Protein–RNA interactions for Protein: Q99715

COL12A1, Collagen alpha-1(XII) chain, humanhuman

Predictions only

Length 3,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1Q99715 AC006199.1-201ENST00000548728 219 ntBASIC-0.29□□□□□ -2.46
COL12A1Q99715 MIR5094-201ENST00000578766 85 ntBASIC-0.29□□□□□ -2.46
COL12A1Q99715 AC012213.4-201ENST00000606457 354 ntBASIC-0.29□□□□□ -2.46
COL12A1Q99715 AL357080.1-201ENST00000617394 239 ntBASIC-0.29□□□□□ -2.46
COL12A1Q99715 MIR6828-201ENST00000636181 60 ntBASIC-0.29□□□□□ -2.46
COL12A1Q99715 SNORA12-201ENST00000391162 147 ntBASIC-0.29□□□□□ -2.46
COL12A1Q99715 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC-0.29□□□□□ -2.46
COL12A1Q99715 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC-0.29□□□□□ -2.46
COL12A1Q99715 RNU6-1054P-201ENST00000411293 104 ntBASIC-0.29□□□□□ -2.46
COL12A1Q99715 USP9YP19-201ENST00000412165 485 ntBASIC-0.29□□□□□ -2.46
COL12A1Q99715 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC-0.29□□□□□ -2.46
COL12A1Q99715 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC-0.29□□□□□ -2.46
COL12A1Q99715 MTND1P9-201ENST00000453775 944 ntBASIC-0.29□□□□□ -2.46
COL12A1Q99715 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC-0.29□□□□□ -2.46
COL12A1Q99715 AC107297.1-201ENST00000459991 176 ntBASIC-0.29□□□□□ -2.46
COL12A1Q99715 AC111000.5-201ENST00000506559 1178 ntBASIC-0.29□□□□□ -2.46
COL12A1Q99715 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC-0.29□□□□□ -2.46
COL12A1Q99715 MDM2-233ENST00000545204 398 ntTSL 5 BASIC-0.29□□□□□ -2.46
COL12A1Q99715 RPL23AP91-201ENST00000569211 455 ntBASIC-0.29□□□□□ -2.46
COL12A1Q99715 ANKRD36BP2-206ENST00000575193 1245 ntBASIC-0.29□□□□□ -2.46
COL12A1Q99715 BNIP3P27-201ENST00000599991 412 ntBASIC-0.29□□□□□ -2.46
COL12A1Q99715 AL360219.1-201ENST00000610230 366 ntBASIC-0.29□□□□□ -2.46
COL12A1Q99715 AC006157.1-201ENST00000611750 366 ntBASIC-0.29□□□□□ -2.46
COL12A1Q99715 MIR196A1-201ENST00000388006 70 ntBASIC-0.3□□□□□ -2.46
COL12A1Q99715 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC-0.3□□□□□ -2.46
COL12A1Q99715 ZNF736P6Y-201ENST00000447526 1213 ntBASIC-0.3□□□□□ -2.46
COL12A1Q99715 RNU6-165P-201ENST00000517170 99 ntBASIC-0.3□□□□□ -2.46
COL12A1Q99715 COPS8P3-201ENST00000526024 482 ntBASIC-0.3□□□□□ -2.46
COL12A1Q99715 AC064807.4-201ENST00000607201 407 ntBASIC-0.3□□□□□ -2.46
COL12A1Q99715 AC007349.4-201ENST00000608114 532 ntBASIC-0.3□□□□□ -2.46
COL12A1Q99715 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC-0.3□□□□□ -2.46
COL12A1Q99715 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC-0.3□□□□□ -2.46
COL12A1Q99715 MIR145-201ENST00000384967 88 ntBASIC-0.3□□□□□ -2.46
COL12A1Q99715 MLLT10P1-201ENST00000418346 262 ntBASIC-0.3□□□□□ -2.46
COL12A1Q99715 ARL5AP1-201ENST00000418991 388 ntBASIC-0.3□□□□□ -2.46
COL12A1Q99715 AL512658.1-201ENST00000449072 533 ntTSL 3 BASIC-0.3□□□□□ -2.46
COL12A1Q99715 AC048334.1-201ENST00000477975 159 ntBASIC-0.3□□□□□ -2.46
COL12A1Q99715 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC-0.3□□□□□ -2.46
COL12A1Q99715 AC010587.2-201ENST00000511727 448 ntBASIC-0.3□□□□□ -2.46
COL12A1Q99715 SUMO2P16-201ENST00000519475 264 ntBASIC-0.3□□□□□ -2.46
COL12A1Q99715 AC010376.1-201ENST00000522101 334 ntBASIC-0.3□□□□□ -2.46
COL12A1Q99715 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC-0.3□□□□□ -2.46
COL12A1Q99715 Y_RNA.124-201ENST00000363339 93 ntBASIC-0.31□□□□□ -2.46
COL12A1Q99715 BTF3P8-201ENST00000414577 526 ntBASIC-0.31□□□□□ -2.46
COL12A1Q99715 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC-0.31□□□□□ -2.46
COL12A1Q99715 MTND1P20-201ENST00000430341 950 ntBASIC-0.31□□□□□ -2.46
COL12A1Q99715 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC-0.31□□□□□ -2.46
COL12A1Q99715 BUD31P2-201ENST00000449374 300 ntBASIC-0.31□□□□□ -2.46
COL12A1Q99715 AC233266.1-201ENST00000454518 96 ntBASIC-0.31□□□□□ -2.46
COL12A1Q99715 AL049714.1-201ENST00000466686 347 ntBASIC-0.31□□□□□ -2.46
COL12A1Q99715 CFLAR-AS1-202ENST00000474886 223 ntTSL 3 BASIC-0.31□□□□□ -2.46
COL12A1Q99715 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC-0.31□□□□□ -2.46
COL12A1Q99715 AC092953.2-201ENST00000608000 699 ntBASIC-0.31□□□□□ -2.46
COL12A1Q99715 AC242852.1-201ENST00000612151 96 ntBASIC-0.31□□□□□ -2.46
COL12A1Q99715 AC244015.1-201ENST00000622301 99 ntBASIC-0.31□□□□□ -2.46
COL12A1Q99715 Y_RNA.555-201ENST00000384673 110 ntBASIC-0.31□□□□□ -2.46
COL12A1Q99715 RNA5SP216-201ENST00000516111 123 ntBASIC-0.31□□□□□ -2.46
COL12A1Q99715 AC011921.3-201ENST00000605540 361 ntBASIC-0.31□□□□□ -2.46
COL12A1Q99715 MIR3529-201ENST00000637713 78 ntBASIC-0.31□□□□□ -2.46
COL12A1Q99715 SNORD114-14-201ENST00000362723 75 ntBASIC-0.32□□□□□ -2.46
COL12A1Q99715 SNORD14D-201ENST00000384390 87 ntBASIC-0.32□□□□□ -2.46
COL12A1Q99715 RNU6-950P-201ENST00000384651 107 ntBASIC-0.32□□□□□ -2.46
COL12A1Q99715 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC-0.32□□□□□ -2.46
COL12A1Q99715 AL161935.2-201ENST00000414627 60 ntBASIC-0.32□□□□□ -2.46
COL12A1Q99715 AL445259.1-203ENST00000427828 251 ntTSL 3 BASIC-0.32□□□□□ -2.46
COL12A1Q99715 AL357094.1-201ENST00000603845 844 ntBASIC-0.32□□□□□ -2.46
COL12A1Q99715 AL713998.2-201ENST00000604538 1198 ntBASIC-0.32□□□□□ -2.46
COL12A1Q99715 AC009237.15-201ENST00000610252 501 ntBASIC-0.32□□□□□ -2.46
COL12A1Q99715 MIR8076-201ENST00000611401 83 ntBASIC-0.32□□□□□ -2.46
COL12A1Q99715 SNORD114-25-201ENST00000363742 72 ntBASIC-0.32□□□□□ -2.46
COL12A1Q99715 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.32□□□□□ -2.46
COL12A1Q99715 CBX3P9-201ENST00000402326 552 ntBASIC-0.32□□□□□ -2.46
COL12A1Q99715 AL355796.1-201ENST00000406706 323 ntBASIC-0.32□□□□□ -2.46
COL12A1Q99715 SSR1P2-201ENST00000415208 787 ntBASIC-0.32□□□□□ -2.46
COL12A1Q99715 AC024082.2-201ENST00000434771 238 ntBASIC-0.32□□□□□ -2.46
COL12A1Q99715 AC108488.2-201ENST00000438485 421 ntAPPRIS P1 TSL 3 BASIC-0.32□□□□□ -2.46
COL12A1Q99715 Z82210.1-201ENST00000440037 231 ntBASIC-0.32□□□□□ -2.46
COL12A1Q99715 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC-0.32□□□□□ -2.46
COL12A1Q99715 AC022690.2-201ENST00000525673 589 ntTSL 3 BASIC-0.32□□□□□ -2.46
COL12A1Q99715 BNIP3P39-201ENST00000601077 554 ntBASIC-0.32□□□□□ -2.46
COL12A1Q99715 Y_RNA.436-201ENST00000384097 102 ntBASIC-0.32□□□□□ -2.46
COL12A1Q99715 SNX2P2-201ENST00000424553 323 ntBASIC-0.32□□□□□ -2.46
COL12A1Q99715 TMSB4XP1-201ENST00000424567 135 ntBASIC-0.32□□□□□ -2.46
COL12A1Q99715 AC244098.3-201ENST00000424803 96 ntBASIC-0.32□□□□□ -2.46
COL12A1Q99715 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC-0.32□□□□□ -2.46
COL12A1Q99715 AC093423.2-201ENST00000429074 437 ntTSL 3 BASIC-0.32□□□□□ -2.46
COL12A1Q99715 AC002381.1-201ENST00000447049 280 ntBASIC-0.32□□□□□ -2.46
COL12A1Q99715 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC-0.32□□□□□ -2.46
COL12A1Q99715 AC024940.5-201ENST00000622889 474 ntBASIC-0.32□□□□□ -2.46
COL12A1Q99715 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC-0.32□□□□□ -2.46
COL12A1Q99715 AL138713.1-201ENST00000624026 2130 ntBASIC-0.33□□□□□ -2.46
COL12A1Q99715 RNU6-1079P-201ENST00000362861 110 ntBASIC-0.33□□□□□ -2.46
COL12A1Q99715 Y_RNA.135-201ENST00000363439 95 ntBASIC-0.33□□□□□ -2.46
COL12A1Q99715 SNORA25B-201ENST00000365507 128 ntBASIC-0.33□□□□□ -2.46
COL12A1Q99715 MIR514A1-201ENST00000385133 98 ntBASIC-0.33□□□□□ -2.46
COL12A1Q99715 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC-0.33□□□□□ -2.46
COL12A1Q99715 RNU6-233P-201ENST00000410845 141 ntBASIC-0.33□□□□□ -2.46
COL12A1Q99715 MTND4P32-201ENST00000437189 1237 ntBASIC-0.33□□□□□ -2.46
COL12A1Q99715 AL031313.1-201ENST00000448435 256 ntBASIC-0.33□□□□□ -2.46
COL12A1Q99715 AC113410.1-201ENST00000505029 247 ntBASIC-0.33□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms