALL3Q9BXA9 AL359273.1-201ENST00000510918 627 ntBASIC3.34□□□□□ -1.87
SALL3Q9BXA9 Y_RNA.687-201ENST00000516558 91 ntBASIC3.34□□□□□ -1.87
SALL3Q9BXA9 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.34□□□□□ -1.87
SALL3Q9BXA9 IGHV3-76-201ENST00000522465 295 ntBASIC3.34□□□□□ -1.87
SALL3Q9BXA9 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC3.34□□□□□ -1.87
SALL3Q9BXA9 AL645944.1-201ENST00000603857 493 ntBASIC3.34□□□□□ -1.87
SALL3Q9BXA9 AC123912.5-201ENST00000605470 343 ntBASIC3.34□□□□□ -1.87
SALL3Q9BXA9 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC3.34□□□□□ -1.87
SALL3Q9BXA9 MIR6733-201ENST00000635723 61 ntBASIC3.34□□□□□ -1.87
SALL3Q9BXA9 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
SALL3Q9BXA9 ZNF299P-201ENST00000406845 1804 ntBASIC3.33□□□□□ -1.88
SALL3Q9BXA9 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.33□□□□□ -1.88
SALL3Q9BXA9 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC3.33□□□□□ -1.88
SALL3Q9BXA9 RNU6-595P-201ENST00000363944 107 ntBASIC3.33□□□□□ -1.88
SALL3Q9BXA9 Y_RNA.512-201ENST00000384518 102 ntBASIC3.33□□□□□ -1.88
SALL3Q9BXA9 Y_RNA.518-201ENST00000384552 113 ntBASIC3.33□□□□□ -1.88
SALL3Q9BXA9 MIR1302-6-201ENST00000408466 90 ntBASIC3.33□□□□□ -1.88
SALL3Q9BXA9 BMS1P22-201ENST00000414726 313 ntBASIC3.33□□□□□ -1.88
SALL3Q9BXA9 Z85995.1-201ENST00000415547 335 ntBASIC3.33□□□□□ -1.88
SALL3Q9BXA9 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC3.33□□□□□ -1.88
SALL3Q9BXA9 AL627311.1-201ENST00000431514 115 ntBASIC3.33□□□□□ -1.88
SALL3Q9BXA9 AL353997.1-201ENST00000432936 108 ntBASIC3.33□□□□□ -1.88
SALL3Q9BXA9 AC097662.1-205ENST00000433324 241 ntTSL 5 BASIC3.33□□□□□ -1.88
SALL3Q9BXA9 RPL21P2-201ENST00000440049 481 ntBASIC3.33□□□□□ -1.88
SALL3Q9BXA9 SNORD127-201ENST00000458892 86 ntBASIC3.33□□□□□ -1.88
SALL3Q9BXA9 RNU6-1132P-201ENST00000459214 107 ntBASIC3.33□□□□□ -1.88
SALL3Q9BXA9 AL049874.1-201ENST00000489560 388 ntBASIC3.33□□□□□ -1.88
SALL3Q9BXA9 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC3.33□□□□□ -1.88
SALL3Q9BXA9 SNORA25.11-201ENST00000515935 105 ntBASIC3.33□□□□□ -1.88
SALL3Q9BXA9 AC100807.1-201ENST00000517640 552 ntTSL 5 BASIC3.33□□□□□ -1.88
SALL3Q9BXA9 AC109479.2-201ENST00000517842 174 ntBASIC3.33□□□□□ -1.88
SALL3Q9BXA9 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC3.33□□□□□ -1.88
SALL3Q9BXA9 AC023157.2-201ENST00000540596 141 ntBASIC3.33□□□□□ -1.88
SALL3Q9BXA9 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC3.33□□□□□ -1.88
SALL3Q9BXA9 AL122017.1-202ENST00000570612 319 ntTSL 5 BASIC3.33□□□□□ -1.88
SALL3Q9BXA9 RPL12P50-201ENST00000603116 116 ntBASIC3.33□□□□□ -1.88
SALL3Q9BXA9 MTND4LP5-201ENST00000605152 292 ntBASIC3.33□□□□□ -1.88
SALL3Q9BXA9 AP002826.1-201ENST00000608835 315 ntBASIC3.33□□□□□ -1.88
SALL3Q9BXA9 AC013412.1-201ENST00000610687 192 ntBASIC3.33□□□□□ -1.88
SALL3Q9BXA9 MIR8076-201ENST00000611401 83 ntBASIC3.33□□□□□ -1.88
SALL3Q9BXA9 AC137590.2-201ENST00000619709 240 ntBASIC3.33□□□□□ -1.88
SALL3Q9BXA9 SNORA50A-202ENST00000629536 136 ntBASIC3.33□□□□□ -1.88
SALL3Q9BXA9 OR4G2P-202ENST00000641004 1759 ntBASIC3.32□□□□□ -1.88
SALL3Q9BXA9 CUL1P1-201ENST00000509510 2425 ntBASIC3.32□□□□□ -1.88
SALL3Q9BXA9 AL359693.1-201ENST00000614959 2407 ntBASIC3.32□□□□□ -1.88
SALL3Q9BXA9 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.32□□□□□ -1.88
SALL3Q9BXA9 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SALL3Q9BXA9 Y_RNA.48-201ENST00000362710 103 ntBASIC3.32□□□□□ -1.88
SALL3Q9BXA9 RNA5SP126-201ENST00000365092 109 ntBASIC3.32□□□□□ -1.88
SALL3Q9BXA9 Y_RNA.350-201ENST00000365409 98 ntBASIC3.32□□□□□ -1.88
SALL3Q9BXA9 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
SALL3Q9BXA9 MIR493-201ENST00000385254 89 ntBASIC3.32□□□□□ -1.88
SALL3Q9BXA9 RNU6-1077P-201ENST00000410506 102 ntBASIC3.32□□□□□ -1.88
SALL3Q9BXA9 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC3.32□□□□□ -1.88
SALL3Q9BXA9 RPL27AP8-201ENST00000424277 446 ntBASIC3.32□□□□□ -1.88
SALL3Q9BXA9 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SALL3Q9BXA9 AC013470.1-201ENST00000453438 462 ntBASIC3.32□□□□□ -1.88
SALL3Q9BXA9 U8.21-201ENST00000459536 136 ntBASIC3.32□□□□□ -1.88
SALL3Q9BXA9 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.32□□□□□ -1.88
SALL3Q9BXA9 AC006600.1-201ENST00000572529 153 ntBASIC3.32□□□□□ -1.88
SALL3Q9BXA9 AC006023.1-201ENST00000603944 259 ntBASIC3.32□□□□□ -1.88
SALL3Q9BXA9 MIR3976-201ENST00000606807 139 ntBASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 102.8 ms