Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 CTSLP2-204ENST00000629029 392 ntBASIC2.03□□□□□ -2.08
SSX3Q99909 SNORD98-201ENST00000636377 67 ntBASIC2.03□□□□□ -2.08
SSX3Q99909 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.02□□□□□ -2.09
SSX3Q99909 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC2.02□□□□□ -2.09
SSX3Q99909 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
SSX3Q99909 MIRLET7G-201ENST00000362280 84 ntBASIC2.02□□□□□ -2.09
SSX3Q99909 Y_RNA.38-201ENST00000362617 102 ntBASIC2.02□□□□□ -2.09
SSX3Q99909 RNY3P3-201ENST00000363816 102 ntBASIC2.02□□□□□ -2.09
SSX3Q99909 RNU6-944P-201ENST00000364023 107 ntBASIC2.02□□□□□ -2.09
SSX3Q99909 SNORD32A-201ENST00000364805 84 ntBASIC2.02□□□□□ -2.09
SSX3Q99909 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
SSX3Q99909 RNU6-546P-201ENST00000383991 107 ntBASIC2.02□□□□□ -2.09
SSX3Q99909 RNU6-1215P-201ENST00000384441 102 ntBASIC2.02□□□□□ -2.09
SSX3Q99909 RNU4-26P-201ENST00000410270 107 ntBASIC2.02□□□□□ -2.09
SSX3Q99909 RNA5SP450-201ENST00000411206 102 ntBASIC2.02□□□□□ -2.09
SSX3Q99909 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC2.02□□□□□ -2.09
SSX3Q99909 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC2.02□□□□□ -2.09
SSX3Q99909 RPL32P28-201ENST00000443577 397 ntBASIC2.02□□□□□ -2.09
SSX3Q99909 RNU6-1037P-201ENST00000459571 107 ntBASIC2.02□□□□□ -2.09
SSX3Q99909 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC2.02□□□□□ -2.09
SSX3Q99909 AC083904.1-201ENST00000487828 231 ntBASIC2.02□□□□□ -2.09
SSX3Q99909 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC2.02□□□□□ -2.09
SSX3Q99909 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC2.02□□□□□ -2.09
SSX3Q99909 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC2.02□□□□□ -2.09
SSX3Q99909 AC104576.1-201ENST00000524225 88 ntBASIC2.02□□□□□ -2.09
SSX3Q99909 MTND1P35-201ENST00000526739 508 ntBASIC2.02□□□□□ -2.09
SSX3Q99909 AC109635.3-201ENST00000529536 185 ntBASIC2.02□□□□□ -2.09
SSX3Q99909 MIR3136-201ENST00000583498 78 ntBASIC2.02□□□□□ -2.09
SSX3Q99909 AC008749.1-201ENST00000597650 306 ntBASIC2.02□□□□□ -2.09
SSX3Q99909 SNRPGP17-201ENST00000603780 214 ntBASIC2.02□□□□□ -2.09
SSX3Q99909 AP001836.1-201ENST00000604675 523 ntBASIC2.02□□□□□ -2.09
SSX3Q99909 AL034555.1-201ENST00000604816 211 ntBASIC2.02□□□□□ -2.09
SSX3Q99909 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
SSX3Q99909 SDR42E1P4-201ENST00000620894 481 ntBASIC2.02□□□□□ -2.09
SSX3Q99909 PTPRQ-209ENST00000616559 8165 ntTSL 5 BASIC2.02□□□□□ -2.09
SSX3Q99909 KPNA2P1-201ENST00000458289 1591 ntBASIC2.02□□□□□ -2.09
SSX3Q99909 CENPCP1-201ENST00000533085 2578 ntBASIC2.02□□□□□ -2.09
SSX3Q99909 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.01□□□□□ -2.09
SSX3Q99909 RNU6-451P-201ENST00000362921 107 ntBASIC2.01□□□□□ -2.09
SSX3Q99909 Y_RNA.167-201ENST00000363735 109 ntBASIC2.01□□□□□ -2.09
SSX3Q99909 RNU6-522P-201ENST00000364497 107 ntBASIC2.01□□□□□ -2.09
SSX3Q99909 Y_RNA.516-201ENST00000384541 124 ntBASIC2.01□□□□□ -2.09
SSX3Q99909 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
SSX3Q99909 AL512604.1-201ENST00000404812 257 ntBASIC2.01□□□□□ -2.09
SSX3Q99909 Y_RNA.597-201ENST00000410463 100 ntBASIC2.01□□□□□ -2.09
SSX3Q99909 AL590135.1-201ENST00000422215 156 ntBASIC2.01□□□□□ -2.09
SSX3Q99909 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC2.01□□□□□ -2.09
SSX3Q99909 AC019205.3-201ENST00000424573 156 ntBASIC2.01□□□□□ -2.09
SSX3Q99909 AL359672.1-201ENST00000442302 409 ntBASIC2.01□□□□□ -2.09
SSX3Q99909 AC016700.2-201ENST00000446011 156 ntBASIC2.01□□□□□ -2.09
SSX3Q99909 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC2.01□□□□□ -2.09
SSX3Q99909 AC117394.2-201ENST00000487827 323 ntTSL 3 BASIC2.01□□□□□ -2.09
SSX3Q99909 AC015911.1-201ENST00000495111 156 ntBASIC2.01□□□□□ -2.09
SSX3Q99909 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.01□□□□□ -2.09
SSX3Q99909 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC2.01□□□□□ -2.09
SSX3Q99909 AP002770.2-201ENST00000543613 532 ntBASIC2.01□□□□□ -2.09
SSX3Q99909 AC007375.1-201ENST00000554513 578 ntBASIC2.01□□□□□ -2.09
SSX3Q99909 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC2.01□□□□□ -2.09
SSX3Q99909 TPRKBP2-201ENST00000565969 475 ntBASIC2.01□□□□□ -2.09
SSX3Q99909 AC018889.1-201ENST00000605372 397 ntBASIC2.01□□□□□ -2.09
SSX3Q99909 AC098657.3-201ENST00000620434 263 ntBASIC2.01□□□□□ -2.09
SSX3Q99909 ZEB2_AS1_1.1-201ENST00000621504 128 ntBASIC2.01□□□□□ -2.09
SSX3Q99909 AC139792.2-201ENST00000624218 587 ntBASIC2.01□□□□□ -2.09
SSX3Q99909 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC2.01□□□□□ -2.09
SSX3Q99909 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC2.01□□□□□ -2.09
SSX3Q99909 OGN-202ENST00000375561 2743 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
SSX3Q99909 AP000560.1-201ENST00000624150 1937 ntBASIC2.01□□□□□ -2.09
SSX3Q99909 MTND4P1-201ENST00000457501 1466 ntBASIC2.01□□□□□ -2.09
SSX3Q99909 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2□□□□□ -2.09
SSX3Q99909 AC121333.1-201ENST00000567488 2709 ntBASIC2□□□□□ -2.09
SSX3Q99909 CSNK1G3-202ENST00000360683 4047 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
SSX3Q99909 AC069528.2-201ENST00000624849 1991 ntBASIC2□□□□□ -2.09
SSX3Q99909 ZNF720P1-201ENST00000562403 1939 ntBASIC2□□□□□ -2.09
SSX3Q99909 RNU4-56P-201ENST00000364700 142 ntBASIC2□□□□□ -2.09
SSX3Q99909 RNA5SP126-201ENST00000365092 109 ntBASIC2□□□□□ -2.09
SSX3Q99909 Y_RNA.373-201ENST00000365600 103 ntBASIC2□□□□□ -2.09
SSX3Q99909 RNU6-1329P-201ENST00000365664 107 ntBASIC2□□□□□ -2.09
SSX3Q99909 RNU6-214P-201ENST00000384130 107 ntBASIC2□□□□□ -2.09
SSX3Q99909 Y_RNA.554-201ENST00000384672 102 ntBASIC2□□□□□ -2.09
SSX3Q99909 RN7SKP61-201ENST00000410642 295 ntBASIC2□□□□□ -2.09
SSX3Q99909 AC078809.1-201ENST00000427601 140 ntBASIC2□□□□□ -2.09
SSX3Q99909 MRPS10P2-201ENST00000431226 381 ntBASIC2□□□□□ -2.09
SSX3Q99909 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC2□□□□□ -2.09
SSX3Q99909 AC008628.2-201ENST00000502605 298 ntBASIC2□□□□□ -2.09
SSX3Q99909 AC016632.1-201ENST00000503994 196 ntBASIC2□□□□□ -2.09
SSX3Q99909 RPL39P5-202ENST00000512505 151 ntBASIC2□□□□□ -2.09
SSX3Q99909 RNU6-965P-201ENST00000516721 96 ntBASIC2□□□□□ -2.09
SSX3Q99909 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC2□□□□□ -2.09
SSX3Q99909 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2□□□□□ -2.09
SSX3Q99909 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC2□□□□□ -2.09
SSX3Q99909 AC022616.8-201ENST00000533569 253 ntBASIC2□□□□□ -2.09
SSX3Q99909 AC002984.1-201ENST00000591692 448 ntBASIC2□□□□□ -2.09
SSX3Q99909 BNIP3P25-201ENST00000596023 559 ntBASIC2□□□□□ -2.09
SSX3Q99909 AC092070.3-201ENST00000596041 337 ntTSL 3 BASIC2□□□□□ -2.09
SSX3Q99909 AC064836.2-201ENST00000609491 462 ntBASIC2□□□□□ -2.09
SSX3Q99909 U4.5-201ENST00000617137 123 ntBASIC2□□□□□ -2.09
SSX3Q99909 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
SSX3Q99909 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.99□□□□□ -2.09
SSX3Q99909 AC092268.1-201ENST00000342691 405 ntBASIC1.99□□□□□ -2.09
SSX3Q99909 RNU4-12P-201ENST00000365233 139 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 145.7 ms