Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 RNU6-254P-201ENST00000363377 107 ntBASIC1.97□□□□□ -2.09
RAB40CQ96S21 RNU4-56P-201ENST00000364700 142 ntBASIC1.97□□□□□ -2.09
RAB40CQ96S21 RNU6-546P-201ENST00000383991 107 ntBASIC1.97□□□□□ -2.09
RAB40CQ96S21 Y_RNA.530-201ENST00000384587 101 ntBASIC1.97□□□□□ -2.09
RAB40CQ96S21 AL360182.1-201ENST00000397433 468 ntBASIC1.97□□□□□ -2.09
RAB40CQ96S21 Y_RNA.597-201ENST00000410463 100 ntBASIC1.97□□□□□ -2.09
RAB40CQ96S21 RNU2-32P-201ENST00000411193 191 ntBASIC1.97□□□□□ -2.09
RAB40CQ96S21 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC1.97□□□□□ -2.09
RAB40CQ96S21 UBE2V1P4-201ENST00000425374 344 ntBASIC1.97□□□□□ -2.09
RAB40CQ96S21 LINC01675-201ENST00000426519 701 ntTSL 3 BASIC1.97□□□□□ -2.09
RAB40CQ96S21 AL133396.1-201ENST00000432048 687 ntBASIC1.97□□□□□ -2.09
RAB40CQ96S21 AC025750.2-201ENST00000442609 450 ntBASIC1.97□□□□□ -2.09
RAB40CQ96S21 AMD1P1-201ENST00000457220 922 ntBASIC1.97□□□□□ -2.09
RAB40CQ96S21 U8.21-201ENST00000459536 136 ntBASIC1.97□□□□□ -2.09
RAB40CQ96S21 AC092989.1-201ENST00000481235 277 ntBASIC1.97□□□□□ -2.09
RAB40CQ96S21 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC1.97□□□□□ -2.09
RAB40CQ96S21 AC007375.1-201ENST00000554513 578 ntBASIC1.97□□□□□ -2.09
RAB40CQ96S21 AC100830.2-201ENST00000581636 240 ntBASIC1.97□□□□□ -2.09
RAB40CQ96S21 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC1.97□□□□□ -2.09
RAB40CQ96S21 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC1.97□□□□□ -2.09
RAB40CQ96S21 AC069528.2-201ENST00000624849 1991 ntBASIC1.97□□□□□ -2.09
RAB40CQ96S21 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
RAB40CQ96S21 AC007336.1-201ENST00000576365 3828 ntBASIC1.97□□□□□ -2.09
RAB40CQ96S21 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
RAB40CQ96S21 MIR21-201ENST00000362134 72 ntBASIC1.96□□□□□ -2.1
RAB40CQ96S21 RNU6-1159P-201ENST00000362933 107 ntBASIC1.96□□□□□ -2.1
RAB40CQ96S21 Y_RNA.100-201ENST00000363141 102 ntBASIC1.96□□□□□ -2.1
RAB40CQ96S21 SNORA80A-201ENST00000363922 136 ntBASIC1.96□□□□□ -2.1
RAB40CQ96S21 RNU6-1317P-201ENST00000364582 104 ntBASIC1.96□□□□□ -2.1
RAB40CQ96S21 RNU1-51P-201ENST00000365345 176 ntBASIC1.96□□□□□ -2.1
RAB40CQ96S21 RNU6-128P-201ENST00000383976 107 ntBASIC1.96□□□□□ -2.1
RAB40CQ96S21 RNU6-142P-201ENST00000384019 107 ntBASIC1.96□□□□□ -2.1
RAB40CQ96S21 Y_RNA.504-201ENST00000384481 104 ntBASIC1.96□□□□□ -2.1
RAB40CQ96S21 BTF3L4P2-201ENST00000392798 346 ntBASIC1.96□□□□□ -2.1
RAB40CQ96S21 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.96□□□□□ -2.1
RAB40CQ96S21 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC1.96□□□□□ -2.1
RAB40CQ96S21 TRBV25OR9-2-201ENST00000438417 374 ntBASIC1.96□□□□□ -2.1
RAB40CQ96S21 AL354949.1-201ENST00000446438 170 ntTSL 2 BASIC1.96□□□□□ -2.1
RAB40CQ96S21 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC1.96□□□□□ -2.1
RAB40CQ96S21 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC1.96□□□□□ -2.1
RAB40CQ96S21 SNORD109B-201ENST00000458961 67 ntBASIC1.96□□□□□ -2.1
RAB40CQ96S21 SNORD109A-201ENST00000459128 67 ntBASIC1.96□□□□□ -2.1
RAB40CQ96S21 AC007547.1-201ENST00000462177 490 ntBASIC1.96□□□□□ -2.1
RAB40CQ96S21 RPL9P9-202ENST00000466501 579 ntBASIC1.96□□□□□ -2.1
RAB40CQ96S21 RPS27P21-201ENST00000486977 252 ntBASIC1.96□□□□□ -2.1
RAB40CQ96S21 TRBVA-201ENST00000498804 316 ntBASIC1.96□□□□□ -2.1
RAB40CQ96S21 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC1.96□□□□□ -2.1
RAB40CQ96S21 AC011352.1-201ENST00000512300 793 ntBASIC1.96□□□□□ -2.1
RAB40CQ96S21 AC025465.4-201ENST00000513422 638 ntBASIC1.96□□□□□ -2.1
RAB40CQ96S21 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC1.96□□□□□ -2.1
RAB40CQ96S21 RNU6-667P-201ENST00000517186 102 ntBASIC1.96□□□□□ -2.1
RAB40CQ96S21 AC026371.1-201ENST00000551867 419 ntBASIC1.96□□□□□ -2.1
RAB40CQ96S21 SCOCP1-201ENST00000554676 349 ntBASIC1.96□□□□□ -2.1
RAB40CQ96S21 EIF4BP1-201ENST00000554881 351 ntBASIC1.96□□□□□ -2.1
RAB40CQ96S21 AC067747.1-201ENST00000608026 250 ntBASIC1.96□□□□□ -2.1
RAB40CQ96S21 AC022202.1-201ENST00000613515 211 ntBASIC1.96□□□□□ -2.1
RAB40CQ96S21 MIR3662-201ENST00000637030 95 ntBASIC1.96□□□□□ -2.1
RAB40CQ96S21 AC008555.8-201ENST00000623602 2168 ntBASIC1.96□□□□□ -2.1
RAB40CQ96S21 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
RAB40CQ96S21 TMEM232-201ENST00000455884 2501 ntAPPRIS P2 TSL 2 BASIC1.95□□□□□ -2.1
RAB40CQ96S21 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
RAB40CQ96S21 RNU4-15P-201ENST00000362613 141 ntBASIC1.95□□□□□ -2.1
RAB40CQ96S21 RNU6-227P-201ENST00000362865 103 ntBASIC1.95□□□□□ -2.1
RAB40CQ96S21 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
RAB40CQ96S21 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC1.95□□□□□ -2.1
RAB40CQ96S21 SNORA26.3-201ENST00000391119 136 ntBASIC1.95□□□□□ -2.1
RAB40CQ96S21 RNA5SP118-201ENST00000410385 109 ntBASIC1.95□□□□□ -2.1
RAB40CQ96S21 FCF1P9-201ENST00000412546 282 ntBASIC1.95□□□□□ -2.1
RAB40CQ96S21 MTND3P9-201ENST00000429526 346 ntBASIC1.95□□□□□ -2.1
RAB40CQ96S21 MTND1P4-201ENST00000435196 415 ntBASIC1.95□□□□□ -2.1
RAB40CQ96S21 AL603839.2-201ENST00000437060 546 ntTSL 5 BASIC1.95□□□□□ -2.1
RAB40CQ96S21 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC1.95□□□□□ -2.1
RAB40CQ96S21 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC1.95□□□□□ -2.1
RAB40CQ96S21 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC1.95□□□□□ -2.1
RAB40CQ96S21 AL137159.1-201ENST00000452808 512 ntBASIC1.95□□□□□ -2.1
RAB40CQ96S21 NDUFAF4P4-201ENST00000454883 502 ntBASIC1.95□□□□□ -2.1
RAB40CQ96S21 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC1.95□□□□□ -2.1
RAB40CQ96S21 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC1.95□□□□□ -2.1
RAB40CQ96S21 RNU7-66P-201ENST00000459469 62 ntBASIC1.95□□□□□ -2.1
RAB40CQ96S21 AC145146.1-201ENST00000496370 254 ntBASIC1.95□□□□□ -2.1
RAB40CQ96S21 AC082651.2-201ENST00000496833 166 ntBASIC1.95□□□□□ -2.1
RAB40CQ96S21 MTCYBP18-201ENST00000501056 747 ntBASIC1.95□□□□□ -2.1
RAB40CQ96S21 AC004052.1-202ENST00000505680 516 ntTSL 3 BASIC1.95□□□□□ -2.1
RAB40CQ96S21 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.95□□□□□ -2.1
RAB40CQ96S21 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC1.95□□□□□ -2.1
RAB40CQ96S21 FAM206BP-201ENST00000510179 541 ntBASIC1.95□□□□□ -2.1
RAB40CQ96S21 RNU6-965P-201ENST00000516721 96 ntBASIC1.95□□□□□ -2.1
RAB40CQ96S21 AP000889.2-201ENST00000532684 490 ntBASIC1.95□□□□□ -2.1
RAB40CQ96S21 AC022616.8-201ENST00000533569 253 ntBASIC1.95□□□□□ -2.1
RAB40CQ96S21 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC1.95□□□□□ -2.1
RAB40CQ96S21 AC018630.3-201ENST00000542637 96 ntBASIC1.95□□□□□ -2.1
RAB40CQ96S21 AC025917.1-202ENST00000566344 635 ntTSL 5 BASIC1.95□□□□□ -2.1
RAB40CQ96S21 AL033523.1-201ENST00000605153 153 ntBASIC1.95□□□□□ -2.1
RAB40CQ96S21 SDR42E1P4-201ENST00000620894 481 ntBASIC1.95□□□□□ -2.1
RAB40CQ96S21 AC090617.10-201ENST00000624308 134 ntBASIC1.95□□□□□ -2.1
RAB40CQ96S21 Clostridiales-1.3-201ENST00000637703 147 ntBASIC1.95□□□□□ -2.1
RAB40CQ96S21 AC009541.1-201ENST00000438279 2662 ntBASIC1.95□□□□□ -2.1
RAB40CQ96S21 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
RAB40CQ96S21 MT-ND1-201ENST00000361390 956 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
RAB40CQ96S21 RNU6-859P-201ENST00000362728 107 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 168.2 ms